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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947421
Clone id YMU02A01NGRL0015_N15
Library
Length 739
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_N15. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GCACGGGAGCCACTGCTGCCATGTGCATTGGCTTCATTTTTCCTGGGATTCTGTGTTTAA
GGGACATTTATGAGATTTCTACCAAGAAAGAGAGATTGGTTTCATGGGTCATGGTAGTGC
TTGCTGTGACAACGGGTGCCATTGCGATAACAAGCGATGTTCTTAATCTTCTTGTGAGCG
AATCGTCAACACCATCAGGGCCTGTTGGTGCTTTGTAGAGTAAGGAGAAAGGGTGGTGCA
GTACACATTGTATGGGGGCTCAGTGTACAAAATAGATCTCATTGCTAGAAAGCGCTTTTG
ATGGGCACCCGAGGGACACTCTGCTGCCTTGAAGCTGTTTTTCGTGGTCTGCTGACAGCA
CCTGGGGACGACTGTGCATATCTGACCACTTTATGGACTGGACATGCTGATTGGCCTAAT
AGACAGAGAAATGCATTCCTGTCAGTTGCCTTTATTTATGATGGTTTTGGTTACCAGCGT
TCTTGCTCATTCTGGAGCTTGCATTATGCCATTGATTTGTTTAAATGAAACAAAGGTTAC
ATCAATACTAAGCCTATGCTATTTCCTTTGATGTATCAGATGGCATTATGAAATAGAGAC
ATTCATTTTTCCCTGAATAAAAAAAATTGGACGGGAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGAAA
AAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q28HE5
Definition sp|Q28HE5|S38A6_XENTR Probable sodium-coupled neutral amino acid transporter 6 OS=Xenopus tropicalis
Align length 55
Score (bit) 34.3
E-value 0.55
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947421|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_N15, 5'
         (635 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q28HE5|S38A6_XENTR Probable sodium-coupled neutral amino acid...    34   0.55 
sp|P0C7U5|C5AR_DANRE C5a anaphylatoxin chemotactic receptor OS=D...    30   8.0  

>sp|Q28HE5|S38A6_XENTR Probable sodium-coupled neutral amino acid
           transporter 6 OS=Xenopus tropicalis GN=slc38a6 PE=2 SV=1
          Length = 448

 Score = 34.3 bits (77), Expect = 0.55
 Identities = 15/55 (27%), Positives = 33/55 (60%)
 Frame = +3

Query: 6   GATAAMCIGFIFPGILCLRDIYEISTKKERLVSWVMVVLAVTTGAIAITSDVLNL 170
           G+T + C+ F+FPG+  ++   E  +  ++  +  ++VL +  GA ++T  ++NL
Sbjct: 393 GSTTSTCLLFVFPGLFYVKLGREDCSSPQKFGACGLLVLGICIGACSLTLIIMNL 447


>sp|P0C7U5|C5AR_DANRE C5a anaphylatoxin chemotactic receptor
           OS=Danio rerio GN=c5ar1 PE=3 SV=1
          Length = 346

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
 Frame = +2

Query: 386 PLYGLDMLIGLIDREMHSCQLPLFMMVLVTSVLAHSGACIMPL--ICL----NETKVTSI 547
           PL+ +D+LI + D+     ++ L +  ++T  LA+  +C+ PL  +CL     E  ++S+
Sbjct: 253 PLHIVDLLILVSDQPSERFEVNLNLAHVLTLCLAYINSCLNPLLYVCLGRGFKENLISSL 312

