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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947557
Clone id YMU02A01NGRL0016_E13
Library
Length 523
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_E13. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
CTCTTATTTTTGCTCCACTAGAGTGTTATCCTATCCACCTTCTCTCTCGTCTACTCTCCT
CTGCGCGCCATGTCCATTTGCGAGGCCATTGGCTTCTGCTGGCGCACCCTACAGGTGGTA
TCAGAGCACCAGGAAGAGAAACAATTCAAAAGTCTTGGCTCTTCCACACCTCGCTTTGAC
AATGAGAAGGATGGAGAGGAGGGCAGTGTGAGCAATTGATGGGAAGTGGCGACGTTCAGG
TAGTTTTGAGAGAACGATTGAGGAAGGATTCTAACAGTGAATGCGATCAAGGGTGTGTCG
AGCAGGCGGAGATGAGGAGATTGGGTCGGAGCAGGACTACGCCAAAGATGGCGAATTGGA
GGCAAGGGACTCAGGCCCGGAGCCGGTTGTGACAGAGAGGCCGGAAGCACGTTGTTAGGC
TAAGGGCGGTTGAGGAACAGGTCAGCGCTAGAGCGAATGGTGTAACTGGGAATAAGTGCG
GACCAGCAGGCTCTGCCATGCTACACACACAGTGATGTCATCC
■■Homology search results ■■ -
sp_hit_id Q494R0
Definition sp|Q494R0|YP028_HUMAN Uncharacterized protein LOC283932 OS=Homo sapiens
Align length 84
Score (bit) 32.7
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947557|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_E13, 5'
         (523 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q494R0|YP028_HUMAN Uncharacterized protein LOC283932 OS=Homo ...    33   1.1  
sp|P41677|LEF7_NPVAC Late expression factor 7 OS=Autographa cali...    32   1.4  
sp|Q9YLR1|POLN_HEVUS Non-structural polyprotein pORF1 OS=Hepatit...    32   1.8  
sp|Q8N8W4|PLPL1_HUMAN Patatin-like phospholipase domain-containi...    32   2.4  
sp|O60318|MCM3A_HUMAN 80 kDa MCM3-associated protein OS=Homo sap...    32   2.4  
sp|Q6CBW0|NST1_YARLI Stress response protein NST1 OS=Yarrowia li...    31   4.0  
sp|Q9UPN6|RBM16_HUMAN Putative RNA-binding protein 16 OS=Homo sa...    30   5.3  
sp|O14559|TCGAP_HUMAN TC10/CDC42 GTPase-activating protein OS=Ho...    30   6.9  
sp|Q9Y463|DYR1B_HUMAN Dual specificity tyrosine-phosphorylation-...    30   6.9  
sp|Q6K8S0|CCF22_ORYSJ Cyclin-F2-2 OS=Oryza sativa subsp. japonic...    30   6.9  
sp|Q80YR4|ZN598_MOUSE Zinc finger protein 598 OS=Mus musculus GN...    30   9.0  
sp|Q02858|TIE2_MOUSE Angiopoietin-1 receptor OS=Mus musculus GN=...    30   9.0  
sp|A7MQM1|METE_ENTS8 5-methyltetrahydropteroyltriglutamate--homo...    30   9.0  

>sp|Q494R0|YP028_HUMAN Uncharacterized protein LOC283932 OS=Homo
           sapiens PE=2 SV=1
          Length = 122

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
 Frame = +3

Query: 108 PTGGIRAPGRETIQKSWLFHTSL*Q*EGWRGGQCEQLMGSGDVQVVLRERLRKDSNSECD 287
           PT G R  G  ++    ++H    Q   W+G      MG G      R+R R     +CD
Sbjct: 40  PTSGARPDGSCSLPAP-VYHLKSRQ---WKG------MGRG-----YRQRWRLQGRGDCD 84

Query: 288 QGCVEQAE--MRRLGRSRTTPKMA 353
            GCV QA        R RTT KMA
Sbjct: 85  MGCVVQASGLFPAEMRERTTKKMA 108


>sp|P41677|LEF7_NPVAC Late expression factor 7 OS=Autographa
           californica nuclear polyhedrosis virus GN=LEF-7 PE=4
           SV=1
          Length = 226

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 22/81 (27%), Positives = 38/81 (46%)
 Frame = -3

Query: 476 LIPSYTIRSSADLFLNRP*PNNVLPASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLD 297
           L+P  +   ++ +F N+  P +V   +L+ P P L      + LW   A     H R +D
Sbjct: 86  LVPLLSFGKASCVFFNKCIPEDVRIVTLNWPLPLLENFLSKQFLWYKLARKLIEHERRMD 145

