DK947454 |
Clone id |
YMU02A01NGRL0015_P08 |
Library |
YMU02 |
Length |
420 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0015_P08. 5' end sequence. |
Accession |
DK947454 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL30Contig1 |
Sequence |
AGAGTGTTATCCCTGCAGCCGTGACTTCCAGAGTGAGTGCCGAAGCTGGTTCTACATTCG GTTGGGAGAAGTATGTAGGCTCCAAAGGCAAAGCAATAGGCATTGACCACTTTGGTGCCA GTGCACCTGCTGGTACCATCTACAAAAAGTTTGGTTTGACTGTGGACAATGTGGTTGCCA ATGCCAAGGAGGTGATGTAAATATACTTTTGTATTTACTCTGCAGTTTTGTAGTAATAAC CTAATTGATTTGAGATGTTCTGATTGGGATGGATTTTAGTCCAATGGATGGTTGCCCATA TGCTGGATTGTGGCACAAATGGCCGCAAGTTTTTGTATTTTTTCTGCTGGGCTTGGAGGT GTAACAAAGGTCCAATCATTTTGCTTTCTAATTAAGGAGTGAAGCTGTTTCACAACATGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7SIC9 |
Definition |
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays |
Align length |
62 |
Score (bit) |
100.0 |
E-value |
2.0e-21 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947454|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0015_P08, 5' (420 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 100 2e-21 sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=... 99 5e-21 sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 97 3e-20 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 95 1e-19 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 94 2e-19 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 91 2e-18 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 86 4e-17 sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=t... 79 5e-15 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 75 8e-14 sp|P27302|TKT1_ECOLI Transketolase 1 OS=Escherichia coli (strain... 75 1e-13 sp|Q9KLW7|TKT2_VIBCH Transketolase 2 OS=Vibrio cholerae GN=tkt2 ... 74 2e-13 sp|Q9KUP2|TKT1_VIBCH Transketolase 1 OS=Vibrio cholerae GN=tkt1 ... 74 2e-13 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 74 3e-13 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 72 9e-13 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 72 9e-13 sp|Q7MDD4|TKT2_VIBVY Transketolase 2 OS=Vibrio vulnificus (strai... 72 1e-12 sp|Q5DZP0|TKT2_VIBF1 Transketolase 2 OS=Vibrio fischeri (strain ... 71 1e-12 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 71 2e-12 sp|Q5E7R1|TKT1_VIBF1 Transketolase 1 OS=Vibrio fischeri (strain ... 70 3e-12 sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (stra... 70 4e-12 sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (stra... 70 4e-12 sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (stra... 70 4e-12 sp|P99161|TKT_STAAN Transketolase OS=Staphylococcus aureus (stra... 70 4e-12 sp|P66962|TKT_STAAM Transketolase OS=Staphylococcus aureus (stra... 70 4e-12 sp|Q5HG77|TKT_STAAC Transketolase OS=Staphylococcus aureus (stra... 70 4e-12 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 70 4e-12 sp|Q7MHK7|TKT1_VIBVY Transketolase 1 OS=Vibrio vulnificus (strai... 70 4e-12 sp|Q8D6H8|TKT2_VIBVU Transketolase 2 OS=Vibrio vulnificus GN=tkt... 69 1e-11 sp|Q87GY4|TKT2_VIBPA Transketolase 2 OS=Vibrio parahaemolyticus ... 69 1e-11 sp|Q8DCA2|TKT1_VIBVU Transketolase 1 OS=Vibrio vulnificus GN=tkt... 69 1e-11
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 100 bits (250), Expect = 2e-21 Identities = 45/62 (72%), Positives = 58/62 (93%) Frame = +3
Query: 3 SVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVAN 182 SV+PAAVT+R+S EAGST GW+KYVG++GKAIGID FGASAPAGTIYK++G+TV++++A Sbjct: 612 SVLPAAVTARISIEAGSTLGWQKYVGAQGKAIGIDKFGASAPAGTIYKEYGITVESIIAA 671
Query: 183 AK 188 AK Sbjct: 672 AK 673
>sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=Craterostigma plantagineum GN=TKT3 PE=1 SV=1 Length = 519
Score = 99.4 bits (246), Expect = 5e-21 Identities = 48/65 (73%), Positives = 58/65 (89%) Frame = +3
