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DK947493
Clone id YMU02A01NGRL0016_B08
Library
Length 267
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_B08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GCATGGATGAGAATGACCTTTTGACAGAGGATGAGCCAACCTTCACCGCCAAGGTCTCCA
CCCCTGGCACCTACACCTACTACTGCACCCCTCACAAGTCTGCTAACATGGTTGGTACCA
TCATTGTCAAGTGAATTACATGACCCACCTCATACACAAATCCCCCTCTTCTGTGTTCTG
TAGATGAGCCCCCCATTGTACTCTTGCGCCCATATATTGAACTAAATTCGTTCAAGTAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q7SIB8
Definition sp|Q7SIB8|PLAS_DRYCA Plastocyanin OS=Dryopteris crassirhizoma
Align length 43
Score (bit) 81.6
E-value 1.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947493|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_B08, 5'
         (237 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7SIB8|PLAS_DRYCA Plastocyanin OS=Dryopteris crassirhizoma GN...    82   1e-15
sp|Q5N4W8|PLAS_SYNP6 Plastocyanin OS=Synechococcus sp. (strain A...    50   3e-06
sp|P55020|PLAS_SYNE7 Plastocyanin OS=Synechococcus elongatus (st...    50   3e-06
sp|P42699|PLAS2_ARATH Plastocyanin major isoform, chloroplastic ...    49   8e-06
sp|P00294|PLAS_CAPBU Plastocyanin OS=Capsella bursa-pastoris GN=...    49   1e-05
sp|P11970|PLAS2_POPNI Plastocyanin B, chloroplastic OS=Populus n...    48   1e-05
sp|P17340|PLAS_SOLLC Plastocyanin, chloroplastic OS=Solanum lyco...    47   2e-05
sp|P35477|PLAS2_TOBAC Plastocyanin B'/B'' OS=Nicotiana tabacum P...    47   2e-05
sp|P00288|PLAS_VICFA Plastocyanin OS=Vicia faba GN=PETE PE=1 SV=1      47   4e-05
sp|P21697|PLAS_SYNY3 Plastocyanin OS=Synechocystis sp. (strain P...    47   4e-05
sp|P00296|PLAS_SOLTU Plastocyanin OS=Solanum tuberosum GN=PETE P...    47   4e-05
sp|P00298|PLAS_RUMOB Plastocyanin OS=Rumex obtusifolius GN=PETE ...    47   4e-05
sp|P16002|PLAS_PEA Plastocyanin, chloroplastic OS=Pisum sativum ...    47   4e-05
sp|P00297|PLAS_SOLCR Plastocyanin OS=Solanum crispum GN=PETE PE=...    46   5e-05
sp|P50057|PLAS_PROHO Plastocyanin OS=Prochlorothrix hollandica G...    46   5e-05
sp|P00291|PLAS_SAMNI Plastocyanin OS=Sambucus nigra GN=PETE PE=1...    45   1e-04
sp|P00287|PLAS_PHAVU Plastocyanin OS=Phaseolus vulgaris GN=PETE ...    45   1e-04
sp|P00295|PLAS_MERPE Plastocyanin OS=Mercurialis perennis GN=PET...    45   1e-04
sp|P00299|PLAS1_POPNI Plastocyanin A, chloroplastic OS=Populus n...    45   1e-04
sp|P00290|PLAS_LACSA Plastocyanin OS=Lactuca sativa GN=PETE PE=1...    45   1e-04
sp|P11490|PLAS1_ARATH Plastocyanin minor isoform, chloroplastic ...    45   1e-04
sp|P00289|PLAS_SPIOL Plastocyanin, chloroplastic OS=Spinacia ole...    44   3e-04
sp|P26956|PLAS_SCEOB Plastocyanin, chloroplastic OS=Scenedesmus ...    44   3e-04
sp|P35476|PLAS1_TOBAC Plastocyanin A'/A'' OS=Nicotiana tabacum P...    44   3e-04
sp|P08248|PLAS_HORVU Plastocyanin, chloroplastic OS=Hordeum vulg...    43   4e-04
sp|O22646|PLAS_FRIAG Plastocyanin, chloroplastic OS=Fritillaria ...    43   4e-04
sp|P18068|PLAS_CHLRE Plastocyanin, chloroplastic OS=Chlamydomona...    43   4e-04
sp|P00300|PLAS_CHLFU Plastocyanin OS=Chlorella fusca GN=petE PE=...    43   6e-04
sp|P00293|PLAS_CUCSA Plastocyanin OS=Cucumis sativus GN=PETE PE=...    42   0.001
sp|P00292|PLAS_CUCPE Plastocyanin OS=Cucurbita pepo GN=PETE PE=1...    42   0.001

