DK947468 |
Clone id |
YMU02A01NGRL0016_A03 |
Library |
YMU02 |
Length |
471 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_A03. 5' end sequence. |
Accession |
DK947468 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL15Contig1 |
Sequence |
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGCGGAAGCAGTGGTATCAACGCAGAGT GGCCATTACGGCCGGGGGGTGAAAGCAGAGTCTCAGTTCAAGGGAGGAGCCCCAGACTTT CAGCCCACCAAGCTCATGACAAGGCTTACGTACACCCTGGATGAGATTGAAGGTCCTTTG GAGGTAGGTGCTGATGGGACTCTCAAATTTGAGGAGCAAGATGGAATCGACTATGCTGCA GTGACCGTTCAGCTCCCTGGGGGTGAAAGGGTGCCCTTCTTGTTCACCATCAAGCAGCTT GTAGCCACAGGAAAGCCTGATGCCTTCAGTGGACAATTCTTGGTGCCTTCATACAGAGGT TCTTCCTTCCTTGACCCTAAGGGCCGTGGTGGCTCCCAAGGATATGACAACGCTGTGGCT ATTCCCGCTGGAGGTGCTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q40459 |
Definition |
sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum |
Align length |
121 |
Score (bit) |
212.0 |
E-value |
5.0e-55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947468|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0016_A03, 5' (365 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chlorop... 212 5e-55 sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chlorop... 212 5e-55 sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chlorop... 209 3e-54 sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chlorop... 207 1e-53 sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chlo... 207 1e-53 sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chlorop... 207 2e-53 sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chlo... 201 7e-52 sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloropla... 200 2e-51 sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chlorop... 183 2e-46 sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1, chlorop... 170 2e-42 sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer protein 1, chlorop... 168 9e-42 sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chlorop... 152 7e-37 sp|P0A431|PSBO_THEEB Photosystem II manganese-stabilizing polype... 132 5e-31 sp|P0A432|PSBO_SYNEN Photosystem II manganese-stabilizing polype... 132 5e-31 sp|P13907|PSBO_ANASP Photosystem II manganese-stabilizing polype... 132 5e-31 sp|Q9R6W6|PSBO_CYAA5 Photosystem II manganese-stabilizing polype... 125 7e-29 sp|P10549|PSBO_SYNY3 Photosystem II manganese-stabilizing polype... 121 1e-27 sp|P11472|PSBO_SYNE7 Photosystem II manganese-stabilizing polype... 120 3e-27 sp|P84989|PSBO_POPEU Oxygen-evolving enhancer protein 1, chlorop... 79 9e-15 sp|P84718|PSBO_PINST Putative oxygen-evolving enhancer protein 1... 51 2e-06 sp|O36027|WSP1_SCHPO Wiskott-Aldrich syndrome protein homolog 1 ... 39 0.011 sp|P81665|PSBO_PINPS Oxygen-evolving enhancer protein 1 (Fragmen... 35 0.089 sp|Q6PIF2|SYCE2_HUMAN Synaptonemal complex central element prote... 34 0.20 sp|Q882P7|Y2578_PSESM UPF0343 protein PSPTO_2578 OS=Pseudomonas ... 31 2.2 sp|Q9P1Z9|K1529_HUMAN Uncharacterized protein KIAA1529 OS=Homo s... 31 2.2 sp|A0JUI0|GATC_ARTS2 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransf... 30 2.9 sp|A2R4T4|SEC16_ASPNC COPII coat assembly protein sec16 OS=Asper... 30 4.9 sp|Q8VDQ1|PTGR2_MOUSE Prostaglandin reductase 2 OS=Mus musculus ... 30 4.9 sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic ... 30 4.9 sp|Q9M5W4|H1_EUPES Histone H1 OS=Euphorbia esula PE=2 SV=1 30 4.9
>sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1 Length = 332
Score = 212 bits (539), Expect = 5e-55 Identities = 103/121 (85%), Positives = 111/121 (91%) Frame = +3
Query: 3 VKAESQFKGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLP 182 VKAES K PDFQ TKLMTRLTYTLDEIEGP EV +DGT+KFEE+DGIDYAAVTVQLP Sbjct: 145 VKAESVNKNAPPDFQKTKLMTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLP 204
Query: 183 GGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGA 362 GGERVPFLFTIKQLVA+GKP++FSG+FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG Sbjct: 205 GGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGR 264
Query: 363 G 365 G Sbjct: 265 G 265
>sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2 Length = 329
Score = 212 bits (539), Expect = 5e-55 Identities = 103/121 (85%), Positives = 110/121 (90%) Frame = +3
Query: 3 VKAESQFKGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLP 182 VKAE K APDFQ TKLMTRLTYTLDEIEGP EV DGT+KFEE+DGIDYAAVTVQLP Sbjct: 142 VKAEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLP 201
Query: 183 GGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGA 362 GGERVPFLFTIKQLVA+GKP++FSG+FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG Sbjct: 202 GGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGR 261
Query: 363 G 365 G Sbjct: 262 G 262
>sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1 Length = 332
Score = 209 bits (533), Expect = 3e-54 Identities = 102/121 (84%), Positives = 109/121 (90%) Frame = +3
Query: 3 VKAESQFKGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLP 182 VKAE K PDFQ TKLMTRLTYTLDEIEGP EV +DGT+KFEE+DGIDYAAVTVQLP Sbjct: 143 VKAEGISKNSGPDFQNTKLMTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLP 202
