DK947371
Clone id YMU02A01NGRL0015_K20
Library
Length 189
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_K20. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GGCTGACTCATCGTCACTAAACCTCACAGAATAAATCTGGGAAAGAAAGTTGGAATAAAT
AAATCCGGGTTTGTCAAGATTATTGAACATCTATTTGGTTGAACGGGATCCCTCGTTTCA
ACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTTCCTTTCCCTAAAAGATATTTTTCC
AAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P35194
Definition sp|P35194|UTP20_YEAST U3 small nucleolar RNA-associated protein 20 OS=Saccharomyces cerevisiae
Align length 27
Score (bit) 28.9
E-value 8.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947371|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_K20, 5'
(189 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P35194|UTP20_YEAST U3 small nucleolar RNA-associated protein ... 29 8.5

>sp|P35194|UTP20_YEAST U3 small nucleolar RNA-associated protein 20
OS=Saccharomyces cerevisiae GN=UTP20 PE=1 SV=3
Length = 2493

Score = 28.9 bits (63), Expect = 8.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2

Query: 98 VERDPSFQQLGEIYFPKGFFLSLKDIF 178
V+ P Q++ E+ FP+ F LS++D F
Sbjct: 439 VDDKPELQKVREVNFPEEFILSIRDFF 465


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947371|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_K20, 5'
(189 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******