Query: 548 LSLCYF 565
            S+ +F
Sbjct: 313 RSVLHF 318
tr_hit_id A7NUD1
Definition tr|A7NUD1|A7NUD1_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera
Align length 56
Score (bit) 66.6
E-value 1.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947421|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0015_N15, 5'
         (635 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7NUD1|A7NUD1_VITVI Chromosome chr18 scaffold_1, whole genome...    67   1e-09
tr|A5AMI9|A5AMI9_VITVI Putative uncharacterized protein OS=Vitis...    67   1e-09
tr|Q6YUT5|Q6YUT5_ORYSJ Os02g0191300 protein OS=Oryza sativa subs...    66   2e-09
tr|A2X1W3|A2X1W3_ORYSI Putative uncharacterized protein OS=Oryza...    66   2e-09
tr|A7Q3S1|A7Q3S1_VITVI Chromosome chr13 scaffold_48, whole genom...    64   8e-09
tr|B4FGJ0|B4FGJ0_MAIZE Putative uncharacterized protein OS=Zea m...    64   1e-08
tr|A7PAH1|A7PAH1_VITVI Chromosome chr14 scaffold_9, whole genome...    64   1e-08
tr|A5AQT3|A5AQT3_VITVI Putative uncharacterized protein OS=Vitis...    64   1e-08
tr|B7T1N5|B7T1N5_MUSAC Putative uncharacterized protein (Fragmen...    63   1e-08
tr|Q67VL0|Q67VL0_ORYSJ Os06g0633800 protein OS=Oryza sativa subs...    63   2e-08
tr|A3BDT5|A3BDT5_ORYSJ Putative uncharacterized protein OS=Oryza...    63   2e-08
tr|B6TE03|B6TE03_MAIZE Amino acid transporter-like protein OS=Ze...    62   2e-08
tr|B8B0G3|B8B0G3_ORYSI Putative uncharacterized protein OS=Oryza...    61   6e-08
tr|B4FTR3|B4FTR3_MAIZE Putative uncharacterized protein OS=Zea m...    60   1e-07
tr|Q9FMC0|Q9FMC0_ARATH Amino acid transporter-like protein OS=Ar...    59   2e-07
tr|A9RDA9|A9RDA9_PHYPA Predicted protein OS=Physcomitrella paten...    59   2e-07
tr|Q9FNZ8|Q9FNZ8_ORYSJ Os06g0275800 protein OS=Oryza sativa subs...    59   2e-07
tr|A9TRW0|A9TRW0_PHYPA Predicted protein OS=Physcomitrella paten...    59   2e-07
tr|A3BAM6|A3BAM6_ORYSJ Putative uncharacterized protein OS=Oryza...    59   2e-07
tr|A2YBN4|A2YBN4_ORYSI Putative uncharacterized protein OS=Oryza...    59   2e-07
tr|Q9LI61|Q9LI61_ARATH Gb|AAF27127.1 (AT3g30390/T6J22_16) OS=Ara...    56   2e-06
tr|B6UB15|B6UB15_MAIZE Amino acid-polyamine transporter OS=Zea m...    55   4e-06
tr|B7ZZ17|B7ZZ17_MAIZE Putative uncharacterized protein OS=Zea m...    55   5e-06
tr|B4FSF4|B4FSF4_MAIZE Putative uncharacterized protein OS=Zea m...    54   6e-06
tr|Q9LYM2|Q9LYM2_ARATH Putative uncharacterized protein F18O21_1...    53   1e-05
tr|Q5QMB0|Q5QMB0_ORYSJ cDNA clone:J033087L14, full insert sequen...    53   2e-05
tr|Q5QMA9|Q5QMA9_ORYSJ Amino acid transporter-like protein OS=Or...    53   2e-05
tr|Q0JI42|Q0JI42_ORYSJ Os01g0825800 protein (Fragment) OS=Oryza ...    53   2e-05
tr|Q8S8E1|Q8S8E1_ARATH Putative uncharacterized protein At2g4042...    52   4e-05
tr|Q0WQJ3|Q0WQJ3_ARATH Putative uncharacterized protein At2g4042...    52   4e-05

>tr|A7NUD1|A7NUD1_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00015000001
           PE=4 SV=1
          Length = 449

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 30/56 (53%), Positives = 44/56 (78%)
 Frame = +3

Query: 3   TGATAAMCIGFIFPGILCLRDIYEISTKKERLVSWVMVVLAVTTGAIAITSDVLNL 170
           TGATAA+ +GFIFP  + LRD + I+TK +RLVS VM++LAV+   +AI+SD+ ++
Sbjct: 391 TGATAAVAVGFIFPAAIALRDTHGIATKNDRLVSCVMILLAVSASTVAISSDIYSI 446


>tr|A5AMI9|A5AMI9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_034136 PE=4 SV=1
          Length = 468

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 30/56 (53%), Positives = 44/56 (78%)
 Frame = +3

Query: 3   TGATAAMCIGFIFPGILCLRDIYEISTKKERLVSWVMVVLAVTTGAIAITSDVLNL 170
           TGATAA+ +GFIFP  + LRD + I+TK +RLVS VM++LAV+   +AI+SD+ ++
Sbjct: 410 TGATAAVAVGFIFPAAIALRDTHGIATKNDRLVSCVMILLAVSASTVAISSDIYSI 465


>tr|Q6YUT5|Q6YUT5_ORYSJ Os02g0191300 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBb0031B09.32 PE=2 SV=1
          Length = 459

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 29/57 (50%), Positives = 46/57 (80%)
 Frame = +3

Query: 3   TGATAAMCIGFIFPGILCLRDIYEISTKKERLVSWVMVVLAVTTGAIAITSDVLNLL 173
           TGATAA+ IGFIFP ++ LRD Y I+TK++++++  M+VLAV + ++A+ SD LN++
Sbjct: 396 TGATAAVLIGFIFPAMIILRDPYGIATKRDKILALTMIVLAVLSNSVALYSDALNII 452


>tr|A2X1W3|A2X1W3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_06189 PE=4 SV=1
          Length = 459

