DK947369 |
Clone id |
YMU02A01NGRL0015_K18 |
Library |
YMU02 |
Length |
578 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_K18. 5' end sequence. |
Accession |
DK947369 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL133Contig1 |
Sequence |
GTAAGAATCAAAGAGTCGACACTTGGCTTCCACAAGACGACGAGTTGGAATCAGTACACT CATTTGCAGCCCTTGAACTGATTCGTGAGCATTTGAATCTTGTTTTGGGTGGAAGAGGTA GCGCAGATACCACCGACCAAAAGTCGACAGCCCAAATTAGCAAGCTACGCATGGGTCGTG CCTATGCGGCTTCTGCAGTCTATGGCTATTTCATCAGAAGGGTTGATAAGCGGTTTCAGC TCGAGAAGACCATAGCAAATTCTACAGCTCAGCTTATTGAGATGGAGCGCACACACATGT CAGAACGAGGGAATGCAGATCACAATGACGATGTATGTGAGTCTGAAAAAGCAGAAGAAG TAACGGCCTTAGTTTTGAGGTCCGAGTCCAAACAAGTGGAGAGTAGTACTAAGGCAGGCA GGCACATGGGGATGTCATCAGGTCGGCTCAGGACTTATGTGATGTCCTTCGATCAAAAGA CATTGCAGCGCTATGCAAATTTGAGGTCGAAAGAAAGTGCAAGTGTGATTGAAAGACACA CAGAAGCCCTTTTTGGTAAACCAGAGATAAAAATCACG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8LBP4 |
Definition |
sp|Q8LBP4|ALB3_ARATH Inner membrane protein ALBINO3, chloroplastic OS=Arabidopsis thaliana |
Align length |
105 |
Score (bit) |
32.3 |
E-value |
1.8 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PIE4 |
Definition |
tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
189 |
Score (bit) |
154.0 |
E-value |
4.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947369|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0015_K18, 5' (578 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 154 4e-36 tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 154 4e-36 tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 152 1e-35 tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 147 5e-34 tr|Q9AT51|Q9AT51_BRANA Putative uncharacterized protein (Fragmen... 145 2e-33 tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 145 2e-33 tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 144 3e-33 tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 144 3e-33 tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 144 3e-33 tr|Q14K79|Q14K79_PLAAC Putative uncharacterized protein (Fragmen... 144 5e-33 tr|B8LKC1|B8LKC1_PICSI Putative uncharacterized protein OS=Picea... 142 2e-32 tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 137 4e-31 tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 132 1e-29 tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 132 1e-29 tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 132 1e-29 tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 132 1e-29 tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 132 2e-29 tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 131 2e-29 tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 128 3e-28 tr|A5AE17|A5AE17_VITVI Putative uncharacterized protein OS=Vitis... 128 3e-28 tr|Q9FVR1|Q9FVR1_ARATH Putative uncharacterized protein F3C3.6 (... 119 9e-26 tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 117 5e-25 tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 117 5e-25 tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 117 5e-25 tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 113 9e-24 tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 110 4e-23 tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 108 2e-22 tr|B6TD75|B6TD75_MAIZE Putative uncharacterized protein OS=Zea m... 99 1e-19 tr|B4FPS1|B4FPS1_MAIZE Putative uncharacterized protein OS=Zea m... 99 1e-19 tr|Q2R4Y4|Q2R4Y4_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 95 3e-18
>tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 417
Score = 154 bits (388), Expect = 4e-36 Identities = 91/189 (48%), Positives = 117/189 (61%) Frame = +3
Query: 12 RVDTWLPQDDELESVHSFAALELIREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAA 191 +VDTW QD++LE +HS A E+I+ HL L+LG R D + AQISKLR+G+ YAA Sbjct: 189 QVDTWPSQDEKLEQLHSPEAYEMIQNHLTLILGNR----VGDSTAVAQISKLRIGQVYAA 244
Query: 192 SAVYGYFIRRVDKRFQLEKTIANSTAQLIEMERTHMSERGNADHNDDVCESEKAEEVTAL 371 S +YGYF++RVD+RFQLEKT+ + E E G DV + AL Sbjct: 245 SVMYGYFLKRVDQRFQLEKTMKILPNGVDETESDIHKAVGQ-----DVKPGGRGLSYQAL 299
Query: 372 VLRSESKQVESSTKAGRHMGMSSGRLRTYVMSFDQKTLQRYANLRSKESASVIERHTEAL 551 E+ S H G+ + RLR YVMSFD +TLQRYA +RSKE+ S+IE+HTEAL Sbjct: 300 SSHPEAISGGISPGGFGH-GLKASRLRNYVMSFDAETLQRYATIRSKEAVSIIEKHTEAL 358
Query: 552 FGKPEIKIT 578 FG+PEI IT Sbjct: 359 FGRPEIVIT 367
>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006608001 PE=4 SV=1 Length = 362
Score = 154 bits (388), Expect = 4e-36 Identities = 90/195 (46%), Positives = 120/195 (61%), Gaps = 4/195 (2%) Frame = +3
Query: 6 NQRVDTWLPQDDELESVHSFAALELIREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAY 185 + RVDTW QD +LE +HS A E+I+ HL L+LG R D S AQISKLR+G+ Y Sbjct: 130 SDRVDTWPSQDGKLEQLHSPEAYEMIQNHLALILGNR----LGDSTSVAQISKLRVGQVY 185
Query: 186 AASAVYGYFIRRVDKRFQLEKTIANSTAQLIEMERTHMSE----RGNADHNDDVCESEKA 353 AAS +YGYF++RVD+RFQLEKT+ ++ ++ + E + +DD ++ K+ Sbjct: 186 AASVMYGYFLKRVDQRFQLEKTM-KILPHALDGDKGSVQEALWDKMTPSGSDDSVQTVKS 244
Query: 354 EEVTALVLRSESKQVESSTKAGRHMGMSSGRLRTYVMSFDQKTLQRYANLRSKESASVIE 533 S T G G+ RLR YVMSFD +TLQRYA +RSKE+ S+IE Sbjct: 245 HPEV-------SSWAGGFTPGGFGHGIKPSRLRNYVMSFDAETLQRYATIRSKEAVSIIE 297
Query: 534 RHTEALFGKPEIKIT 578 +HTEALFG+PEI IT Sbjct: 298 KHTEALFGRPEIIIT 312
>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 434
Score = 152 bits (385), Expect = 1e-35 Identities = 85/191 (44%), Positives = 120/191 (62%), Gaps = 3/191 (1%) Frame = +3
Query: 12 RVDTWLPQDDELESVHSFAALELIREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAA 191 ++DTW QD +LE VHS A E+I+ HL+LVLG R D S AQISKLR+G+ YAA Sbjct: 199 QIDTWPKQDHKLEGVHSSEAFEMIKNHLSLVLGNR----LLDSSSIAQISKLRVGQVYAA 254
Query: 192 SAVYGYFIRRVDKRFQLEKTIANSTAQLIEMERTHMSERGNADHNDDVCESEKAEEVTAL 371 S +YGYF+RRVD+RFQLEK++ + L E + ++ + + +V + Sbjct: 255 SVMYGYFLRRVDQRFQLEKSMKTLPSGLNEESDAEQTLGSDSKTKGEFQTRYSSPQVASA 314
Query: 372 VLRSESKQVE---SSTKAGRHMGMSSGRLRTYVMSFDQKTLQRYANLRSKESASVIERHT 542 + S E + T GR G+ +LR YVMSF+ +TLQRYA +RSKE S+IE+H+ Sbjct: 315 AMPSIGTPSEPEFNPTVNGRR-GVKPCKLRAYVMSFEPETLQRYATMRSKEGVSIIEKHS 373
Query: 543 EALFGKPEIKI 575 EALFG+PE+++ Sbjct: 374 EALFGRPEVQV 384
>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana GN=At1g48450 PE=2 SV=1 Length = 423
