DK947377
Clone id YMU02A01NGRL0015_L05
Library
Length 359
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_L05. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCCAAACAAAGCCGGTCTTCCACAAGAAGGCTAAGACTACAAAGAAAATTGTGTTAAGGT
TGCAATGTCAGAGTTGCAAGCATGTAACTCAGCATCCAATCAAGCGATGCAAGCACTTTG
AGATTGGTGGTGACAAGAAGCGCAAGGGTGCCATGTACTAGGTCAATTTTTGCAGCATCA
TGATGAATCGAAGAGTTTTGCTCAGACCTTTGCACTGTTTTAAGTATTAAATTGAACTGA
ATTTTGTGACAAACATGACCTGGATGTCCCTTTGCTCTGAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q96499
Definition sp|Q96499|RL44_GOSHI 60S ribosomal protein L44 OS=Gossypium hirsutum
Align length 49
Score (bit) 102.0
E-value 6.0e-22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947377|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_L05, 5'
(279 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q96499|RL44_GOSHI 60S ribosomal protein L44 OS=Gossypium hirs... 102 6e-22
sp|O23290|RL36A_ARATH 60S ribosomal protein L36a OS=Arabidopsis ... 99 7e-21
sp|Q9NB33|RL44_AEDTR 60S ribosomal protein L44 OS=Aedes triseria... 87 2e-17
sp|O59870|RL44_PHARH 60S ribosomal protein L44 OS=Phaffia rhodoz... 86 4e-17
sp|Q4PNY0|RL44_CANGY 60S ribosomal protein L44 OS=Candida glycer... 86 8e-17
sp|Q9UTI8|RL44_SCHPO 60S ribosomal protein L44 OS=Schizosaccharo... 84 2e-16
sp|Q9UWE4|RL44_COPCI 60S ribosomal protein L44 OS=Coprinopsis ci... 84 2e-16
sp|A8PCG3|RL44_COPC7 60S ribosomal protein L44 OS=Coprinopsis ci... 84 2e-16
sp|P49213|RL44_CHLRE 60S ribosomal protein L44 OS=Chlamydomonas ... 84 2e-16
sp|P48166|RL44_CAEEL 60S ribosomal protein L44 OS=Caenorhabditis... 84 3e-16
sp|P52809|RL44_PICJA 60S ribosomal protein L44 OS=Pichia jadinii... 83 4e-16
sp|P31866|RL44_PICGU 60S ribosomal protein L44 OS=Pichia guillie... 83 4e-16
sp|P27076|RL44_KLUMA 60S ribosomal protein L44 OS=Kluyveromyces ... 83 4e-16
sp|P31027|RL44_KLULA 60S ribosomal protein L44 OS=Kluyveromyces ... 83 4e-16
sp|Q6BLK0|RL44_DEBHA 60S ribosomal protein L44 OS=Debaryomyces h... 83 4e-16
sp|Q9HF88|RL44_CRYNE 60S ribosomal protein L44 OS=Cryptococcus n... 83 4e-16
sp|P90702|RL44_BRUMA 60S ribosomal protein L44 OS=Brugia malayi ... 83 4e-16
sp|Q00477|RL44P_CANMA 60S ribosomal protein L44 P OS=Candida mal... 83 4e-16
sp|P02405|RL44_YEAST 60S ribosomal protein L42 OS=Saccharomyces ... 82 8e-16
sp|Q9UVB8|RL44_PICCI 60S ribosomal protein L44 OS=Pichia ciferri... 82 8e-16
sp|Q754N8|RL44_ASHGO 60S ribosomal protein L44 OS=Ashbya gossypi... 80 2e-15
sp|Q6CFS7|RL44_YARLI 60S ribosomal protein L44 OS=Yarrowia lipol... 80 4e-15
sp|P31028|RL44_DEBOC 60S ribosomal protein L44 OS=Debaryomyces o... 79 9e-15
sp|P27075|RL44_CANTR 60S ribosomal protein L44 OS=Candida tropic... 79 9e-15
sp|P27074|RL44Q_CANMA 60S ribosomal protein L44 Q OS=Candida mal... 79 9e-15
sp|Q5R9D2|RL36L_PONAB 60S ribosomal protein L36a-like OS=Pongo a... 76 6e-14
sp|Q969Q0|RL36L_HUMAN 60S ribosomal protein L36a-like OS=Homo sa... 76 6e-14
sp|P83883|RL36A_RAT 60S ribosomal protein L36a OS=Rattus norvegi... 76 6e-14
sp|P83884|RL36A_PIG 60S ribosomal protein L36a OS=Sus scrofa GN=... 76 6e-14
sp|P83882|RL36A_MOUSE 60S ribosomal protein L36a OS=Mus musculus... 76 6e-14