>sp|Q7SIB8|PLAS_DRYCA Plastocyanin OS=Dryopteris crassirhizoma
           GN=PETE PE=1 SV=1
          Length = 102

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 36/43 (83%), Positives = 40/43 (93%)
 Frame = +3

Query: 3   MDENDLLTEDEPTFTAKVSTPGTYTYYCTPHKSANMVGTIIVK 131
           MDENDLL+EDEP+F AKVSTPGTYT+YCTPHKSANM GT+ VK
Sbjct: 60  MDENDLLSEDEPSFKAKVSTPGTYTFYCTPHKSANMKGTLTVK 102


>sp|Q5N4W8|PLAS_SYNP6 Plastocyanin OS=Synechococcus sp. (strain ATCC
           27144 / PCC 6301 / SAUG 1402/1) GN=petE PE=3 SV=1
          Length = 125

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 22/43 (51%), Positives = 26/43 (60%)
 Frame = +3

Query: 3   MDENDLLTEDEPTFTAKVSTPGTYTYYCTPHKSANMVGTIIVK 131
           +   DL      TF A  S PGTYTYYC PH+ A MVG I+V+
Sbjct: 83  LSHKDLAFSPGETFEATFSEPGTYTYYCEPHRGAGMVGKIVVQ 125


>sp|P55020|PLAS_SYNE7 Plastocyanin OS=Synechococcus elongatus
           (strain PCC 7942) GN=petE PE=1 SV=1
          Length = 125

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 22/43 (51%), Positives = 26/43 (60%)
 Frame = +3

Query: 3   MDENDLLTEDEPTFTAKVSTPGTYTYYCTPHKSANMVGTIIVK 131
           +   DL      TF A  S PGTYTYYC PH+ A MVG I+V+
Sbjct: 83  LSHKDLAFSPGETFEATFSEPGTYTYYCEPHRGAGMVGKIVVQ 125


>sp|P42699|PLAS2_ARATH Plastocyanin major isoform, chloroplastic
           OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2
          Length = 167

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +3

Query: 3   MDENDLLTEDEPTFTAKVSTPGTYTYYCTPHKSANMVGTIIV 128
           MDE DLL     T+   ++ PGTY++YC PH+ A MVG + V
Sbjct: 125 MDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTV 166


>sp|P00294|PLAS_CAPBU Plastocyanin OS=Capsella bursa-pastoris
           GN=PETE PE=1 SV=1
          Length = 99

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +3

Query: 3   MDENDLLTEDEPTFTAKVSTPGTYTYYCTPHKSANMVGTIIV 128
           MDENDLL     T+   ++  GTY++YC PH+ A MVG + V
Sbjct: 57  MDENDLLNAAGETYEVALTEAGTYSFYCAPHQGAGMVGKVTV 98


>sp|P11970|PLAS2_POPNI Plastocyanin B, chloroplastic OS=Populus
           nigra GN=PETE PE=1 SV=2
          Length = 168

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 21/42 (50%), Positives = 26/42 (61%)
 Frame = +3

