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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947525
Clone id YMU02A01NGRL0016_C22
Library
Length 337
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_C22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GTCAAAAGAAAAGGAAATCCTTGGGAAATTTAATATTCCCTAGTACCAATCCGTAAAAAT
GGAATGTAAATCCTGGGATTGTTGACTACTAAGAGTCTCTCTTATCATTCTATGGAGTTT
CCATAGATAGGTAAGGTCGTAAGTCCCACCTTTTCTATTTTCCCCTCTCCAAACCAAGGG
TGGGGCGGCAAAGAAGATATTGGGTCTCGCCCCAATGCGGTACTCAAAGAATAGTCTTAC
GGGATAGAGAAGAAGGAGGGGTAGGAAGTGGCGGCTTAGACTGATACACGGACGTGATTC
GTCTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6C8W4
Definition sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containing protein YALI0D16379g OS=Yarrowia lipolytica
Align length 38
Score (bit) 30.0
E-value 3.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947525|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_C22, 5'
         (307 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containin...    30   3.8  

>sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containing
           protein YALI0D16379g OS=Yarrowia lipolytica
           GN=YALI0D16379g PE=3 SV=1
          Length = 818

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -2

Query: 171 WRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSI 58
           WR EN K G YD   + KL +M+R+     Q++DL +I
Sbjct: 292 WR-ENPKFGYYDHVTISKLTKMVRKLRLQDQAEDLSNI 328
tr_hit_id A1CQJ5
Definition tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein OS=Aspergillus clavatus
Align length 70
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947525|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_C22, 5'
         (307 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein OS=Asper...    35   1.4  

>tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein
           OS=Aspergillus clavatus GN=ACLA_026330 PE=4 SV=1
          Length = 577

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = -2

Query: 213 GARPNIFFAAPPLVWRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSIFTDWY*GI 34
           G+RP + FA  P+  +G N  G  Y L Y W+L   +  + +     D+  I+  W  G+
Sbjct: 168 GSRPQLLFAVLPIADKGANFSGKHYVLCYDWRLRTFLARSFNWLPG-DIRDIWAVWSEGL 226

Query: 33  ----LNFPRI 16
               +  PR+
Sbjct: 227 TVYTITIPRL 236