DK947482
Clone id YMU02A01NGRL0016_A20
Library
Length 498
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_A20. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GGTCTTTGGAATCTGAGGAAAGACGCATCGGAAAGAAGATAATGACAGAAATTTTGCCTG
CCGGTGAATTTTACCCAGCTGAAGAGTACCATCAACAGTATTTGGAGAAGGGTGGACGCT
CTGGTTTTAAACAATCGGCAAGGAAAGGGTGCACAGACCCCATCAGATGTTATGGGTGAG
ATGGCAATGCTATGGGTGGGATGGCAATGCTGGCTTGAAATGACTTTATTGGACTTTTGG
AATTTAAGTACAGCCCTTGTGGATATTCATTTAAATTGTAATCCAGCTATATCTATGGCT
GGGGGACTCTATATACCTTGATCCTGTATTCAAAATAAGGTTGATTGCCTTCTCTGGCTG
TTCTCAGTCATATTTTTCCAACTTCGAATGTGATTTTCTCATTGAGATATTGTGAATAAA
TTGTGGTGTGTCAACCAATTATGGTGATAAAAAAAAAAAAAAAAAAAAACGAATAAAAAA
AAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P54153
Definition sp|P54153|MSRA_SOLLC Peptide methionine sulfoxide reductase (Fragment) OS=Solanum lycopersicum
Align length 59
Score (bit) 87.0
E-value 3.0e-17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947482|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_A20, 5'
(448 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P54153|MSRA_SOLLC Peptide methionine sulfoxide reductase (Fra... 87 3e-17
sp|Q9SEC2|MSRA_LACSA Peptide methionine sulfoxide reductase OS=L... 86 5e-17
sp|P54151|MSRA_BRANA Peptide methionine sulfoxide reductase OS=B... 86 5e-17
sp|P54150|MSRA_ARATH Peptide methionine sulfoxide reductase OS=A... 86 5e-17
sp|P54152|MSRA_FRAAN Peptide methionine sulfoxide reductase OS=F... 83 6e-16
sp|O26635|MSRA_METTH Peptide methionine sulfoxide reductase msrA... 46 6e-05
sp|Q747V4|MSRA_GEOSL Peptide methionine sulfoxide reductase msrA... 46 8e-05
sp|Q97MV3|MSRA_CLOAB Peptide methionine sulfoxide reductase msrA... 44 4e-04
sp|Q09859|MSRA_SCHPO Probable peptide methionine sulfoxide reduc... 43 5e-04
sp|Q8TQV6|MSRA_METAC Peptide methionine sulfoxide reductase msrA... 43 5e-04
sp|Q551H3|MSRA_DICDI Peptide methionine sulfoxide reductase OS=D... 43 5e-04
sp|A8FEA4|MSRA_BACP2 Peptide methionine sulfoxide reductase msrA... 43 5e-04
sp|Q8PUD6|MSRA_METMA Peptide methionine sulfoxide reductase msrA... 43 7e-04
sp|Q6LYY1|MSRA_METMP Peptide methionine sulfoxide reductase msrA... 42 9e-04
sp|Q6LV65|MSRA_PHOPR Peptide methionine sulfoxide reductase msrA... 42 0.001
sp|Q9CN40|MSRA_PASMU Peptide methionine sulfoxide reductase msrA... 42 0.001
sp|Q0SPW9|MSRA_CLOPS Peptide methionine sulfoxide reductase msrA... 42 0.001
sp|Q8XH97|MSRA_CLOPE Peptide methionine sulfoxide reductase msrA... 42 0.001
sp|Q0TM63|MSRA_CLOP1 Peptide methionine sulfoxide reductase msrA... 42 0.001
sp|Q4J9L3|MSRA_SULAC Peptide methionine sulfoxide reductase msrA... 42 0.002
sp|Q65ID1|MSRA_BACLD Peptide methionine sulfoxide reductase msrA... 42 0.002
sp|Q97Y45|MSRA_SULSO Peptide methionine sulfoxide reductase msrA... 41 0.003
sp|Q39Z11|MSRA_GEOMG Peptide methionine sulfoxide reductase msrA... 41 0.003
sp|A6TUE9|MSRA_ALKMQ Peptide methionine sulfoxide reductase msrA... 41 0.003
sp|P72622|MSRA1_SYNY3 Peptide methionine sulfoxide reductase msr... 41 0.003
sp|Q6D151|MSRA_ERWCT Peptide methionine sulfoxide reductase msrA... 40 0.003
sp|Q9A9I6|MSRA1_CAUCR Peptide methionine sulfoxide reductase msr... 40 0.004
sp|Q87SW6|MSRA_VIBPA Peptide methionine sulfoxide reductase msrA... 40 0.006
sp|Q9KP30|MSRA_VIBCH Peptide methionine sulfoxide reductase msrA... 40 0.006
sp|A5F587|MSRA_VIBC3 Peptide methionine sulfoxide reductase msrA... 40 0.006