Query: 3   MDENDLLTEDEPTFTAKVSTPGTYTYYCTPHKSANMVGTIIV 128
           M E DLL     TF   +S  G YT+YC+PH+ A MVG +IV
Sbjct: 126 MSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIV 167


>sp|P17340|PLAS_SOLLC Plastocyanin, chloroplastic OS=Solanum
           lycopersicum GN=PETE PE=2 SV=1
          Length = 170

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = +3

Query: 3   MDENDLLTEDEPTFTAKVSTPGTYTYYCTPHKSANMVGTIIV 128
           M E DLL     T++  +S  GTYT+YC PH+ A MVG + V
Sbjct: 128 MSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTV 169


>sp|P35477|PLAS2_TOBAC Plastocyanin B'/B'' OS=Nicotiana tabacum PE=1
           SV=1
          Length = 99

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = +3

Query: 3   MDENDLLTEDEPTFTAKVSTPGTYTYYCTPHKSANMVGTIIV 128
           M E DLL     T++  +S  GTYT+YC PH+ A MVG + V
Sbjct: 57  MSEEDLLNGPGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTV 98


>sp|P00288|PLAS_VICFA Plastocyanin OS=Vicia faba GN=PETE PE=1 SV=1
          Length = 99

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 19/42 (45%), Positives = 26/42 (61%)
 Frame = +3

Query: 3   MDENDLLTEDEPTFTAKVSTPGTYTYYCTPHKSANMVGTIIV 128
           M E DLL     T++ K+   GTY +YC+PH+ A MVG + V
Sbjct: 57  MPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTV 98


>sp|P21697|PLAS_SYNY3 Plastocyanin OS=Synechocystis sp. (strain PCC
           6803) GN=petE PE=1 SV=1
          Length = 126

