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DK947373
Clone id YMU02A01NGRL0015_K22
Library
Length 477
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_K22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
GTACCAAACTCCAGATAGAGTGATTGTACGCAGAATTCTTTATGGCCATCTCCATAGCCG
CTTCCTCGGTAGTTGTCTCTCCTAGCTGCGCCCCCCCTAAGAGCTTGTCCAAGAACTTCT
CTGGTCTCAAGGTCACTACCCTGTTCGCCCCCAAGATGCCCAACCCGCTCACCATCTCTC
ATGTCAGCCTTGTGAGCGCCATGCTTGTGTGCAACCCGTATGACTGCAAGAAGTTCGAGA
CTCTGTCCTACTTGACTCCTTTGTCCTTTGAGCATATTGCGAATCAGGTGAACTTCATGG
TCCTAAAATGCTGGACCCCTTGCATTGAGTTCGACTGAATCGGGAGCGTGCTGCTTGAAA
TTGTGTAGTGCGCCAAGGAGTATCCTGAAGCCTTCATCCACGTGCTGTGCTTTGACACTT
AGAGGCTGGTGCAGGTCTCCTGCTTCCTTGTCCATAATCCCTCTGTCTAAACTTTCT
■■Homology search results ■■ -
sp_hit_id P17673
Definition sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Trifolium repens
Align length 158
Score (bit) 75.1
E-value 1.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947373|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_K22, 5'
         (477 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...    75   1e-13
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...    74   3e-13
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...    73   7e-13
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...    72   1e-12
sp|P18960|RBS_SILPR Ribulose bisphosphate carboxylase small chai...    71   2e-12
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...    71   3e-12
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...    70   6e-12
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...    69   8e-12
sp|O22077|RBS_FAGCR Ribulose bisphosphate carboxylase small chai...    69   8e-12
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...    69   1e-11
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...    69   1e-11
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...    69   1e-11
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...    68   2e-11
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...    68   2e-11
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...    67   3e-11
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...    67   4e-11
sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small cha...    67   5e-11
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...    66   7e-11
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...    66   7e-11
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...    66   7e-11
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...    66   7e-11
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...    66   7e-11
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...    66   7e-11
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...    66   9e-11
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...    65   1e-10
sp|Q08186|RBS6_MESCR Ribulose bisphosphate carboxylase small cha...    65   2e-10
sp|Q08184|RBS4_MESCR Ribulose bisphosphate carboxylase small cha...    65   2e-10
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...    65   2e-10
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...    65   2e-10
sp|Q08183|RBS3_MESCR Ribulose bisphosphate carboxylase small cha...    65   2e-10

>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 53/158 (33%), Positives = 72/158 (45%), Gaps = 36/158 (22%)
 Frame = +3

Query: 102 SLSKNFSGLKVTTLF-APKMPNPLT--ISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFE 272
           +L+  F+GLK +  F   K  N +T   S+ S V+ M V  P   KKFETLSYL PL+ E
Sbjct: 20  NLATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDE 79

Query: 273 HIANQVNFMVLKCWTPCIEFD---------------------------------*IGSVL 353
            +  +V +++ K W PC+EF+                                     VL
Sbjct: 80  QLLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVL 139

Query: 354 LEIV*CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPSV 467
            E+  C  EYPEAFI ++ FD  R VQ   F+   P V
Sbjct: 140 KEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTPKV 177


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 54/155 (34%), Positives = 69/155 (44%), Gaps = 40/155 (25%)
 Frame = +3

Query: 117 FSGLKVTTLFAP--KMPNPL------TISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFE 272
           F+GLK T  F    KM N        T S+   V  M V  P+   KFETLSYL  L+ E
Sbjct: 16  FTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTEE 75

Query: 273 HIANQVNFMVLKCWTPCIEFD*IGS--------------------------------VLL 356
            +  +V +++   W PC+EFD  GS                                V+ 
Sbjct: 76  QLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVIN 135

Query: 357 EIV*CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNP 461
           E+  CAK YP+AFI V+ FD  R VQ   F+VH P
Sbjct: 136 EVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170


>sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Medicago sativa PE=2 SV=1
          Length = 180

 Score = 72.8 bits (177), Expect = 7e-13
 Identities = 50/152 (32%), Positives = 69/152 (45%), Gaps = 37/152 (24%)
 Frame = +3

Query: 117 FSGLKVTTLF--APKMPNPLT--ISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIAN 284
           F+GLK +  F    K  N +T   S+   V+ M V  P   KKFETLSYL PL+ E +A 
Sbjct: 26  FTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAK 85

