DK947523
Clone id YMU02A01NGRL0016_C20
Library
Length 312
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_C20. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GACAATCCTGACGATCCTAATGAGGTTGCCAATGCAGAGGAGGCCCATTCCAAGATGCTG
GAATGGTTTGGCAAATTTTTGCAATAAAGGGAAATCATATATTTTACTCTGTGACCTAAA
CTCTTGGTGGTAATTTAACTATTTATGACCACTGGCATTTAGCTGGTGTGGACGGTAATA
TTTACCGGTATTATTAAGATATTATCATTGAAATTCTGGATTGAAATTGAGTCAATGTCT
AAGTGAGGTTGGAACATTGGAGCGAAATAAGAGGTTTCGAAGTCATATATTCTTGTGCTT
GAACAAAAAAAA
■■Homology search results ■■ -
sp_hit_id O74504
Definition sp|O74504|YJD1_SCHPO UPF0590 protein C594.01 OS=Schizosaccharomyces pombe
Align length 47
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947523|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_C20, 5'
(312 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O74504|YJD1_SCHPO UPF0590 protein C594.01 OS=Schizosaccharomy... 30 3.7
sp|Q8DWM9|TILS_STRMU tRNA(Ile)-lysidine synthase OS=Streptococcu... 29 6.4

>sp|O74504|YJD1_SCHPO UPF0590 protein C594.01 OS=Schizosaccharomyces
pombe GN=SPCC594.01 PE=1 SV=2
Length = 791

Score = 30.0 bits (66), Expect = 3.7
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -2

Query: 308 FCSSTRIYDFETSYFAPMFQPHLDIDSISIQNFNDNILIIPVNITVH 168
FC YD + Y F PH+D ++ FN NI I +N+ H
Sbjct: 698 FCRENFFYDKDVVYCMSFFSPHMDFNT-----FNLNIGPIRLNVYKH 739


>sp|Q8DWM9|TILS_STRMU tRNA(Ile)-lysidine synthase OS=Streptococcus
mutans GN=tilS PE=3 SV=1
Length = 423

Score = 29.3 bits (64), Expect = 6.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1

Query: 126 QEFRSQSKIYDFPLLQKFAKPFQHLGMGLLCIGNLIRIVR 7
Q FRSQS+ + LLQ + + F +L + NL+ I+R
Sbjct: 234 QIFRSQSEAIQYFLLQNYLRKFPNLEVSKAQFDNLLHILR 273


tr_hit_id Q2GTQ2
Definition tr|Q2GTQ2|Q2GTQ2_CHAGB Putative uncharacterized protein OS=Chaetomium globosum
Align length 42
Score (bit) 36.6
E-value 0.64
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947523|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_C20, 5'
(312 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2GTQ2|Q2GTQ2_CHAGB Putative uncharacterized protein OS=Chaet... 37 0.64
tr|B8LMG7|B8LMG7_PICSI Putative uncharacterized protein OS=Picea... 36 0.84
tr|A9NTX6|A9NTX6_PICSI Putative uncharacterized protein OS=Picea... 36 0.84
tr|A9NNK5|A9NNK5_PICSI Putative uncharacterized protein OS=Picea... 36 0.84
tr|A4RI82|A4RI82_MAGGR Putative uncharacterized protein OS=Magna... 35 1.4
tr|Q9P5J2|Q9P5J2_NEUCR Putative uncharacterized protein B23L21.3... 35 1.9
tr|Q1K5Z0|Q1K5Z0_NEUCR Predicted protein OS=Neurospora crassa GN... 35 1.9
tr|B2AE29|B2AE29_PODAN Predicted CDS Pa_4_2640 OS=Podospora anse... 34 4.2
tr|Q9LUG8|Q9LUG8_ARATH Similarity to endo-1 (AT3g23600/MDB19_9) ... 33 5.5
tr|Q2V3T4|Q2V3T4_ARATH Uncharacterized protein At3g23600.2 OS=Ar... 33 5.5
tr|A9NTV6|A9NTV6_PICSI Putative uncharacterized protein OS=Picea... 33 7.1

>tr|Q2GTQ2|Q2GTQ2_CHAGB Putative uncharacterized protein
OS=Chaetomium globosum GN=CHGG_08652 PE=4 SV=1
Length = 382

Score = 36.6 bits (83), Expect = 0.64
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -1

Query: 177 YRPHQLNASGHK*LNYHQEFRSQSKI--YDFPLLQKFAKPFQ 58
+ + A GH L H+EFR +++ ++ PLL K AKPFQ
Sbjct: 149 FEEDDIMAMGHAKLEEHREFREYARVAVWEMPLLSKLAKPFQ 190