Query: 3 SVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVAN 182 SV+P++VT+RVS EAGSTFGW K VGSKGKAIGID FGASAPAG IY++FG+TV+ VVA Sbjct: 455 SVLPSSVTARVSIEAGSTFGWGKIVGSKGKAIGIDRFGASAPAGKIYEEFGITVEAVVAA 514
Query: 183 AKEVM 197 AKE++ Sbjct: 515 AKELI 519
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 97.1 bits (240), Expect = 3e-20 Identities = 46/64 (71%), Positives = 56/64 (87%) Frame = +3
Query: 3 SVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVAN 182 SV+P++VT+RVS EAGSTFGW+K+VG KGKAIGID FGASAPA IYK+FG+T + VVA Sbjct: 677 SVLPSSVTARVSIEAGSTFGWQKFVGDKGKAIGIDGFGASAPADKIYKEFGITAEAVVAA 736
Query: 183 AKEV 194 AK+V Sbjct: 737 AKQV 740
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 95.1 bits (235), Expect = 1e-19 Identities = 42/64 (65%), Positives = 56/64 (87%) Frame = +3
Query: 3 SVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVAN 182 +V+P+ VT+RVS EAGSTFGWE+++G KGKA+GID FGASAPA ++K+FG+TV+ VVA Sbjct: 612 TVLPSGVTARVSVEAGSTFGWERFIGPKGKAVGIDRFGASAPAERLFKEFGITVEAVVAA 671
Query: 183 AKEV 194 AKE+ Sbjct: 672 AKEI 675
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 94.4 bits (233), Expect = 2e-19 Identities = 46/64 (71%), Positives = 54/64 (84%) Frame = +3
Query: 3 SVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVAN 182 SV+P+ VT+RVS EAGSTFGW K VGSKGKAIGID FGASAPAG IY+++G+TV+ VV Sbjct: 677 SVLPSDVTARVSIEAGSTFGWHKIVGSKGKAIGIDKFGASAPAGKIYQEYGITVEAVVEA 736
Query: 183 AKEV 194 AK V Sbjct: 737 AKSV 740
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 90.9 bits (224), Expect = 2e-18 Identities = 42/63 (66%), Positives = 54/63 (85%) Frame = +3
Query: 6 VIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVANA 185 V+P+ VT+RVS EAGSTFGWE++VG KG+A+GID FGASA A +YK+FG+TV+ VVA A Sbjct: 616 VLPSEVTARVSVEAGSTFGWERFVGLKGRAVGIDRFGASASAERLYKEFGITVEAVVAAA 675
Query: 186 KEV 194 KE+ Sbjct: 676 KEL 678
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 86.3 bits (212), Expect = 4e-17 Identities = 38/65 (58%), Positives = 51/65 (78%) Frame = +3
Query: 3 SVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVAN 182 SV+P AVT R++ EA S+FGW KY+GS+G A+ ID FGASAP G +KFG +VDNV+A Sbjct: 605 SVLPKAVTKRLAVEAASSFGWHKYIGSEGDAVTIDRFGASAPGGVCLEKFGFSVDNVLAK 664
Query: 183 AKEVM 197 AK+++ Sbjct: 665 AKQLL 669
>sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=tktA PE=3 SV=1 Length = 665
Score = 79.3 bits (194), Expect = 5e-15 Identities = 38/65 (58%), Positives = 48/65 (73%) Frame = +3
Query: 3 SVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVAN 182 SV+PAAVT RV+ EAG W KYVG G+ IG++ FG SAPA ++K FG TV+NVVA Sbjct: 601 SVLPAAVTKRVAIEAGIADFWYKYVGFNGRVIGMNSFGESAPADQLFKLFGFTVENVVAK 660
Query: 183 AKEVM 197 AKE++ Sbjct: 661 AKEIL 665
>sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN=tktB PE=3 SV=1 Length = 668
Score = 75.5 bits (184), Expect = 8e-14 Identities = 34/65 (52%), Positives = 48/65 (73%) Frame = +3
Query: 3 SVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVAN 182 SV+P+ +T RV+ EAG W KYVG +G+ +G++ FG SAPA ++K FG TV+NVVA Sbjct: 604 SVLPSHITKRVAIEAGIADFWYKYVGFEGRVVGMNSFGESAPADQLFKLFGFTVENVVAK 663
Query: 183 AKEVM 197 AKE++ Sbjct: 664 AKEIL 668
>sp|P27302|TKT1_ECOLI Transketolase 1 OS=Escherichia coli (strain K12) GN=tktA PE=1 SV=5 Length = 663
Score = 75.1 bits (183), Expect = 1e-13 Identities = 36/65 (55%), Positives = 47/65 (72%) Frame = +3
Query: 3 SVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIYKKFGLTVDNVVAN 182 SV+P AVT+RV+ EAG W KYVG G +G+ FG SAPA ++++FG TVDNVVA Sbjct: 599 SVLPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAK 658
Query: 183 AKEVM 197 AKE++ Sbjct: 659 AKELL 663
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SF03 |
Definition |
tr|A9SF03|A9SF03_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
65 |
Score (bit) |
107.0 |
E-value |
3.0e-22 |
Report |
 |