>sp|P54153|MSRA_SOLLC Peptide methionine sulfoxide reductase
(Fragment) OS=Solanum lycopersicum GN=E4 PE=3 SV=1
Length = 196

Score = 87.0 bits (214), Expect = 3e-17
Identities = 42/59 (71%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
Frame = +3

Query: 3 SLESEERR-IGKKIMTEILPAGEFYPAEEYHQQYLEKGGRSGFKQSARKGCTDPIRCYG 176
SLE++++ + KKI+TEILPA FY AEEYHQQYLEKGG G KQSA KGC DPIRCYG
Sbjct: 138 SLEAKQKEFMDKKIVTEILPAKRFYRAEEYHQQYLEKGGGRGCKQSAAKGCNDPIRCYG 196


>sp|Q9SEC2|MSRA_LACSA Peptide methionine sulfoxide reductase
OS=Lactuca sativa PE=2 SV=1
Length = 259

Score = 86.3 bits (212), Expect = 5e-17
Identities = 36/56 (64%), Positives = 45/56 (80%)
Frame = +3

Query: 9 ESEERRIGKKIMTEILPAGEFYPAEEYHQQYLEKGGRSGFKQSARKGCTDPIRCYG 176
E ++++ + ++TEILPA +FY AEEYHQQYL KGGR GF+QS KGC DPIRCYG
Sbjct: 204 ERHQKKLNRTVVTEILPAKKFYRAEEYHQQYLAKGGRFGFRQSTEKGCNDPIRCYG 259


>sp|P54151|MSRA_BRANA Peptide methionine sulfoxide reductase
OS=Brassica napus GN=PMSR PE=2 SV=1
Length = 257

Score = 86.3 bits (212), Expect = 5e-17
Identities = 37/58 (63%), Positives = 46/58 (79%)
Frame = +3

Query: 3 SLESEERRIGKKIMTEILPAGEFYPAEEYHQQYLEKGGRSGFKQSARKGCTDPIRCYG 176
++E +++ + +KI+TEILPA +FY AE YHQQYL KGGR G QSA KGC DPIRCYG
Sbjct: 200 AMEKQQKILNRKIVTEILPATKFYRAENYHQQYLAKGGRMGLSQSAEKGCNDPIRCYG 257


>sp|P54150|MSRA_ARATH Peptide methionine sulfoxide reductase
OS=Arabidopsis thaliana GN=PMSR PE=1 SV=2
Length = 258

Score = 86.3 bits (212), Expect = 5e-17
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = +3

Query: 3 SLESEERRIGKKIMTEILPAGEFYPAEEYHQQYLEKGGRSGFKQSARKGCTDPIRCYG 176
++E +++ + K+I+TEILPA +FY AE YHQQYL KGGR G +QSA KGC DPIRCYG
Sbjct: 201 AVEKQQKILNKRIVTEILPATKFYRAENYHQQYLAKGGRMGLRQSAEKGCKDPIRCYG 258


>sp|P54152|MSRA_FRAAN Peptide methionine sulfoxide reductase
OS=Fragaria ananassa PE=2 SV=2
Length = 191

Score = 82.8 bits (203), Expect = 6e-16
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +3

Query: 33 KKIMTEILPAGEFYPAEEYHQQYLEKGGRSGFKQSARKGCTDPIRCYG 176
K+++TEILPA FY AEEYHQQYLEKGG +G KQSA+KGC DPI+CYG
Sbjct: 144 KRVVTEILPAKRFYRAEEYHQQYLEKGGGNGNKQSAQKGCNDPIKCYG 191


>sp|O26635|MSRA_METTH Peptide methionine sulfoxide reductase msrA
OS=Methanobacterium thermoautotrophicum GN=msrA PE=3
SV=1
Length = 169

Score = 46.2 bits (108), Expect = 6e-05
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = +3

