DK947550
Clone id YMU02A01NGRL0016_E04
Library
Length 502
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_E04. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GTATCGTAGCGGGTATAGTTTAGTGGTAAAAGTGTGACTCGTCTCGCAGTGATTTTGATA
GTTGAGGGATCGTATCTCGGCTAAATTAACTGAAAGAAAAAACTTTATCTTCGCAGAAAA
TATGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGATTAATCAATCTCGTCACTCAT
TCATTTCAAGAACTAGGGAAGATAGTGACGAAGCAGAATTGTTTTGGTACCCCAAGAAAT
ACTTGGTTTAATTTCTACTTCCGGGGAGATAAATAAAGAAAAAAAAATCTATGGGTAGAC
GTCCAAGATAGCTGACTCATCGTCACTAAACCTCAGAGAATAAATCTGGGAAAGAAAGTT
GGAATAAATAAATCCGGGTTTGTCAAGATTATTGAACATCTATTTGGTTGAACGGGATCC
CTCGTTTCAACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTTTCCTGATAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947550|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_E04, 5'
(472 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A6D2J9
Definition tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1
Align length 50
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947550|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_E04, 5'
(472 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri... 35 1.9
tr|A8WQV5|A8WQV5_CAEBR CBR-CYP-31A3 protein OS=Caenorhabditis br... 33 7.1
tr|Q9N574|Q9N574_CAEEL Cytochrome p450 family protein 31A3 OS=Ca... 33 9.3

>tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio
shilonii AK1 GN=VSAK1_01567 PE=4 SV=1
Length = 319

Score = 35.0 bits (79), Expect = 1.9
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = -2

Query: 189 LK*MSDEID*STSNFGEIIRKHIFSAKIKFFLSVNLAEIRSLNYQNHCET 40
LK +++E+D ST + ++++F A +F+L VNL + R++ Q C +
Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKCSS 283


>tr|A8WQV5|A8WQV5_CAEBR CBR-CYP-31A3 protein OS=Caenorhabditis
briggsae GN=Cbr-cyp-31A3 PE=3 SV=1
Length = 495

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2

Query: 368 INPGLSRLLNIYLVERDPSFQQLGEIYFPKGFFPD 472
I G++ LLN+YLV RDP+ + E++ P F P+
Sbjct: 382 IPKGVTLLLNLYLVHRDPAQWKDPEVFDPDRFLPE 416


>tr|Q9N574|Q9N574_CAEEL Cytochrome p450 family protein 31A3
OS=Caenorhabditis elegans GN=cyp-31A3 PE=2 SV=2
Length = 495

Score = 32.7 bits (73), Expect = 9.3
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2

Query: 368 INPGLSRLLNIYLVERDPSFQQLGEIYFPKGFFPD 472
I G++ LLN+YLV RDPS + +++ P F P+
Sbjct: 382 IPKGVTFLLNLYLVHRDPSQWKDPDVFDPDRFLPE 416