BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947470|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_A05, 5'
         (227 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8N4F7|RN175_HUMAN RING finger protein 175 OS=Homo sapiens GN...    31   2.2  
sp|P49035|SUS1_DAUCA Sucrose synthase isoform 1 OS=Daucus carota...    30   2.9  
sp|Q2NRM0|LPXB_SODGM Lipid-A-disaccharide synthase OS=Sodalis gl...    29   8.5  

>sp|Q8N4F7|RN175_HUMAN RING finger protein 175 OS=Homo sapiens
           GN=RNF175 PE=2 SV=1
          Length = 328

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 67  DMRYQVFNVMVNLHLLYAEQLDLPMYLTLWQSVCVG 174
           D++  + N     H LY + LD   YL  WQ V +G
Sbjct: 281 DLKRMISNPWERTHFLYGQILDWLRYLVAWQPVVIG 316


>sp|P49035|SUS1_DAUCA Sucrose synthase isoform 1 OS=Daucus carota
           PE=2 SV=1
          Length = 808

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 91  VMVNLHLLYAEQLDLPMYLTLWQSVCVGSS 180
           V VN+H L  E+L +P YL   + + +GSS
Sbjct: 100 VRVNVHHLVVEELSVPQYLQFKEELVIGSS 129


>sp|Q2NRM0|LPXB_SODGM Lipid-A-disaccharide synthase OS=Sodalis
           glossinidius (strain morsitans) GN=lpxB PE=3 SV=1
          Length = 382

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 104 SICCMLSNLICPCILHYGNQFVLALLAFSIAEKPWISIVNL 226
           S+ CML+   CP ++ Y  + +   LA  + + PW+S+ NL
Sbjct: 278 SLECMLAK--CPMVVGYRMKPLTFALARRLVKTPWVSLPNL 316

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947470|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_A05, 5'
         (227 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6KXT6|A6KXT6_BACV8 Putative outer membrane protein, probably...    35   1.9  
tr|B6VVB9|B6VVB9_9BACE Putative uncharacterized protein OS=Bacte...    35   1.9  

>tr|A6KXT6|A6KXT6_BACV8 Putative outer membrane protein, probably
           involved in nutrient binding OS=Bacteroides vulgatus
           (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=BVU_0540
           PE=3 SV=1
          Length = 1073

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -1

Query: 224 NLRLKSKVFPQLKRPEEPTQTDCHNVRYMGKSSCSAYNKWRFTITLK 84
           +LR K      +K  E+PTQ D   + Y+G+ + SAY+K+  T +++
Sbjct: 571 DLRTKGLHLASVKTHEQPTQKDYQLLSYLGRINLSAYDKYLLTASVR 617


>tr|B6VVB9|B6VVB9_9BACE Putative uncharacterized protein
           OS=Bacteroides dorei DSM 17855 GN=BACDOR_01227 PE=4 SV=1
          Length = 1073

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -1

Query: 224 NLRLKSKVFPQLKRPEEPTQTDCHNVRYMGKSSCSAYNKWRFTITLK 84
           +LR K      +K  E+PTQ D   + Y+G+ + SAY+K+  T +++
Sbjct: 571 DLRTKGLHLASVKTHEQPTQKDYQLLSYLGRINLSAYDKYLLTASVR 617