>tr|B8LMG7|B8LMG7_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 242

Score = 36.2 bits (82), Expect = 0.84
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +1

Query: 4 NPDDPNEVANAEEAHSKMLEWFGKFL 81
N +D V NAEEAH KMLEW K+L
Sbjct: 216 NENDEVAVRNAEEAHVKMLEWLNKYL 241


>tr|A9NTX6|A9NTX6_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 242

Score = 36.2 bits (82), Expect = 0.84
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +1

Query: 4 NPDDPNEVANAEEAHSKMLEWFGKFL 81
N +D V NAEEAH KMLEW K+L
Sbjct: 216 NENDEVAVKNAEEAHVKMLEWLNKYL 241


>tr|A9NNK5|A9NNK5_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 242

Score = 36.2 bits (82), Expect = 0.84
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +1

Query: 4 NPDDPNEVANAEEAHSKMLEWFGKFL 81
N +D V NAEEAH KMLEW K+L
Sbjct: 216 NENDEVAVKNAEEAHVKMLEWLNKYL 241


>tr|A4RI82|A4RI82_MAGGR Putative uncharacterized protein
OS=Magnaporthe grisea GN=MGG_07271 PE=4 SV=1
Length = 388

Score = 35.4 bits (80), Expect = 1.4
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -1

Query: 156 ASGHK*LNYHQEFRSQSK--IYDFPLLQKFAKPFQ 58
+ H L H+E R ++ IYD PLL KFAKPF+
Sbjct: 162 SGAHGKLEEHREMREYARLAIYDMPLLSKFAKPFE 196


>tr|Q9P5J2|Q9P5J2_NEUCR Putative uncharacterized protein B23L21.370
OS=Neurospora crassa GN=B23L21.370 PE=4 SV=1
Length = 382

Score = 35.0 bits (79), Expect = 1.9
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = -1

Query: 177 YRPHQLNASGHK*LNYHQEFRSQSKI--YDFPLLQKFAKPF 61
+ + + + GH L H+EFR ++I ++ PLL K+AKPF
Sbjct: 147 FHENDIMSLGHGKLEEHREFREYARIAVWEMPLLSKYAKPF 187


>tr|Q1K5Z0|Q1K5Z0_NEUCR Predicted protein OS=Neurospora crassa
GN=NCU03926 PE=4 SV=1
Length = 404

Score = 35.0 bits (79), Expect = 1.9
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = -1

Query: 177 YRPHQLNASGHK*LNYHQEFRSQSKI--YDFPLLQKFAKPF 61
+ + + + GH L H+EFR ++I ++ PLL K+AKPF
Sbjct: 147 FHENDIMSLGHGKLEEHREFREYARIAVWEMPLLSKYAKPF 187


>tr|B2AE29|B2AE29_PODAN Predicted CDS Pa_4_2640 OS=Podospora
anserina PE=4 SV=1
Length = 373

Score = 33.9 bits (76), Expect = 4.2
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -1

Query: 177 YRPHQLNASGHK*LNYHQEFRSQSKI--YDFPLLQKFAKPF 61
+ + + A GH L H+E+R ++I ++ PLL KFAK F
Sbjct: 153 FEENDMMAMGHAKLEEHREYREYARIAVWEMPLLSKFAKKF 193


>tr|Q9LUG8|Q9LUG8_ARATH Similarity to endo-1 (AT3g23600/MDB19_9)
(Contains similarity to endo-1,3-1,4-beta-D-glucanase)
OS=Arabidopsis thaliana GN=At3g23600 PE=2 SV=1
Length = 239

Score = 33.5 bits (75), Expect = 5.5
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1

Query: 4 NPDDPNEVANAEEAHSKMLEWFGKFLQ 84
N D+P V AEEAH +ML+WF +++
Sbjct: 213 NIDEPEAVKAAEEAHKEMLDWFVTYIK 239


>tr|Q2V3T4|Q2V3T4_ARATH Uncharacterized protein At3g23600.2
OS=Arabidopsis thaliana GN=At3g23600 PE=4 SV=1
Length = 236

Score = 33.5 bits (75), Expect = 5.5
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1

Query: 4 NPDDPNEVANAEEAHSKMLEWFGKFLQ 84
N D+P V AEEAH +ML+WF +++
Sbjct: 210 NIDEPEAVKAAEEAHKEMLDWFVTYIK 236