DK947476
Clone id YMU02A01NGRL0016_A13
Library
Length 316
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_A13. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGAAGCAGTGGTATCAACGCAG
AGTGGCCATTACGGCCGGGGCTAAGAGGCAGGTGCAGGTCTCCGGCTTCCTTGTCCAGAA
GCCCTCTGTCTAAACTTTCTTAAAGCAAGCCAATTTAGTTGGCATGAATGCCTGCTTCCC
ATTTCCCACTGGCGCCTAACAAGCTTGCTCTTATGAGCTTTTGTGTCCCAGCCACTTTGC
ATACATAATGAAACAACTTCCCTGTGGTGGCTTCACTGCGCAAAAAAAAAAAAAAAAAAA
AAAAAATGTCGCCTGT
■■Homology search results ■■ -
sp_hit_id O59809
Definition sp|O59809|IMA3_SCHPO Probable importin c550.11 OS=Schizosaccharomyces pombe
Align length 42
Score (bit) 29.3
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947476|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_A13, 5'
(202 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O59809|IMA3_SCHPO Probable importin c550.11 OS=Schizosaccharo... 29 6.4

>sp|O59809|IMA3_SCHPO Probable importin c550.11
OS=Schizosaccharomyces pombe GN=SPCC550.11 PE=2 SV=1
Length = 1029

Score = 29.3 bits (64), Expect = 6.4
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +3

Query: 81 WHECLLPISHWRLTS----LLL*AFVSQPLCIHNETTSLWWL 194
+ EC+ P S W L LL+ +FV LC+ E LW L
Sbjct: 330 YEECVKPKSTWALLKPHLQLLIGSFVFPQLCMSEEDEELWEL 371


tr_hit_id B6KRJ8
Definition tr|B6KRJ8|B6KRJ8_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49
Align length 62
Score (bit) 33.9
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947476|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_A13, 5'
(202 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6KRJ8|B6KRJ8_TOXGO Putative uncharacterized protein OS=Toxop... 34 4.1

>tr|B6KRJ8|B6KRJ8_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_077560 PE=4 SV=1
Length = 2419

Score = 33.9 bits (76), Expect = 4.1
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -1

Query: 187 HREVVSLCMQSGWDTKAH-KSKLVRRQWEMGSRHSCQLNWLALRKFRQRASGQGSRRPAP 11
H V C+ S W + ++L R Q +H L W R FR+R +G G R P
Sbjct: 269 HESPVHPCVHSSWLFASDCPNRLCRCQTRDARKHHSLLPWRCRRVFRERPAGLGRDRRGP 328

Query: 10 AS 5
+S
Sbjct: 329 SS 330