Query: 15 EERRIGKKIMTEILPAGEFYPAEEYHQQYLEKGGR 119
E R +I+T I PAG FY AEEYHQQYLEK R
Sbjct: 123 ESGRFRDRIVTAIEPAGTFYEAEEYHQQYLEKNPR 157


>sp|Q747V4|MSRA_GEOSL Peptide methionine sulfoxide reductase msrA
OS=Geobacter sulfurreducens GN=msrA PE=3 SV=1
Length = 162

Score = 45.8 bits (107), Expect = 8e-05
Identities = 24/40 (60%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Frame = +3

Query: 3 SLESEER--RIGKKIMTEILPAGEFYPAEEYHQQYLEKGG 116
SLE E+R R + I+TEI+PA F+ AEEYHQ YLEK G
Sbjct: 117 SLEHEQRSGRHARPIVTEIVPAATFWWAEEYHQHYLEKRG 156


>sp|Q97MV3|MSRA_CLOAB Peptide methionine sulfoxide reductase msrA
OS=Clostridium acetobutylicum GN=msrA PE=3 SV=1
Length = 162

Score = 43.5 bits (101), Expect = 4e-04
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +3

Query: 3 SLESEERRIGKKIMTEILPAGEFYPAEEYHQQYLEK 110
S + E+ + I+TEILP FY AEEYHQ+YL+K
Sbjct: 111 SKDKEQEKYDAPIVTEILPLKNFYDAEEYHQKYLDK 146


>sp|Q09859|MSRA_SCHPO Probable peptide methionine sulfoxide
reductase OS=Schizosaccharomyces pombe GN=SPAC29E6.05c
PE=2 SV=2
Length = 170

Score = 43.1 bits (100), Expect = 5e-04
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = +3

Query: 33 KKIMTEILPAGEFYPAEEYHQQYLEK 110
KKI+T+ILPAG+++ AE+YHQ YLEK
Sbjct: 127 KKIVTQILPAGKWWDAEDYHQLYLEK 152


>sp|Q8TQV6|MSRA_METAC Peptide methionine sulfoxide reductase msrA
OS=Methanosarcina acetivorans GN=msrA PE=3 SV=1
Length = 188

Score = 43.1 bits (100), Expect = 5e-04
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +3

