DK947371 [AcEST]

DK947371
Clone id	YMU02A01NGRL0015_K20
Library	YMU02
Length	189
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_K20. 5' end sequence.
Accession	DK947371
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	CL1Contig3
Sequence	GGCTGACTCATCGTCACTAAACCTCACAGAATAAATCTGGGAAAGAAAGTTGGAATAAAT AAATCCGGGTTTGTCAAGATTATTGAACATCTATTTGGTTGAACGGGATCCCTCGTTTCA ACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTTCCTTTCCCTAAAAGATATTTTTCC AAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P35194
Definition	sp\|P35194\|UTP20_YEAST U3 small nucleolar RNA-associated protein 20 OS=Saccharomyces cerevisiae
Align length	27
Score (bit)	28.9
E-value	8.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK947371\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0015_K20, 5' (189 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P35194\|UTP20_YEAST U3 small nucleolar RNA-associated protein ... 29 8.5 >sp\|P35194\|UTP20_YEAST U3 small nucleolar RNA-associated protein 20 OS=Saccharomyces cerevisiae GN=UTP20 PE=1 SV=3 Length = 2493 Score = 28.9 bits (63), Expect = 8.5 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +2 Query: 98 VERDPSFQQLGEIYFPKGFFLSLKDIF 178 V+ P Q++ E+ FP+ F LS++D F Sbjct: 439 VDDKPELQKVREVNFPEEFILSIRDFF 465
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK947371\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0015_K20, 5' (189 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****