Query: 296 TPLIAFTVRILPQSFSQNYLN 234
             +   TV+I     +++YLN
Sbjct: 146 RCVTPSTVQINLYDDNEDYLN 166


>sp|Q9YLR1|POLN_HEVUS Non-structural polyprotein pORF1 OS=Hepatitis
           E virus genotype 3 (isolate Human/United States of
           America/US2) GN=ORF1 PE=3 SV=1
          Length = 1708

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -3

Query: 419 PNNVLPASLSQPAPGLS-PLPPIRHLWRSPAPTQSPHLRLLDTPLI 285
           P    PAS +  APGL  P PP+  +W  P P++  H+     P +
Sbjct: 717 PEAAAPASAA--APGLPYPTPPVSDIWVLPPPSEESHVDAASVPSV 760


>sp|Q8N8W4|PLPL1_HUMAN Patatin-like phospholipase domain-containing
           protein 1 OS=Homo sapiens GN=PNPLA1 PE=2 SV=2
          Length = 532

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -3

Query: 419 PNNVLPASLSQPAPGLSPLPPIRHLWRSPAPTQSPH 312
           P++   +SL  P PGLSPL P + +  S +P +S H
Sbjct: 381 PSSTPGSSLPTPPPGLSPLSPQQQVQPSGSPARSLH 416


>sp|O60318|MCM3A_HUMAN 80 kDa MCM3-associated protein OS=Homo sapiens
            GN=MCM3AP PE=1 SV=2
          Length = 1980

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = -3

Query: 419  PNNVLPASLSQPAPGLSPLPPIRHLWRSPAPT 324
            P + LP SL  PAP   PLPP+  L  S AP+
Sbjct: 1025 PLSSLPQSLPAPAPSPVPLPPVLALTPSVAPS 1056


>sp|Q6CBW0|NST1_YARLI Stress response protein NST1 OS=Yarrowia
           lipolytica GN=NST1 PE=3 SV=1
          Length = 889

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 9/58 (15%)
 Frame = -3

Query: 455 RSSADLFLNRP*PNNV-LPAS--------LSQPAPGLSPLPPIRHLWRSPAPTQSPHL 309
           R+S  + L++P P    +PAS        L QP P  +P+ P+  + +SP+P   P L
Sbjct: 576 RASMSIPLSKPLPGKTQIPASQPGTSLGGLQQPVPQAAPVAPVAMMPQSPSPQLPPGL 633


>sp|Q9UPN6|RBM16_HUMAN Putative RNA-binding protein 16 OS=Homo
           sapiens GN=RBM16 PE=1 SV=1
          Length = 1271

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -3

Query: 404 PASLSQPAPGLSPLPPIRHLWRSPAPTQSP 315
           P S+  P PG SP+PP   L  S  P+Q P
Sbjct: 660 PVSMPVPPPGFSPIPPPPFLRASFNPSQPP 689


>sp|O14559|TCGAP_HUMAN TC10/CDC42 GTPase-activating protein OS=Homo
            sapiens GN=SNX26 PE=1 SV=2
          Length = 1287

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 16/33 (48%), Positives = 16/33 (48%)
 Frame = -3

Query: 425  P*PNNVLPASLSQPAPGLSPLPPIRHLWRSPAP 327
            P P   LP  L  P PGL PL P      SPAP
Sbjct: 1035 PAPRECLPPFLGVPKPGLYPLGPPSFQPSSPAP 1067


>sp|Q9Y463|DYR1B_HUMAN Dual specificity
           tyrosine-phosphorylation-regulated kinase 1B OS=Homo
           sapiens GN=DYRK1B PE=1 SV=1
          Length = 629

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 404 PASLSQ-PAPGLSPLPPIRHLWRSPAPTQSPHLRLLDTPLI 285
           PAS S  P  G    P  R+L R P+PT  P   L+D  L+
Sbjct: 529 PASASSLPGTGAQLPPQPRYLGRPPSPTSPPPPELMDVSLV 569


>sp|Q6K8S0|CCF22_ORYSJ Cyclin-F2-2 OS=Oryza sativa subsp. japonica
           GN=CYCF2-2 PE=2 SV=1
          Length = 446

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 12/61 (19%)
 Frame = -3

Query: 407 LPASLSQPAPGLSPLP------------PIRHLWRSPAPTQSPHLRLLDTPLIAFTVRIL 264
           +P +L  P PG  PLP            P RHL   P     P   L D P+ A   R L
Sbjct: 90  VPCALLPPPPGFPPLPVPGLADEPVYAAPARHLPPPPGFPPLPVPGLADEPVYAAPARRL 149