Query: 39 IMTEILPAGEFYPAEEYHQQYLEKGG 116
I+TEI+P EFY AE+YHQQY EK G
Sbjct: 152 IVTEIVPVSEFYMAEDYHQQYFEKKG 177


tr_hit_id B7FJB1
Definition tr|B7FJB1|B7FJB1_MEDTR Putative uncharacterized protein OS=Medicago truncatula
Align length 58
Score (bit) 100.0
E-value 5.0e-20
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947482|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_A20, 5'
(448 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7FJB1|B7FJB1_MEDTR Putative uncharacterized protein OS=Medic... 100 5e-20
tr|A9NKJ7|A9NKJ7_PICSI Putative uncharacterized protein OS=Picea... 95 1e-18
tr|A7PBQ8|A7PBQ8_VITVI Chromosome chr16 scaffold_10, whole genom... 94 3e-18
tr|B7FFP2|B7FFP2_MEDTR Putative uncharacterized protein (Fragmen... 94 4e-18
tr|A9U2S4|A9U2S4_PHYPA Predicted protein OS=Physcomitrella paten... 94 4e-18
tr|B6U8S9|B6U8S9_MAIZE Peptide methionine sulfoxide reductase OS... 92 1e-17
tr|Q6QPJ4|Q6QPJ4_POPJC Methionine sulfoxide reductase A OS=Popul... 92 2e-17
tr|A9PFX3|A9PFX3_POPTR Putative uncharacterized protein OS=Popul... 91 3e-17
tr|Q9AY51|Q9AY51_ORYSA Putative peptide methionine sulfoxide red... 91 4e-17
tr|Q84L12|Q84L12_GOSBA Peptide methionine sulfoxide reductase OS... 91 4e-17
tr|Q336R9|Q336R9_ORYSJ Os10g0563600 protein OS=Oryza sativa subs... 91 4e-17
tr|A3C7D2|A3C7D2_ORYSJ Putative uncharacterized protein OS=Oryza... 91 4e-17
tr|A2ZAA6|A2ZAA6_ORYSI Putative uncharacterized protein OS=Oryza... 91 4e-17
tr|Q9FKF7|Q9FKF7_ARATH Peptide methionine sulfoxide reductase (A... 88 2e-16
tr|A7PCM0|A7PCM0_VITVI Chromosome chr17 scaffold_12, whole genom... 88 2e-16
tr|Q8LAX4|Q8LAX4_ARATH Protein-methionine-S-oxide reductase OS=A... 87 3e-16
tr|A9NUG2|A9NUG2_PICSI Putative uncharacterized protein OS=Picea... 87 4e-16
tr|A9NR21|A9NR21_PICSI Putative uncharacterized protein OS=Picea... 87 4e-16
tr|Q94A72|Q94A72_ARATH AT4g25130/F13M23_270 OS=Arabidopsis thali... 87 5e-16
tr|Q6V5E5|Q6V5E5_OLIPU Peptide methionine sulfoxide reductase OS... 86 9e-16
tr|Q6V5D1|Q6V5D1_CARAS Peptide methionine sulfoxide reductase OS... 86 9e-16
tr|Q9LY14|Q9LY14_ARATH Peptide methionine sulfoxide reductase (M... 85 2e-15
tr|Q8LBR1|Q8LBR1_ARATH Peptide methionine sulfoxide reductase (M... 85 2e-15
tr|Q8GX95|Q8GX95_ARATH Putative peptide methionine sulfoxide red... 85 2e-15
tr|Q6V5K7|Q6V5K7_BRAOL Peptide methionine sulfoxide reductase OS... 84 3e-15
tr|A9TSA4|A9TSA4_PHYPA Predicted protein OS=Physcomitrella paten... 84 3e-15
tr|Q9LY15|Q9LY15_ARATH Peptide methionine sulfoxide reductase-li... 82 1e-14
tr|A9SNB5|A9SNB5_PHYPA Predicted protein OS=Physcomitrella paten... 82 1e-14
tr|Q6V5E6|Q6V5E6_OLIPU Peptide methionine sulfoxide reductase OS... 82 2e-14
tr|Q6V5D2|Q6V5D2_CARAS Peptide methionine sulfoxide reductase OS... 81 2e-14

>tr|B7FJB1|B7FJB1_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 265

Score = 100 bits (248), Expect = 5e-20
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +3

Query: 3 SLESEERRIGKKIMTEILPAGEFYPAEEYHQQYLEKGGRSGFKQSARKGCTDPIRCYG 176
SLE +E+++G+KI TEILPA +FY AEEYHQQYLEKGGR GFKQSA KGC DPIRCYG
Sbjct: 208 SLEQQEKQLGRKIATEILPAKKFYRAEEYHQQYLEKGGRFGFKQSAAKGCNDPIRCYG 265


>tr|A9NKJ7|A9NKJ7_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 209

Score = 95.1 bits (235), Expect = 1e-18
Identities = 41/58 (70%), Positives = 51/58 (87%)
Frame = +3

Query: 3 SLESEERRIGKKIMTEILPAGEFYPAEEYHQQYLEKGGRSGFKQSARKGCTDPIRCYG 176
++E +++ + +KI+TEILPA +FY AEEYHQQYLEKGGR+GFKQSA KGC DPIRCYG
Sbjct: 152 TMEKQQKVLNRKIVTEILPAKKFYRAEEYHQQYLEKGGRAGFKQSAAKGCNDPIRCYG 209


>tr|A7PBQ8|A7PBQ8_VITVI Chromosome chr16 scaffold_10, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00014205001
PE=4 SV=1
Length = 206

Score = 94.4 bits (233), Expect = 3e-18
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +3

Query: 3 SLESEERRIGKKIMTEILPAGEFYPAEEYHQQYLEKGGRSGFKQSARKGCTDPIRCYG 176
SLE ++ + +KI+TEILPA +FY AEEYHQQYLEKGGR GFKQS+ KGC DPIRCYG
Sbjct: 149 SLEQHQKLMNRKIVTEILPAKKFYRAEEYHQQYLEKGGRFGFKQSSEKGCNDPIRCYG 206


>tr|B7FFP2|B7FFP2_MEDTR Putative uncharacterized protein (Fragment)
OS=Medicago truncatula PE=2 SV=1
Length = 79

Score = 93.6 bits (231), Expect = 4e-18
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = +3