Score = 147 bits (370), Expect = 5e-34 Identities = 89/194 (45%), Positives = 118/194 (60%), Gaps = 5/194 (2%) Frame = +3
Query: 12 RVDTWLPQDDELESVHSFAALELIREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAA 191 RVDTW D ELE +HS E+I+ HL+++L R T D + AQISKL +G+ YAA Sbjct: 190 RVDTWPTLDGELERLHSPEVYEMIQNHLSIILKNR----TDDLTAVAQISKLGVGQVYAA 245
Query: 192 SAVYGYFIRRVDKRFQLEKTIANSTAQLIEMERTHMSERGNADHNDDVCESEKAEEVTAL 371 S +YGYF++R+D+RFQLEKT+ E E + + + N E+AEE Sbjct: 246 SVMYGYFLKRIDQRFQLEKTMRILPGGSDEGETSIEQAGRDVERNF----YEEAEETYQA 301
Query: 372 VLRSESKQVES-----STKAGRHMGMSSGRLRTYVMSFDQKTLQRYANLRSKESASVIER 536 V S ++ V S + G M RL+TYVMSFD +TLQRYA +RS+ES +IE+ Sbjct: 302 V--SSNQDVGSFVGGINASGGFSSDMKQSRLKTYVMSFDGETLQRYATIRSRESVGIIEK 359
Query: 537 HTEALFGKPEIKIT 578 HTEALFG+PEI IT Sbjct: 360 HTEALFGRPEIVIT 373
>tr|Q9AT51|Q9AT51_BRANA Putative uncharacterized protein (Fragment) OS=Brassica napus PE=2 SV=1 Length = 256
Score = 145 bits (366), Expect = 2e-33 Identities = 90/195 (46%), Positives = 116/195 (59%), Gaps = 6/195 (3%) Frame = +3
Query: 12 RVDTWLPQDDELESVHSFAALELIREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAA 191 RVDTW + ++LE +HS E+I HL L+LG R D S AQISKLR+G+ YAA Sbjct: 35 RVDTWPTKVEKLEKLHSSEMYEMIHNHLALILGPRMG----DLASVAQISKLRVGQVYAA 90
Query: 192 SAVYGYFIRRVDKRFQLEKTIANSTAQLIEMERTHMSERGNADHNDDVCESEKAEEVTAL 371 S +YGYF++RVD+RFQLEK++ T L E + + E+ E VT Sbjct: 91 SVMYGYFLKRVDQRFQLEKSMKLLTGGLDESKTS----------------VEQPENVT-- 132
Query: 372 VLRSESKQVESSTKAGRHMGMSSG------RLRTYVMSFDQKTLQRYANLRSKESASVIE 533 ++ S E + AG G RLRTYVMSFD +TLQRYA +RS+E+ +IE Sbjct: 133 -FKAVSSHPEVGSFAGGVSAKGFGSEIKPSRLRTYVMSFDSETLQRYATIRSREAVGIIE 191
Query: 534 RHTEALFGKPEIKIT 578 +HTEALFGKPEI IT Sbjct: 192 KHTEALFGKPEIVIT 206
>tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 421
Score = 145 bits (366), Expect = 2e-33 Identities = 88/196 (44%), Positives = 118/196 (60%), Gaps = 7/196 (3%) Frame = +3
Query: 12 RVDTWLPQDDELESVHSFAALELIREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAA 191 RVD+W +D +LE +HS A E+I+ HL L+LG R D S AQISKLR+G+ YAA Sbjct: 193 RVDSWSNEDGKLEQLHSNEAYEMIQNHLALILGNRAG----DLSSVAQISKLRVGQVYAA 248
Query: 192 SAVYGYFIRRVDKRFQLEKTIANSTAQLIEMERTHMSERGNADHNDDVCESEKAEEVTAL 371 S +YGYF++RVD+RFQLEK++ T+ + ++ H V ++ EV Sbjct: 249 SVMYGYFLKRVDQRFQLEKSMKVLTS----------ASDDSSIHQTIVDDARPGSEVDTS 298
Query: 372 VLRSESKQVESSTKAGRHM-------GMSSGRLRTYVMSFDQKTLQRYANLRSKESASVI 530 + S E ST G + G+ RLR YVMSFD TLQRYA +RSKE+ S+I Sbjct: 299 QVTSHP---EVSTWPGGDVSPGGFGYGIKPTRLRNYVMSFDGDTLQRYATIRSKEAVSII 355
Query: 531 ERHTEALFGKPEIKIT 578 E+HTEALFG+P + IT Sbjct: 356 EKHTEALFGRPGMVIT 371
>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 144 bits (363), Expect = 3e-33 Identities = 88/189 (46%), Positives = 112/189 (59%) Frame = +3
Query: 12 RVDTWLPQDDELESVHSFAALELIREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAA 191 RVDTW + ++LE +HS E+I HL L+LG R D S AQISKLR+G+ YAA Sbjct: 198 RVDTWPTKVEKLERLHSPEMYEMIHNHLALILGSRMG----DLNSVAQISKLRVGQVYAA 253
Query: 192 SAVYGYFIRRVDKRFQLEKTIANSTAQLIEMERTHMSERGNADHNDDVCESEKAEEVTAL 371 S +YGYF++RVD+RFQLEKT+ E + + G A + V EV A Sbjct: 254 SVMYGYFLKRVDQRFQLEKTMKILPGGSDESKTSVEQAEGTATYQAAVSSHP---EVGAF 310