>sp|Q96499|RL44_GOSHI 60S ribosomal protein L44 OS=Gossypium
hirsutum GN=RPL44 PE=3 SV=3
Length = 105

Score = 102 bits (254), Expect = 6e-22
Identities = 46/49 (93%), Positives = 47/49 (95%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 149
QTKPVFHKKAKTTKKIVLRLQCQ CKHV+QHPIKRCKHFEIGGDKK KG
Sbjct: 53 QTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 101


>sp|O23290|RL36A_ARATH 60S ribosomal protein L36a OS=Arabidopsis
thaliana GN=RPL36AA PE=2 SV=3
Length = 105

Score = 99.0 bits (245), Expect = 7e-21
Identities = 45/49 (91%), Positives = 46/49 (93%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 149
QTKPVFHKKAKTTKKIVLRLQCQSCKH +Q PIKRCKHFEIGGDKK KG
Sbjct: 53 QTKPVFHKKAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKG 101


>sp|Q9NB33|RL44_AEDTR 60S ribosomal protein L44 OS=Aedes triseriatus
GN=RpL44 PE=3 SV=3
Length = 104

Score = 87.4 bits (215), Expect = 2e-17
Identities = 38/51 (74%), Positives = 44/51 (86%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKGAM 155
QTKP+F KKAKTTKKIVLR++C CK+ Q P+KRCKHFE+GGDKKRKG M
Sbjct: 51 QTKPIFRKKAKTTKKIVLRMECVDCKYRKQTPLKRCKHFELGGDKKRKGQM 101


>sp|O59870|RL44_PHARH 60S ribosomal protein L44 OS=Phaffia rhodozyma
GN=RPL44 PE=3 SV=3
Length = 106

Score = 86.3 bits (212), Expect = 4e-17
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKGA 152
QTKPVFHKKAKTTKK+VLRL+C CK+ Q +KRCKHFE+GGDKK KGA
Sbjct: 53 QTKPVFHKKAKTTKKVVLRLECSVCKYKMQMTLKRCKHFELGGDKKTKGA 102


>sp|Q4PNY0|RL44_CANGY 60S ribosomal protein L44 OS=Candida
glycerinogenes GN=RPL44 PE=3 SV=3
Length = 106

Score = 85.5 bits (210), Expect = 8e-17
Identities = 38/50 (76%), Positives = 44/50 (88%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKGA 152
QTKPVFHKKAKTTKK+VLRL+C +CK Q +KRCKHFE+GGDKK+KGA
Sbjct: 53 QTKPVFHKKAKTTKKVVLRLECVACKTKLQLSLKRCKHFELGGDKKQKGA 102


>sp|Q9UTI8|RL44_SCHPO 60S ribosomal protein L44
OS=Schizosaccharomyces pombe GN=rpl44 PE=2 SV=3
Length = 106

Score = 84.0 bits (206), Expect = 2e-16
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKGA 152
QTKPVFHKKAK TKK+VLRL+C SCK+ Q +KRCKHFE+GG+KK KGA
Sbjct: 53 QTKPVFHKKAKVTKKVVLRLECVSCKYKNQLVLKRCKHFELGGEKKTKGA 102


>sp|Q9UWE4|RL44_COPCI 60S ribosomal protein L44 OS=Coprinopsis
cinerea GN=RPL44 PE=3 SV=3
Length = 106

Score = 84.0 bits (206), Expect = 2e-16
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKGA 152
QTKPVFHKKAKTTKK+VLRL+C CK+ Q +KRCKHFE+GG+KK KGA
Sbjct: 53 QTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKGA 102


>sp|A8PCG3|RL44_COPC7 60S ribosomal protein L44 OS=Coprinopsis
cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPL44
PE=3 SV=2
Length = 106

Score = 84.0 bits (206), Expect = 2e-16
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKGA 152
QTKPVFHKKAKTTKK+VLRL+C CK+ Q +KRCKHFE+GG+KK KGA
Sbjct: 53 QTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKGA 102


