DK947385
Clone id YMU02A01NGRL0015_L15
Library
Length 248
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_L15. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GTACGCTTTCTGGAGCATCGGTGGAGATACAAACGGCCTCCTCTTCAAGCAAGCTTTCAA
GACCTTGTAAGTTGAAGGGCTTTCAACAACTTGGGCAGAGGGGCACCATTATGATCGGCA
CCCCATTCATATCTTTCCCTTACACGTGATCCATGAATTTGCACTAGTGTATACCAAGGC
AATTTTGTCAATTCTCTTATATTGGCATTGTATCAAAGGACACGAACAAATTTTTTGTTT
TACTCTAC
■■Homology search results ■■ -
sp_hit_id Q646B6
Definition sp|Q646B6|T2R13_PANTR Taste receptor type 2 member 13 OS=Pan troglodytes
Align length 36
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947385|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_L15, 5'
(248 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q646B6|T2R13_PANTR Taste receptor type 2 member 13 OS=Pan tro... 30 2.9
sp|Q646D8|T2R13_PANPA Taste receptor type 2 member 13 OS=Pan pan... 30 4.9
sp|Q646F7|T2R13_PAPHA Taste receptor type 2 member 13 OS=Papio h... 29 6.4
sp|Q645V1|T2R13_PONPY Taste receptor type 2 member 13 OS=Pongo p... 29 8.3

>sp|Q646B6|T2R13_PANTR Taste receptor type 2 member 13 OS=Pan
troglodytes GN=TAS2R13 PE=3 SV=1
Length = 303

Score = 30.4 bits (67), Expect = 2.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2

Query: 98 EGHHYDRHPIHIFPLHVIHEFALVYTKAILSILLYW 205
+GH R +H L ++ F L+Y LSIL+ W
Sbjct: 217 KGHRDPRTKVHTNALKIVISFLLLYASFFLSILISW 252


>sp|Q646D8|T2R13_PANPA Taste receptor type 2 member 13 OS=Pan
paniscus GN=TAS2R13 PE=3 SV=1
Length = 303

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2

Query: 98 EGHHYDRHPIHIFPLHVIHEFALVYTKAILSILLYW 205
+GH R +H L ++ F L Y LSIL+ W
Sbjct: 217 KGHRDPRTKVHTNALKIVISFLLFYASFFLSILISW 252


>sp|Q646F7|T2R13_PAPHA Taste receptor type 2 member 13 OS=Papio
hamadryas GN=TAS2R13 PE=3 SV=1
Length = 303

Score = 29.3 bits (64), Expect = 6.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2

Query: 98 EGHHYDRHPIHIFPLHVIHEFALVYTKAILSILLYW 205
+GH R HI L ++ F L+Y L IL+ W
Sbjct: 217 KGHREPRTKAHINALKIVISFLLLYASFFLCILISW 252


>sp|Q645V1|T2R13_PONPY Taste receptor type 2 member 13 OS=Pongo
pygmaeus GN=TAS2R13 PE=3 SV=1
Length = 303

Score = 28.9 bits (63), Expect = 8.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2

Query: 98 EGHHYDRHPIHIFPLHVIHEFALVYTKAILSILLYW 205
+GH R +H L ++ F L+Y L IL+ W
Sbjct: 217 KGHREPRTKVHTNALKIVISFLLLYASFFLCILISW 252


tr_hit_id A4XRK7
Definition tr|A4XRK7|A4XRK7_PSEMY Acriflavin resistance protein OS=Pseudomonas mendocina (strain ymp)
Align length 42
Score (bit) 33.1
E-value 7.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947385|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_L15, 5'
(248 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4XRK7|A4XRK7_PSEMY Acriflavin resistance protein OS=Pseudomo... 33 7.2

>tr|A4XRK7|A4XRK7_PSEMY Acriflavin resistance protein OS=Pseudomonas
mendocina (strain ymp) GN=Pmen_1208 PE=3 SV=1
Length = 1017

Score = 33.1 bits (74), Expect = 7.2
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +3

Query: 9 SGASVEIQTASSSSKLSRPCKLKGFQQLGQRGTIMIGTPFIS 134
SGA V + T S S +RP KLK FQQL I+ G P +S
Sbjct: 769 SGAMVPLGTLISLSDRARPTKLKQFQQL--NSAIIEGVPIVS 808