Query: 183 GGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGA 362 GGERVPFLFTIKQLVA+GKP++FSG FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG Sbjct: 203 GGERVPFLFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGR 262
Query: 363 G 365 G Sbjct: 263 G 263
>sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1 Length = 333
Score = 207 bits (528), Expect = 1e-53 Identities = 102/121 (84%), Positives = 108/121 (89%) Frame = +3
Query: 3 VKAESQFKGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLP 182 VKAE K APDFQ TKLMTRLTYTLDEIEGP EV DGT+KFEE+DGIDYAAVTVQLP Sbjct: 145 VKAEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLP 204
Query: 183 GGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGA 362 GGERVPFLFTIKQLVA+GKP++FS FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG Sbjct: 205 GGERVPFLFTIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGR 264
Query: 363 G 365 G Sbjct: 265 G 265
>sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1 Length = 331
Score = 207 bits (527), Expect = 1e-53 Identities = 99/121 (81%), Positives = 111/121 (91%) Frame = +3
Query: 3 VKAESQFKGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLP 182 VKA+S K PDFQ TKLMTRLTYTLDEIEGP EVG+DG++KF+E+DGIDYAAVTVQLP Sbjct: 144 VKADSVSKNAPPDFQNTKLMTRLTYTLDEIEGPFEVGSDGSVKFKEEDGIDYAAVTVQLP 203
Query: 183 GGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGA 362 GGERVPFLFT+KQL A+GKP++FSG+FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG Sbjct: 204 GGERVPFLFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGR 263
Query: 363 G 365 G Sbjct: 264 G 264
>sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1 Length = 329
Score = 207 bits (526), Expect = 2e-53 Identities = 100/121 (82%), Positives = 108/121 (89%) Frame = +3
Query: 3 VKAESQFKGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLP 182 VKAE K P+FQ TKLMTRLTYTLDEIEGP EV DGT+KFEE+DGIDYAAVTVQLP Sbjct: 142 VKAEGINKNAPPEFQKTKLMTRLTYTLDEIEGPFEVAPDGTVKFEEKDGIDYAAVTVQLP 201
Query: 183 GGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGA 362 GGERVPFLFT+KQLVATGKP++FSG +LVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG Sbjct: 202 GGERVPFLFTVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGR 261
Query: 363 G 365 G Sbjct: 262 G 262
>sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2 Length = 332
Score = 201 bits (512), Expect = 7e-52 Identities = 96/121 (79%), Positives = 109/121 (90%) Frame = +3
Query: 3 VKAESQFKGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLP 182 VKA+S K P+FQ TKLMTRLTYTLDEIEGP EV +DG++ F+E+DGIDYAAVTVQLP Sbjct: 145 VKADSVSKNAPPEFQNTKLMTRLTYTLDEIEGPFEVASDGSVNFKEEDGIDYAAVTVQLP 204
Query: 183 GGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGA 362 GGERVPFLFT+KQL A+GKPD+F+G+FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG Sbjct: 205 GGERVPFLFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGR 264
Query: 363 G 365 G Sbjct: 265 G 265
>sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1 Length = 329
Score = 200 bits (509), Expect = 2e-51 Identities = 99/121 (81%), Positives = 107/121 (88%) Frame = +3
Query: 3 VKAESQFKGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLP 182 VK+E K FQ TKLMTRLTYTLDEIEGP EV ADG++KFEE+DGIDYAAVTVQLP Sbjct: 141 VKSEGVTKNTPLAFQNTKLMTRLTYTLDEIEGPFEVSADGSVKFEEKDGIDYAAVTVQLP 200
Query: 183 GGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGA 362 GGERVPFLFTIKQLVA+GKPD+FSG+FLVPSYRGSSFLDPKGRG S GYDNAVA+PAGG Sbjct: 201 GGERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGR 260
Query: 363 G 365 G Sbjct: 261 G 261
>sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1 Length = 325
Score = 183 bits (465), Expect = 2e-46 Identities = 95/121 (78%), Positives = 101/121 (83%) Frame = +3
Query: 3 VKAESQFKGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLP 182 VKAE K P FQ TKLMTRLTYTLDE+EGPLEV TLKFEE+DGIDYAAVTVQLP Sbjct: 139 VKAEGIQKNEPPRFQKTKLMTRLTYTLDEMEGPLEVRRRRTLKFEEKDGIDYAAVTVQLP 198
Query: 183 GGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGA 362 GGERV FLFT+KQLVATGKP++F FLVPSYRGSSFLDPKGRGGS GYDNA A+P GG Sbjct: 199 GGERVAFLFTVKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGR 257
Query: 363 G 365 G Sbjct: 258 G 258
>sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2 SV=1 Length = 291
Score = 170 bits (431), Expect = 2e-42 Identities = 84/117 (71%), Positives = 92/117 (78%) Frame = +3
Query: 3 VKAESQFKGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLP 182 VK ESQFKGG +F TKLMTRLTYTLD + G +VG+DG+ + +E DGIDYAA TVQLP Sbjct: 106 VKEESQFKGGETEFVKTKLMTRLTYTLDAMSGSFKVGSDGSAELKEDDGIDYAATTVQLP 165
Query: 183 GGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPA 353 GGERV FLFTIKQ G D G FLVPSYRGSSFLDPKGRGGS GYDNAVA+PA Sbjct: 166 GGERVAFLFTIKQFDGKGTLDGIKGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA 222
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6T3B2 |
Definition |
tr|B6T3B2|B6T3B2_MAIZE Oxygen-evolving enhancer protein 1 OS=Zea mays |
Align length |
121 |
Score (bit) |
212.0 |
E-value |
7.0e-54 |
Report |
|