>sp|P49213|RL44_CHLRE 60S ribosomal protein L44 OS=Chlamydomonas
reinhardtii GN=RPL44 PE=3 SV=2
Length = 99

Score = 84.0 bits (206), Expect = 2e-16
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKR 143
QTKPVFHKKAKTTKKIVLR+QCQ CK +KRCKHFEIGGDKK+
Sbjct: 51 QTKPVFHKKAKTTKKIVLRMQCQECKQTCMKGLKRCKHFEIGGDKKK 97


>sp|P48166|RL44_CAEEL 60S ribosomal protein L44 OS=Caenorhabditis
elegans GN=rpl-41 PE=2 SV=2
Length = 105

Score = 83.6 bits (205), Expect = 3e-16
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 149
QTKP+F KKAKTTKKIVLR++C CKH Q PIKRCKHFE+GG KK +G
Sbjct: 52 QTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRG 100


tr_hit_id A9ST20
Definition tr|A9ST20|A9ST20_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 49
Score (bit) 104.0
E-value 3.0e-21
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947377|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_L05, 5'
(279 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9ST20|A9ST20_PHYPA Predicted protein OS=Physcomitrella paten... 104 3e-21
tr|A9RQN3|A9RQN3_PHYPA Predicted protein OS=Physcomitrella paten... 104 3e-21
tr|A9RFG1|A9RFG1_PHYPA Predicted protein (Fragment) OS=Physcomit... 104 3e-21
tr|A9RD45|A9RD45_PHYPA Predicted protein OS=Physcomitrella paten... 104 3e-21
tr|A9PD13|A9PD13_POPTR Putative uncharacterized protein OS=Popul... 103 3e-21
tr|A7Q2A2|A7Q2A2_VITVI Chromosome chr13 scaffold_45, whole genom... 102 1e-20
tr|A7P2V6|A7P2V6_VITVI Chromosome chr1 scaffold_5, whole genome ... 102 1e-20
tr|A7P2V5|A7P2V5_VITVI Chromosome chr1 scaffold_5, whole genome ... 102 1e-20
tr|Q00508|Q00508_CANMA Ribosomal protein L41 OS=Candida maltosa ... 102 1e-20
tr|Q8H5N0|Q8H5N0_ORYSJ Os07g0450000 protein OS=Oryza sativa subs... 100 3e-20
tr|Q0D5Z3|Q0D5Z3_ORYSJ Os07g0523100 protein OS=Oryza sativa subs... 100 3e-20
tr|Q0D5Z2|Q0D5Z2_ORYSJ Os07g0523300 protein (Fragment) OS=Oryza ... 100 3e-20
tr|B8LKF1|B8LKF1_PICSI Putative uncharacterized protein OS=Picea... 100 3e-20
tr|B6TXV2|B6TXV2_MAIZE 60S ribosomal protein L44 OS=Zea mays PE=... 100 3e-20
tr|B3TLV9|B3TLV9_ELAGV 60S ribosomal protein L44 OS=Elaeis guine... 100 3e-20
tr|B3TLU1|B3TLU1_ELAGV 60S ribosomal protein L44 OS=Elaeis guine... 100 3e-20
tr|B3TLU0|B3TLU0_ELAGV 60S ribosomal protein L44 OS=Elaeis guine... 100 3e-20
tr|A6N0K7|A6N0K7_ORYSI Putative uncharacterized protein OS=Oryza... 100 3e-20
tr|A9P9G6|A9P9G6_POPTR Putative uncharacterized protein OS=Popul... 100 6e-20
tr|B7FGY8|B7FGY8_MEDTR Putative uncharacterized protein OS=Medic... 99 8e-20
tr|Q94ER6|Q94ER6_BRARP 60S ribosomal protein L144 (Fragment) OS=... 98 2e-19
tr|Q6RI22|Q6RI22_9ASPA 60S ribosomal protein L44 OS=Phalaenopsis... 98 2e-19
tr|B8LRK8|B8LRK8_PICSI Putative uncharacterized protein OS=Picea... 98 2e-19
tr|B6SIY6|B6SIY6_MAIZE 60S ribosomal protein L44 OS=Zea mays PE=... 98 2e-19
tr|B6SHJ5|B6SHJ5_MAIZE 60S ribosomal protein L44 OS=Zea mays PE=... 98 2e-19
tr|A9NQ93|A9NQ93_PICSI Putative uncharacterized protein OS=Picea... 98 2e-19
tr|Q2V9C3|Q2V9C3_SOLTU Ribosomal protein L41-like OS=Solanum tub... 93 6e-18
tr|B0Z9N5|B0Z9N5_9BILA Ribosomal protein rpl36a OS=Lineus viridi... 92 2e-17
tr|A9UPR3|A9UPR3_MONBE Predicted protein OS=Monosiga brevicollis... 91 2e-17
tr|A7SD22|A7SD22_NEMVE Predicted protein OS=Nematostella vectens... 91 2e-17