Query: 263 P 261
           P
Sbjct: 150 P 150
tr_hit_id A8IZR0
Definition tr|A8IZR0|A8IZR0_CHLRE Predicted protein OS=Chlamydomonas reinhardtii
Align length 48
Score (bit) 36.6
E-value 0.77
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947557|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_E13, 5'
         (523 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8IZR0|A8IZR0_CHLRE Predicted protein OS=Chlamydomonas reinha...    37   0.77 
tr|Q5KHI0|Q5KHI0_CRYNE Putative uncharacterized protein OS=Crypt...    36   1.00 
tr|A9S9Z6|A9S9Z6_PHYPA Predicted protein OS=Physcomitrella paten...    36   1.3  
tr|B0L5P4|B0L5P4_CALMS COUP-TF/Svp nuclear hormone receptor OS=C...    36   1.3  
tr|B5LVY9|B5LVY9_SACKO Runt protein OS=Saccoglossus kowalevskii ...    35   1.7  
tr|Q0JKB9|Q0JKB9_ORYSJ Os01g0685200 protein OS=Oryza sativa subs...    35   2.9  
tr|Q5B8M8|Q5B8M8_EMENI Putative uncharacterized protein OS=Emeri...    35   2.9  
tr|A7CYE1|A7CYE1_9BACT Putative uncharacterized protein OS=Opitu...    34   3.8  
tr|Q1JT09|Q1JT09_TOXGO Putative uncharacterized protein OS=Toxop...    34   3.8  
tr|B6KQI8|B6KQI8_TOXGO Putative uncharacterized protein OS=Toxop...    34   3.8  
tr|A8I172|A8I172_CHLRE Predicted protein OS=Chlamydomonas reinha...    34   5.0  
tr|Q2URR9|Q2URR9_ASPOR Sensory transduction histidine kinase OS=...    34   5.0  
tr|B8MY27|B8MY27_ASPFL Sensor histidine kinase/response regulato...    34   5.0  
tr|B2ALF2|B2ALF2_PODAN Predicted CDS Pa_5_3200 OS=Podospora anse...    34   5.0  
tr|B5ZXW4|B5ZXW4_RHILW Putative uncharacterized protein OS=Rhizo...    33   6.5  
tr|Q2LZV0|Q2LZV0_DROPS GA16935 OS=Drosophila pseudoobscura pseud...    33   6.5  
tr|B0XFU5|B0XFU5_CULQU Mediator complex subunit rgr-1 OS=Culex q...    33   6.5  
tr|B8PIK1|B8PIK1_9APHY Predicted protein OS=Postia placenta Mad-...    33   6.5  
tr|Q8B9D7|Q8B9D7_NPVRO Late expression factor-7 OS=Rachiplusia o...    33   8.5  
tr|Q0GYA0|Q0GYA0_9ABAC Late expression factor-7 OS=Plutella xylo...    33   8.5  
tr|Q1DQ92|Q1DQ92_COCIM Putative uncharacterized protein OS=Cocci...    33   8.5  
tr|B6LFG6|B6LFG6_BRAFL Putative uncharacterized protein OS=Branc...    33   8.6  

>tr|A8IZR0|A8IZR0_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_173556 PE=4 SV=1
          Length = 1555

 Score = 36.6 bits (83), Expect = 0.77
 Identities = 20/48 (41%), Positives = 25/48 (52%)
 Frame = -3

Query: 425 P*PNNVLPASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDTPLIA 282
           P P  V P SL +PAP  SP P       +PAPT +P L   + P +A
Sbjct: 239 PQPQAVAPPSLEEPAPSPSPAP-------TPAPTPAPPLEPANAPALA 279


>tr|Q5KHI0|Q5KHI0_CRYNE Putative uncharacterized protein
           OS=Cryptococcus neoformans GN=CNBD0030 PE=4 SV=1
          Length = 218

 Score = 36.2 bits (82), Expect = 1.00
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = -3

Query: 473 IPSYTIRSSADLFLNRP*PNNVLPASLSQPAPGLSPLPPIRHLWRSPA-PTQSPHLRLLD 297
           +PS+T    +   L  P P  +LP  L   +P LSPLPP  H    PA    SP  R+  
Sbjct: 21  LPSFTRLPESSTVLPHPCPA-LLPPILLSLSPPLSPLPPAPHSRPFPAFQGYSPRRRVFP 79

Query: 296 TPLIAFTVRILPQSFSQNYLNVATSHQ 216
             ++    R  PQS  +   ++A ++Q
Sbjct: 80  PTVLPLYPRSFPQSPEEPDHHLAATNQ 106