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 29/57 (50%), Positives = 46/57 (80%)
 Frame = +3

Query: 3   TGATAAMCIGFIFPGILCLRDIYEISTKKERLVSWVMVVLAVTTGAIAITSDVLNLL 173
           TGATAA+ IGFIFP ++ LRD Y I+TK++++++  M+VLAV + ++A+ SD LN++
Sbjct: 396 TGATAAVLIGFIFPAMIILRDPYGIATKRDKILALTMIVLAVLSNSVALYSDALNII 452


>tr|A7Q3S1|A7Q3S1_VITVI Chromosome chr13 scaffold_48, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00029394001
           PE=4 SV=1
          Length = 443

 Score = 63.9 bits (154), Expect = 8e-09
 Identities = 24/59 (40%), Positives = 49/59 (83%)
 Frame = +3

Query: 6   GATAAMCIGFIFPGILCLRDIYEISTKKERLVSWVMVVLAVTTGAIAITSDVLNLLVSE 182
           G+T+A+C+ FIFP  + LRD++ IST+K+R+++ +M++LAV T ++AI++++ +L +++
Sbjct: 384 GSTSAVCLAFIFPAAITLRDVHGISTRKDRVIATIMIILAVATSSVAISTNLYSLFLNK 442


>tr|B4FGJ0|B4FGJ0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 123

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 28/56 (50%), Positives = 43/56 (76%)
 Frame = +3

Query: 3   TGATAAMCIGFIFPGILCLRDIYEISTKKERLVSWVMVVLAVTTGAIAITSDVLNL 170
           TGATAA+ IGFIFP ++ LRD Y +STK++++++  M+VLAV +  +A+ SD  N+
Sbjct: 61  TGATAAVLIGFIFPAMIILRDPYGVSTKRDKVLAVTMIVLAVVSNCVALYSDAFNI 116


>tr|A7PAH1|A7PAH1_VITVI Chromosome chr14 scaffold_9, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00038111001
           PE=4 SV=1
          Length = 462

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 31/62 (50%), Positives = 43/62 (69%)
 Frame = +3

Query: 3   TGATAAMCIGFIFPGILCLRDIYEISTKKERLVSWVMVVLAVTTGAIAITSDVLNLLVSE 182
           TGATAA+CIGFIFP  + LRD + I+TKK+++++  M+ LAV +  +AI SD   L    
Sbjct: 398 TGATAAVCIGFIFPAAITLRDRHSIATKKDKILASFMIALAVFSNLVAIYSDAYALFKKN 457

Query: 183 SS 188
           SS
Sbjct: 458 SS 459


>tr|A5AQT3|A5AQT3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_036511 PE=4 SV=1
          Length = 437

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 31/62 (50%), Positives = 43/62 (69%)
 Frame = +3

Query: 3   TGATAAMCIGFIFPGILCLRDIYEISTKKERLVSWVMVVLAVTTGAIAITSDVLNLLVSE 182
           TGATAA+CIGFIFP  + LRD + I+TKK+++++  M+ LAV +  +AI SD   L    
Sbjct: 373 TGATAAVCIGFIFPAAITLRDRHSIATKKDKILASFMIALAVFSNLVAIYSDAYALFKKN 432

Query: 183 SS 188
           SS
Sbjct: 433 SS 434


>tr|B7T1N5|B7T1N5_MUSAC Putative uncharacterized protein (Fragment)
           OS=Musa acuminata AAA Group PE=2 SV=1
          Length = 391

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 31/64 (48%), Positives = 45/64 (70%)
 Frame = +3

Query: 3   TGATAAMCIGFIFPGILCLRDIYEISTKKERLVSWVMVVLAVTTGAIAITSDVLNLLVSE 182
           TGATAA+CIGFIFP  + LRD + I+TK  ++++  M++LAV + AIAI SD  +L    
Sbjct: 326 TGATAAVCIGFIFPAAITLRDPHGIATKWGKILAVFMIILAVLSNAIAIYSDAYSLFKKT 385

Query: 183 SSTP 194
            ++P
Sbjct: 386 DASP 389


>tr|Q67VL0|Q67VL0_ORYSJ Os06g0633800 protein OS=Oryza sativa subsp.
           japonica GN=P0505A04.37 PE=2 SV=1
          Length = 458

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 28/60 (46%), Positives = 46/60 (76%)
 Frame = +3

Query: 3   TGATAAMCIGFIFPGILCLRDIYEISTKKERLVSWVMVVLAVTTGAIAITSDVLNLLVSE 182
           TGATAA+ IGFIFP ++ LRD Y I++K++++++  M+VLAV + ++A+ SD +N+   E
Sbjct: 396 TGATAAVLIGFIFPAMVILRDPYGIASKRDKILAVTMIVLAVLSNSVALYSDAMNIFRKE 455