Query: 372 VLRSESKQVESSTKAGRHMGMSSGRLRTYVMSFDQKTLQRYANLRSKESASVIERHTEAL 551 +K S K R LR+YVMSFD +TLQRYA +RS+E+ +IE+HTEAL Sbjct: 311 AGGVSAKGFGSEIKPSR--------LRSYVMSFDAETLQRYATIRSREAVGIIEKHTEAL 362
Query: 552 FGKPEIKIT 578 FGKPEI IT Sbjct: 363 FGKPEIVIT 371
>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800; MEB5.2 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1 Length = 421
Score = 144 bits (363), Expect = 3e-33 Identities = 88/189 (46%), Positives = 112/189 (59%) Frame = +3
Query: 12 RVDTWLPQDDELESVHSFAALELIREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAA 191 RVDTW + ++LE +HS E+I HL L+LG R D S AQISKLR+G+ YAA Sbjct: 198 RVDTWPTKVEKLERLHSPEMYEMIHNHLALILGSRMG----DLNSVAQISKLRVGQVYAA 253
Query: 192 SAVYGYFIRRVDKRFQLEKTIANSTAQLIEMERTHMSERGNADHNDDVCESEKAEEVTAL 371 S +YGYF++RVD+RFQLEKT+ E + + G A + V EV A Sbjct: 254 SVMYGYFLKRVDQRFQLEKTMKILPGGSDESKTSVEQAEGTATYQAAVSSHP---EVGAF 310
Query: 372 VLRSESKQVESSTKAGRHMGMSSGRLRTYVMSFDQKTLQRYANLRSKESASVIERHTEAL 551 +K S K R LR+YVMSFD +TLQRYA +RS+E+ +IE+HTEAL Sbjct: 311 AGGVSAKGFGSEIKPSR--------LRSYVMSFDAETLQRYATIRSREAVGIIEKHTEAL 362
Query: 552 FGKPEIKIT 578 FGKPEI IT Sbjct: 363 FGKPEIVIT 371
>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800 OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 144 bits (363), Expect = 3e-33 Identities = 88/189 (46%), Positives = 112/189 (59%) Frame = +3
Query: 12 RVDTWLPQDDELESVHSFAALELIREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAA 191 RVDTW + ++LE +HS E+I HL L+LG R D S AQISKLR+G+ YAA Sbjct: 198 RVDTWPTKVEKLERLHSPEMYEMIHNHLALILGSRMG----DLNSVAQISKLRVGQVYAA 253
Query: 192 SAVYGYFIRRVDKRFQLEKTIANSTAQLIEMERTHMSERGNADHNDDVCESEKAEEVTAL 371 S +YGYF++RVD+RFQLEKT+ E + + G A + V EV A Sbjct: 254 SVMYGYFLKRVDQRFQLEKTMKILPGGSDESKTSVEQAEGTATYQAAVSSHP---EVGAF 310
Query: 372 VLRSESKQVESSTKAGRHMGMSSGRLRTYVMSFDQKTLQRYANLRSKESASVIERHTEAL 551 +K S K R LR+YVMSFD +TLQRYA +RS+E+ +IE+HTEAL Sbjct: 311 AGGVSAKGFGSEIKPSR--------LRSYVMSFDAETLQRYATIRSREAVGIIEKHTEAL 362
Query: 552 FGKPEIKIT 578 FGKPEI IT Sbjct: 363 FGKPEIVIT 371
>tr|Q14K79|Q14K79_PLAAC Putative uncharacterized protein (Fragment) OS=Platanus acerifolia PE=2 SV=1 Length = 273
Score = 144 bits (362), Expect = 5e-33 Identities = 83/193 (43%), Positives = 118/193 (61%), Gaps = 4/193 (2%) Frame = +3
Query: 12 RVDTWLPQDDELESVHSFAALELIREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAA 191 +V TW Q+++L+ +HS A E+I+ HL L+LG R + + AQISKLR+G+ YAA Sbjct: 49 QVGTWPGQEEKLKQLHSPEAYEMIQNHLALILGNR----VANSNTVAQISKLRVGQVYAA 104
Query: 192 SAVYGYFIRRVDKRFQLEKTIA----NSTAQLIEMERTHMSERGNADHNDDVCESEKAEE 359 S +YGYF++RVD+RFQLEKT+ S + ++E++ E + E Sbjct: 105 SVMYGYFLKRVDQRFQLEKTMKILPFASDEEKSDIEQSVAEEMRPGGGKASAYAEQTHPE 164
Query: 360 VTALVLRSESKQVESSTKAGRHMGMSSGRLRTYVMSFDQKTLQRYANLRSKESASVIERH 539 V S Q + + G G+ RLRTYVM+FD +TLQ YA +RSKE+ ++IE+H Sbjct: 165 V--------SSQPGNFSPGGFGHGIKPSRLRTYVMAFDAETLQSYATIRSKEAVTIIEKH 216
Query: 540 TEALFGKPEIKIT 578 TEALFG+PEI IT Sbjct: 217 TEALFGRPEIVIT 229
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