>tr|A9ST20|A9ST20_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_106959 PE=3 SV=1
Length = 105

Score = 104 bits (259), Expect = 3e-21
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 149
QTKPVFHKKAKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG
Sbjct: 53 QTKPVFHKKAKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101


>tr|A9RQN3|A9RQN3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_177351 PE=3 SV=1
Length = 105

Score = 104 bits (259), Expect = 3e-21
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 149
QTKPVFHKKAKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG
Sbjct: 53 QTKPVFHKKAKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101


>tr|A9RFG1|A9RFG1_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_129054 PE=3 SV=1
Length = 105

Score = 104 bits (259), Expect = 3e-21
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 149
QTKPVFHKKAKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG
Sbjct: 53 QTKPVFHKKAKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101


>tr|A9RD45|A9RD45_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_109414 PE=3 SV=1
Length = 105

Score = 104 bits (259), Expect = 3e-21
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 149
QTKPVFHKKAKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG
Sbjct: 53 QTKPVFHKKAKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101


>tr|A9PD13|A9PD13_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=3 SV=1
Length = 105

Score = 103 bits (258), Expect = 3e-21
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 149
QTKPVFHKKAKTTKKIVLRLQCQSCKHV+QHPIKRCKHFEIGGDKK KG
Sbjct: 53 QTKPVFHKKAKTTKKIVLRLQCQSCKHVSQHPIKRCKHFEIGGDKKGKG 101


>tr|A7Q2A2|A7Q2A2_VITVI Chromosome chr13 scaffold_45, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00028799001
PE=3 SV=1
Length = 115

Score = 102 bits (254), Expect = 1e-20
Identities = 46/49 (93%), Positives = 47/49 (95%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 149
QTKPVFHKKAKTTKKIVLRLQCQ CKHV+QHPIKRCKHFEIGGDKK KG
Sbjct: 63 QTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 111


>tr|A7P2V6|A7P2V6_VITVI Chromosome chr1 scaffold_5, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00030200001
PE=3 SV=1
Length = 109

Score = 102 bits (254), Expect = 1e-20
Identities = 46/49 (93%), Positives = 47/49 (95%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 149
QTKPVFHKKAKTTKKIVLRLQCQ CKHV+QHPIKRCKHFEIGGDKK KG
Sbjct: 57 QTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 105


>tr|A7P2V5|A7P2V5_VITVI Chromosome chr1 scaffold_5, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00030198001
PE=3 SV=1
Length = 151

Score = 102 bits (254), Expect = 1e-20
Identities = 46/49 (93%), Positives = 47/49 (95%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 149
QTKPVFHKKAKTTKKIVLRLQCQ CKHV+QHPIKRCKHFEIGGDKK KG
Sbjct: 99 QTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147


>tr|Q00508|Q00508_CANMA Ribosomal protein L41 OS=Candida maltosa
PE=3 SV=1
Length = 105

Score = 102 bits (254), Expect = 1e-20
Identities = 46/49 (93%), Positives = 47/49 (95%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 149
QTKPVFHKKAKTTKKIVLRLQCQ CKHV+QHPIKRCKHFEIGGDKK KG
Sbjct: 53 QTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 101


>tr|Q8H5N0|Q8H5N0_ORYSJ Os07g0450000 protein OS=Oryza sativa subsp.
japonica GN=OJ1047_A06.130 PE=3 SV=1
Length = 105

Score = 100 bits (250), Expect = 3e-20
Identities = 45/49 (91%), Positives = 47/49 (95%)
Frame = +3

Query: 3 QTKPVFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 149
QTKPVFHKKAKTTKKIVL+LQCQSCKH +QHPIKRCKHFEIGGDKK KG
Sbjct: 53 QTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101