Query: 3 SLESEERRIGKKIMTEILPAGEFYPAEEYHQQYLEKGGRSGFKQSARKGCTDPIRCYG 176
SLE +++++ +KI+TEILPA +FY AEEYHQQYLEKGGR G KQS+ KGC DPIRCYG
Sbjct: 22 SLEQQQKKLNRKIVTEILPAKKFYRAEEYHQQYLEKGGRFGCKQSSSKGCNDPIRCYG 79


>tr|A9U2S4|A9U2S4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_109244 PE=4 SV=1
Length = 272

Score = 93.6 bits (231), Expect = 4e-18
Identities = 42/58 (72%), Positives = 48/58 (82%)
Frame = +3

Query: 3 SLESEERRIGKKIMTEILPAGEFYPAEEYHQQYLEKGGRSGFKQSARKGCTDPIRCYG 176
SLE+ +R + +KI+TEILPA +FY AE YHQQYL KGGR GFKQSA KGC DPIRCYG
Sbjct: 215 SLENHQRSLNRKIVTEILPAKKFYRAENYHQQYLAKGGRMGFKQSAEKGCKDPIRCYG 272


>tr|B6U8S9|B6U8S9_MAIZE Peptide methionine sulfoxide reductase
OS=Zea mays PE=2 SV=1
Length = 259

Score = 92.0 bits (227), Expect = 1e-17
Identities = 41/58 (70%), Positives = 48/58 (82%)
Frame = +3

Query: 3 SLESEERRIGKKIMTEILPAGEFYPAEEYHQQYLEKGGRSGFKQSARKGCTDPIRCYG 176
SLE +++ + +KI+TEI+PA FY AEEYHQQYLEKGGR GF QSA KGC DPIRCYG
Sbjct: 202 SLEKQQKLLNRKIVTEIVPAKRFYRAEEYHQQYLEKGGRFGFGQSAAKGCNDPIRCYG 259


>tr|Q6QPJ4|Q6QPJ4_POPJC Methionine sulfoxide reductase A OS=Populus
jackii PE=2 SV=1
Length = 261

Score = 91.7 bits (226), Expect = 2e-17
Identities = 41/58 (70%), Positives = 48/58 (82%)
Frame = +3

Query: 3 SLESEERRIGKKIMTEILPAGEFYPAEEYHQQYLEKGGRSGFKQSARKGCTDPIRCYG 176
SLE +++ + +KI+TEILPA +FY AEEYHQQYL KGGR GF QSA KGC DPIRCYG
Sbjct: 204 SLERQQKLLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFMQSAEKGCNDPIRCYG 261


>tr|A9PFX3|A9PFX3_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 260

Score = 90.9 bits (224), Expect = 3e-17
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = +3

Query: 3 SLESEERRIGKKIMTEILPAGEFYPAEEYHQQYLEKGGRSGFKQSARKGCTDPIRCYG 176
S+E +++ +KI+TEILPA +FY AEEYHQQYL KGGR GFKQS+ KGC DPIRCYG
Sbjct: 203 SMEQQQKLSNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSSEKGCNDPIRCYG 260


>tr|Q9AY51|Q9AY51_ORYSA Putative peptide methionine sulfoxide
reductase OS=Oryza sativa GN=OSJNBa0027P10.3 PE=4 SV=1
Length = 205

Score = 90.5 bits (223), Expect = 4e-17
Identities = 40/58 (68%), Positives = 47/58 (81%)
Frame = +3

Query: 3 SLESEERRIGKKIMTEILPAGEFYPAEEYHQQYLEKGGRSGFKQSARKGCTDPIRCYG 176
SLE +++ + + I+TEILPA FY AEEYHQQYL KGGR GF+QSA KGC DPIRCYG
Sbjct: 148 SLEKQQKLLNRTIVTEILPAKRFYRAEEYHQQYLAKGGRFGFRQSAEKGCNDPIRCYG 205


>tr|Q84L12|Q84L12_GOSBA Peptide methionine sulfoxide reductase
OS=Gossypium barbadense GN=PMSR PE=2 SV=1
Length = 255

Score = 90.5 bits (223), Expect = 4e-17
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = +3

Query: 3 SLESEERRIGKKIMTEILPAGEFYPAEEYHQQYLEKGGRSGFKQSARKGCTDPIRCYG 176
S+E +++ + +KI+TEILPA +FY AEEYHQQYL KGGR G KQSA KGC DPIRCYG
Sbjct: 198 SMEKQQKLLNRKIVTEILPARKFYRAEEYHQQYLAKGGRFGCKQSAEKGCNDPIRCYG 255