Query: 285 QVNFMVLKCWTPCIEFD---------------------------------*IGSVLLEIV 365
           +V +++ K W PC+EF+                                     VL E+ 
Sbjct: 86  EVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELA 145

Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNP 461
            C  EYP++FI ++ FD  R VQ   F+ H P
Sbjct: 146 DCKAEYPDSFIRIIGFDNVRQVQCISFIAHTP 177


>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1
          Length = 189

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 47/129 (36%), Positives = 59/129 (45%), Gaps = 32/129 (24%)
 Frame = +3

Query: 171 TISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQVNFMVLKCWTPCIEFD*IG-- 344
           T S+ S V  M V  PY  KKFETLSYL  L+ E +  +V +++   W PC+EF+  G  
Sbjct: 58  TTSNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEI 117

Query: 345 ------------------------------SVLLEIV*CAKEYPEAFIHVLCFDT*RLVQ 434
                                          VL E+  CAK YP AFI V+ FD  R VQ
Sbjct: 118 KRVYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQ 177

Query: 435 VSCFLVHNP 461
              F+VH P
Sbjct: 178 CISFIVHKP 186


>sp|P18960|RBS_SILPR Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Silene pratensis GN=RBCS PE=2 SV=1
          Length = 177

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 38/153 (24%)
 Frame = +3

Query: 117 FSGLKVTTLFAPKMPNPLTISHVSL----VSAMLVCNPYDCKKFETLSYLTPLSFEHIAN 284
           FSGLK T+ F     + + I+ ++     V+ M V  P + KKFETLSYL  LS E +  
Sbjct: 25  FSGLKSTSAFPVSRKSNVDITSLATNGGRVNCMQVWPPRNLKKFETLSYLPTLSEESLLK 84

Query: 285 QVNFMVLKCWTPCIEFD*IG----------------------------------SVLLEI 362
           ++N++++K W PC+EF+ +G                                   V  E+
Sbjct: 85  EINYLLIKGWVPCLEFE-VGPAHVYRENNKSPGYYDGRYWTMWKLPMFGCTDASQVAAEV 143

Query: 363 V*CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNP 461
           V C   YP+A + ++ FD  R VQ   F+ + P
Sbjct: 144 VECKNAYPDAHVRIIGFDNKRQVQCISFIAYKP 176


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 51/149 (34%), Positives = 68/149 (45%), Gaps = 33/149 (22%)
 Frame = +3

Query: 120 SGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQVNFM 299
           +GLK             T ++ S VS M V  PY+  KFETLSYL PLS + +A Q++++
Sbjct: 32  AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91

Query: 300 VLKCWTPCIEFD*IG--------------------------------SVLLEIV*CAKEY 383
           +   W PCIEFD  G                                SVL EI  C K Y
Sbjct: 92  IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLY 151

Query: 384 -PEAFIHVLCFDT*RLVQVSCFLVHNPSV 467
             + +I  L FD  R VQ + F+VH P++
Sbjct: 152 GKKCYIRCLGFDNTRQVQCASFIVHQPTL 180


>sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Cucumis sativus GN=RBCS PE=2 SV=1
          Length = 189

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 52/163 (31%), Positives = 72/163 (44%), Gaps = 38/163 (23%)
 Frame = +3

Query: 102 SLSKNFSGLKVTTLFAPKMPNPLTI----SHVSLVSAMLVCNPYDCKKFETLSYLTPLSF 269
           S+   F+GLK +  F     N + I    S+   V  M V  P   +KFETLSYL  +S 
Sbjct: 23  SMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCMKVWPPLGLRKFETLSYLPDMSN 82

Query: 270 EHIANQVNFMVLKCWTPCIEFD*IGS---------------------------------- 347
           E ++ + ++++   W PC+EFD IGS                                  
Sbjct: 83  EQLSKECDYLLRNGWVPCVEFD-IGSGFVYRENHRSPGFYDGRYWTMWKLPMFGCTDSSQ 141

Query: 348 VLLEIV*CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPSV*TF 476
           V+ EI    KEYP+AFI V+ FD  R VQ   F+ + P V  F
Sbjct: 142 VIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPQVLLF 184


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score = 69.3 bits (168), Expect = 8e-12
 Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 36/152 (23%)
 Frame = +3