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = +3

Query: 39  TFTAKVSTPGTYTYYCTPHKSANMVGTIIVK 131
           +FT+  + PGTYTYYC PH+ A MVG ++V+
Sbjct: 96  SFTSTFTEPGTYTYYCEPHRGAGMVGKVVVE 126
tr_hit_id A9PJU8
Definition tr|A9PJU8|A9PJU8_POPJC Putative uncharacterized protein OS=Populus jackii
Align length 42
Score (bit) 48.1
E-value 0.0002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947493|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_B08, 5'
         (237 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9PJU8|A9PJU8_POPJC Putative uncharacterized protein OS=Popul...    48   2e-04
tr|A9PG34|A9PG34_POPTR Putative uncharacterized protein OS=Popul...    48   2e-04
tr|B7K170|B7K170_SYNP8 Plastocyanin OS=Synechococcus sp. (strain...    48   3e-04
tr|B4C3N8|B4C3N8_9CHRO Plastocyanin OS=Cyanothece sp. PCC 8802 G...    48   3e-04
tr|B7KAE8|B7KAE8_9CHRO Plastocyanin OS=Cyanothece sp. PCC 7424 G...    47   5e-04
tr|B4B8S2|B4B8S2_9CHRO Plastocyanin OS=Cyanothece sp. PCC 7822 G...    47   5e-04
tr|B0JHN7|B0JHN7_MICAN Plastocyanin OS=Microcystis aeruginosa (s...    47   6e-04
tr|A8YB36|A8YB36_MICAE Genome sequencing data, contig C266 OS=Mi...    47   6e-04
tr|A7D2K9|A7D2K9_9EURY Shikimate kinase OS=Halorubrum lacusprofu...    47   6e-04
tr|Q1EMM9|Q1EMM9_PLAMJ Plastocyanine (Fragment) OS=Plantago majo...    46   8e-04
tr|A3IMH3|A3IMH3_9CHRO Plastocyanin OS=Cyanothece sp. CCY 0110 G...    45   0.001
tr|Q1WLY5|Q1WLY5_CHLIN Chloroplast plastocyanin OS=Chlamydomonas...    45   0.002
tr|A9PK67|A9PK67_POPJC Putative uncharacterized protein OS=Popul...    44   0.003
tr|Q6RUN5|Q6RUN5_TOBAC ERT10 (Fragment) OS=Nicotiana tabacum GN=...    44   0.004
tr|A9NL56|A9NL56_PICSI Putative uncharacterized protein OS=Picea...    44   0.004
tr|A4S360|A4S360_OSTLU Plastocyanin, chloroplast OS=Ostreococcus...    44   0.004
tr|B7FH62|B7FH62_MEDTR Putative uncharacterized protein OS=Medic...    44   0.005
tr|A7NVP7|A7NVP7_VITVI Chromosome chr18 scaffold_1, whole genome...    44   0.005
tr|A5ALX7|A5ALX7_VITVI Putative uncharacterized protein OS=Vitis...    44   0.005
tr|Q5V725|Q5V725_HALMA Halocyanin-like OS=Haloarcula marismortui...    44   0.005
tr|A1KYG6|A1KYG6_CYAA5 Plastocyanin OS=Cyanothece (strain ATCC 5...    43   0.007
tr|Q4C0W9|Q4C0W9_CROWT Blue (Type 1) copper domain OS=Crocosphae...    43   0.007
tr|B4WSM5|B4WSM5_9SYNE Plastocyanin OS=Synechococcus sp. PCC 733...    43   0.007
tr|A8JH68|A8JH68_CHLRE Plastocyanin, chloroplast OS=Chlamydomona...    43   0.007
tr|Q2JHE1|Q2JHE1_SYNJB Plastocyanin OS=Synechococcus sp. (strain...    43   0.009
tr|Q4R1A7|Q4R1A7_PEDDU Plastocyanin OS=Pediastrum duplex GN=Pcy ...    43   0.009
tr|Q2JU60|Q2JU60_SYNJA Plastocyanin OS=Synechococcus sp. (strain...    42   0.012
tr|Q9ST31|Q9ST31_PEDBO Pre-apoplastocyanin (Plastocyanin) OS=Ped...    42   0.012
tr|B1X5Q6|B1X5Q6_PAUCH Plastocyanin OS=Paulinella chromatophora ...    42   0.012
tr|A3PBV5|A3PBV5_PROM0 Plastocyanin OS=Prochlorococcus marinus (...    42   0.015

>tr|A9PJU8|A9PJU8_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 168

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 21/42 (50%), Positives = 26/42 (61%)
 Frame = +3

Query: 3   MDENDLLTEDEPTFTAKVSTPGTYTYYCTPHKSANMVGTIIV 128
           M E DLL     TF   +S  G YT+YC+PH+ A MVG +IV
Sbjct: 126 MSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIV 167


>tr|A9PG34|A9PG34_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 168

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 21/42 (50%), Positives = 26/42 (61%)
 Frame = +3

Query: 3   MDENDLLTEDEPTFTAKVSTPGTYTYYCTPHKSANMVGTIIV 128
           M E DLL     TF   +S  G YT+YC+PH+ A MVG +IV
Sbjct: 126 MSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIV 167


>tr|B7K170|B7K170_SYNP8 Plastocyanin OS=Synechococcus sp. (strain
           PCC 8801 / RF-1) GN=PCC8801_2240 PE=3 SV=1
          Length = 119

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 21/43 (48%), Positives = 25/43 (58%)
 Frame = +3

Query: 3   MDENDLLTEDEPTFTAKVSTPGTYTYYCTPHKSANMVGTIIVK 131
           +   D+  +    F A  S PG YTYYC PH+ A MVG IIVK
Sbjct: 77  LSHKDMAFKAGEAFEATFSEPGEYTYYCAPHRGAGMVGKIIVK 119


>tr|B4C3N8|B4C3N8_9CHRO Plastocyanin OS=Cyanothece sp. PCC 8802
           GN=Cyan8802DRAFT_3655 PE=3 SV=1
          Length = 119