Query: 117 FSGLKVTTLF-APKMPNPLT--ISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQ 287
           F+GLK ++ F   +  N +T   S+   V  M V  P   KKFETLSYL PLS E +A +
Sbjct: 30  FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 288 VNFMVLKCWTPCIEFD---------------------------------*IGSVLLEIV* 368
           V++++ K W PC+EF+                                     VL E+  
Sbjct: 90  VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEE 149

Query: 369 CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464
             K YP++FI ++ FD  R VQ   F+ + P+
Sbjct: 150 AKKAYPQSFIRIIGFDNVRQVQCISFIAYKPA 181


>sp|O22077|RBS_FAGCR Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1
          Length = 182

 Score = 69.3 bits (168), Expect = 8e-12
 Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 37/152 (24%)
 Frame = +3

Query: 117 FSGLKVTTLFAP--KMPNPLT--ISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIAN 284
           F+GLK T  F    K  N +T   S+   V  M V  P   +KFETLSYL PLS E +A 
Sbjct: 28  FTGLKSTAAFPATRKSNNDITSLASNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAK 87

Query: 285 QVNFMVLKCWTPCIEFD---------------------------------*IGSVLLEIV 365
           Q+ +++LK W PC+EF+                                     VL E+ 
Sbjct: 88  QIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQ 147

Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNP 461
             +K YP + I ++ FD  R VQ   F+ + P
Sbjct: 148 EASKTYPTSHIRIIGFDNKRQVQCISFIAYKP 179


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 37/157 (23%)
 Frame = +3

Query: 102 SLSKNFSGLKVTTLF--APKMPNPLTI--SHVSLVSAMLVCNPYDCKKFETLSYLTPLSF 269
           SL+  F+GLK    F    K  N  +   S+   V  M V  P   KK+ETLSYL PLS 
Sbjct: 21  SLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80

Query: 270 EHIANQVNFMVLKCWTPCIEFD---------------------------------*IGSV 350
           E ++ ++++++   W PC+EF+                                     V
Sbjct: 81  EALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140

Query: 351 LLEIV*CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNP 461
           + E+  C KEYP AFI V+ FD  R VQ   F+V  P
Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 154
Score (bit) 140.0
E-value 3.0e-32
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947373|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_K22, 5'
         (477 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   140   3e-32
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...    86   7e-16
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...    83   6e-15
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...    82   1e-14
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...    82   1e-14
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...    82   2e-14
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...    81   2e-14
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...    81   3e-14
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...    81   3e-14
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...    81   3e-14
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...    80   4e-14
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...    80   7e-14
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...    79   1e-13
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...    79   1e-13
tr|A9U377|A9U377_PHYPA Ribulose bisphosphate carboxylase small c...    79   1e-13
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...    78   2e-13
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...    78   3e-13
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c...    77   4e-13
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...    76   1e-12
tr|A9NXP2|A9NXP2_PICSI Ribulose bisphosphate carboxylase small c...    75   2e-12
tr|A9NM29|A9NM29_PICSI Ribulose bisphosphate carboxylase small c...    75   2e-12
tr|A9NLD6|A9NLD6_PICSI Ribulose bisphosphate carboxylase small c...    75   2e-12
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...    74   3e-12
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...    74   3e-12
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c...    74   3e-12
tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c...    74   3e-12
tr|A9NKU8|A9NKU8_PICSI Ribulose bisphosphate carboxylase small c...    74   3e-12
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...    74   5e-12
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...    74   5e-12
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...    74   5e-12

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  140 bits (353), Expect = 3e-32
 Identities = 84/154 (54%), Positives = 92/154 (59%), Gaps = 32/154 (20%)
 Frame = +3

Query: 99  KSLSKNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHI 278
           +SLSK+FSGLK  TLFAPK  NPL IS+ S +SAMLV  PYD KKFETLSYL PL+ + I
Sbjct: 20  ESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQI 79

Query: 279 ANQVNFMVLKCWTPCIEFD*I--------------------------------GSVLLEI 362
           A QV +MV K WTPCIEFD I                                GSVL EI
Sbjct: 80  AKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREI 139

Query: 363 V*CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464
             CAKEYP AFI VL FD  R VQV+ FLV  PS
Sbjct: 140 AECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score = 86.3 bits (212), Expect = 7e-16
 Identities = 57/153 (37%), Positives = 74/153 (48%), Gaps = 35/153 (22%)
 Frame = +3

Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290
           K FSGLK TTLFA K     ++ + S V  M V NP    KFET SYL PL+ + IA QV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 291 NFMVLKCWTPCIEFD*IGS-----------------------------------VLLEIV 365
           +FM+ +   PCIEFD +GS                                   VL EI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464
            C + +P  ++ VL FD+ + VQ+  FLV  P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score = 83.2 bits (204), Expect = 6e-15
 Identities = 56/153 (36%), Positives = 73/153 (47%), Gaps = 35/153 (22%)
 Frame = +3

Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290
           K FSGLK TTL A K     ++ + S V  M V NP    KFET SYL PL+ + IA QV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 291 NFMVLKCWTPCIEFD*IGS-----------------------------------VLLEIV 365
           +FM+ +   PCIEFD +GS                                   VL EI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464
            C + +P  ++ VL FD+ + VQ+  FLV  P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 35/153 (22%)
 Frame = +3

Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290
           K FSGLK  TLF+ K     ++ + S V  M V NP    KFET SYL PL+ + IA QV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 291 NFMVLKCWTPCIEFD*IGS-----------------------------------VLLEIV 365
           ++M+ +   PCIEFD +GS                                   VL EI 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464
            C  ++P  ++ VL FD+ + VQ+  FLV  P+
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 55/153 (35%), Positives = 71/153 (46%), Gaps = 35/153 (22%)
 Frame = +3

Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290
           K FSGLK  TLF  K     ++ + S V  M V NP    KFET SYL PLS + IA QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 291 NFMVLKCWTPCIEFD*IGS-----------------------------------VLLEIV 365
           ++M+ +   PCIEFD +G+                                   VL EI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464
            C   YP  ++ VL FD+ + VQ+  FLV  P+
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 54/153 (35%), Positives = 72/153 (47%), Gaps = 35/153 (22%)
 Frame = +3

Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290
           K FSGLK  TLF+ K      + + S V  M V NP    KFET SYL PL+ + IA QV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 291 NFMVLKCWTPCIEFD*IGS-----------------------------------VLLEIV 365
           ++M+ +   PCIEFD +GS                                   VL EI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464
            C  ++P  ++ VL FD+ + VQ+  FLV  P+
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 54/150 (36%), Positives = 69/150 (46%), Gaps = 32/150 (21%)
 Frame = +3

Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290
           K FSGLK  T+F+ K  N  ++ + S V  M V NP    KFET SYL PLS + IA QV
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 291 NFMVLKCWTPCIEFD*I--------------------------------GSVLLEIV*CA 374
            +M+ +   PC+EFD                                    VL EI  C 
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 375 KEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464
           K +P  F+ VL FD  + VQ+  FLV  P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 35/153 (22%)
 Frame = +3

Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290
           K FSGLK  TLF+ +     ++ + S V  M V NP    KFET SYL PL+ + IA QV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 291 NFMVLKCWTPCIEFD*IGS-----------------------------------VLLEIV 365
           ++M+ +   PCIEFD +GS                                   VL EI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 366 *CAKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464
            C  ++P  ++ VL FD+ + VQ+  FLV  P+
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 54/150 (36%), Positives = 71/150 (47%), Gaps = 32/150 (21%)
 Frame = +3

Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290
           K FSGLK +TLF+ K  +  ++ + S V  M V NP    KFET SYL PLS + IA QV
Sbjct: 32  KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 291 NFMVLKCWTPCIEFD*I--------------------------------GSVLLEIV*CA 374
           ++M+ +   PC+EFD                                    VL EI  C 
Sbjct: 92  DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151

Query: 375 KEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464
           K +P  F+ VL FD  + VQ+  FLV  P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_233894 PE=3 SV=1
          Length = 182

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 55/151 (36%), Positives = 69/151 (45%), Gaps = 33/151 (21%)
 Frame = +3

Query: 111 KNFSGLKVTTLFAPKMPNPLTISHVSLVSAMLVCNPYDCKKFETLSYLTPLSFEHIANQV 290
           K FSGLK TTLF+ K     ++ + S V  M V NP    KFET SYL PLS + IA QV
Sbjct: 32  KAFSGLKSTTLFSSKAQTLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 291 NFMVLKCWTPCIEFD---------------------------------*IGSVLLEIV*C 371
            +M+ +   PC+EFD                                     VL EI  C
Sbjct: 92  EYMIQQKLIPCLEFDVNANGVSRANNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEEC 151

Query: 372 AKEYPEAFIHVLCFDT*RLVQVSCFLVHNPS 464
            K +P  F+ VL FD  + VQ+  FLV  P+
Sbjct: 152 KKTFPGCFVRVLGFDNVKQVQICGFLVARPN 182