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 21/43 (48%), Positives = 25/43 (58%)
 Frame = +3

Query: 3   MDENDLLTEDEPTFTAKVSTPGTYTYYCTPHKSANMVGTIIVK 131
           +   D+  +    F A  S PG YTYYC PH+ A MVG IIVK
Sbjct: 77  LSHKDMAFKAGEAFEATFSEPGEYTYYCAPHRGAGMVGKIIVK 119


>tr|B7KAE8|B7KAE8_9CHRO Plastocyanin OS=Cyanothece sp. PCC 7424
           GN=PCC7424_4559 PE=3 SV=1
          Length = 127

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 19/31 (61%), Positives = 22/31 (70%)
 Frame = +3

Query: 39  TFTAKVSTPGTYTYYCTPHKSANMVGTIIVK 131
           +FT     PGTYTYYC PH+ A MVGTI V+
Sbjct: 97  SFTTTFDEPGTYTYYCEPHRGAGMVGTITVE 127


>tr|B4B8S2|B4B8S2_9CHRO Plastocyanin OS=Cyanothece sp. PCC 7822
           GN=Cyan7822DRAFT_5017 PE=3 SV=1
          Length = 127

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 19/31 (61%), Positives = 22/31 (70%)
 Frame = +3

Query: 39  TFTAKVSTPGTYTYYCTPHKSANMVGTIIVK 131
           +FT     PGTYTYYC PH+ A MVGTI V+
Sbjct: 97  SFTTTFDQPGTYTYYCEPHRGAGMVGTITVE 127


>tr|B0JHN7|B0JHN7_MICAN Plastocyanin OS=Microcystis aeruginosa
           (strain NIES-843) GN=petE PE=4 SV=1
          Length = 125

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = +3

Query: 39  TFTAKVSTPGTYTYYCTPHKSANMVGTIIVK 131
           +F +  S PGTYTYYC PH+ A MVGTI V+
Sbjct: 95  SFESTFSEPGTYTYYCEPHRGAGMVGTITVQ 125


>tr|A8YB36|A8YB36_MICAE Genome sequencing data, contig C266
           OS=Microcystis aeruginosa PCC 7806 GN=IPF_5038 PE=4 SV=1
          Length = 125

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = +3

Query: 39  TFTAKVSTPGTYTYYCTPHKSANMVGTIIVK 131
           +F +  S PGTYTYYC PH+ A MVGTI V+
Sbjct: 95  SFESTFSEPGTYTYYCEPHRGAGMVGTITVQ 125


>tr|A7D2K9|A7D2K9_9EURY Shikimate kinase OS=Halorubrum lacusprofundi
           ATCC 49239 GN=HlacDRAFT_1375 PE=3 SV=1
          Length = 232

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 26/74 (35%), Positives = 39/74 (52%)
 Frame = +3

Query: 9   ENDLLTEDEPTFTAKVSTPGTYTYYCTPHKSANMVGTIIVK*IT*PTSYTNPPLLCSVDE 188
           ++ LL+E   TF     T G Y YYCTPH++  M+G+IIV     P ++  P L     +
Sbjct: 152 DSSLLSEAGATFEHTFETEGVYHYYCTPHETVGMIGSIIV---GEPDAHGQPALEEPPQD 208

Query: 189 PPIVLLRPYIELNS 230
            P  + +   ELN+
Sbjct: 209 KPESVTKKISELNT 222


>tr|Q1EMM9|Q1EMM9_PLAMJ Plastocyanine (Fragment) OS=Plantago major
           GN=pc1 PE=2 SV=1
          Length = 191

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +3

Query: 3   MDENDLLTEDEPTFTAKVSTPGTYTYYCTPHKSANMVGTIIVK 131
           M E D L   +  ++  ++  GTYT+YC PH+ A MVG + VK
Sbjct: 149 MSEEDYLNAKDEVYSVTLTEKGTYTFYCAPHQGAGMVGKVTVK 191