>tr|A9S9Z6|A9S9Z6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_163695 PE=4 SV=1
          Length = 824

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
 Frame = -3

Query: 404 PASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDTP-LIAFTVRILPQS------FSQ 246
           P +L++P       P   H  RSP P  SP  R LD P  I+F  R+ P S      FS 
Sbjct: 510 PTNLNRPLTSTRAAPDTHHQSRSPLPPPSPQTRPLDLPRAISFNSRLHPGSGGHVSNFSL 569

Query: 245 NYLNVATS 222
           +  N A S
Sbjct: 570 DSKNAARS 577


>tr|B0L5P4|B0L5P4_CALMS COUP-TF/Svp nuclear hormone receptor
           OS=Callosobruchus maculatus GN=Svp PE=2 SV=1
          Length = 419

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 25/66 (37%), Positives = 33/66 (50%)
 Frame = -3

Query: 413 NVLPASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDTPLIAFTVRILPQSFSQNYLN 234
           N +P SL+    GL+PLPP  +L  +P PT    +  L+TP I    R  P   SQN  N
Sbjct: 15  NPIPTSLNSLPNGLNPLPPAGNL--NPLPTNINPI-TLETPDIGLINRQTPSQNSQNSAN 71

Query: 233 VATSHQ 216
               +Q
Sbjct: 72  SNDKNQ 77


>tr|B5LVY9|B5LVY9_SACKO Runt protein OS=Saccoglossus kowalevskii
           GN=runt PE=2 SV=1
          Length = 490

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
 Frame = -3

Query: 482 SALIPSYTIRSSADLFLNRP*PNNVLPASLSQP-----APGLSPLPPIR---HLWRSPAP 327
           SA IP  +       +L  P P++V P S S P     +P +S  PP +   HL+ +PAP
Sbjct: 350 SATIPILSPGIDTSRYLPLPSPHDVYPTSPSTPVTLPASPYISGSPPYQLYAHLYSTPAP 409

Query: 326 TQ-------SPHLRLLDTPLIAFTVRILPQSFSQ 246
                    +PHL +L T  ++  +  +    SQ
Sbjct: 410 ASHPPYYEGTPHLSMLPTTTVSSRISTMIGRSSQ 443


>tr|Q0JKB9|Q0JKB9_ORYSJ Os01g0685200 protein OS=Oryza sativa subsp.
           japonica GN=Os01g0685200 PE=4 SV=1
          Length = 479

 Score = 34.7 bits (78), Expect = 2.9
 Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
 Frame = -3

Query: 497 GRACWSALIPSYTIRSSADLFL------NRP*PNNVLPASLSQPAPGLSPLPPIRHLW 342
           GRA WS   P   IRS A L L      +   P    P   + P P   P PP+R LW
Sbjct: 31  GRAAWSRRRPPLPIRSRARLPLPPLSPADAASPQPCSPTDAAAPPPRSLPTPPLRLLW 88


>tr|Q5B8M8|Q5B8M8_EMENI Putative uncharacterized protein
           OS=Emericella nidulans GN=AN3102.2 PE=4 SV=1
          Length = 2312

 Score = 34.7 bits (78), Expect = 2.9
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -3

Query: 464 YTIRSSADLFLNRP*PNNVLPASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDT 294
           + +R +AD   + P   +  P+S+++ +P     PP RH WRS     S  L L  T
Sbjct: 83  FGLRHAADTDASTPLATSSGPSSITRSSPRTDARPPFRHHWRSSLSESSSELSLSRT 139


>tr|A7CYE1|A7CYE1_9BACT Putative uncharacterized protein
           OS=Opitutaceae bacterium TAV2 GN=ObacDRAFT_2735 PE=3
           SV=1
          Length = 280

 Score = 34.3 bits (77), Expect = 3.8
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 404 PASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDTPLIAFTVRILP 261
           PA   +PAP    LPP+ H  R+P P     ++ L +PL+   + ++P
Sbjct: 41  PARSERPAP--PALPPVPHAIRAPGPPSHKIMKTLRSPLVVVLLGVVP 86


>tr|Q1JT09|Q1JT09_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii RH GN=TgIa.2130 PE=3 SV=1
          Length = 2213

 Score = 34.3 bits (77), Expect = 3.8
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -3

Query: 419 PNNVLPASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDTPLIA 282
           P++  P  L+ PAPGL P PP   L   P  +  P L  L  P +A
Sbjct: 76  PSSFQPPPLATPAPGLGPRPPGVVLHGGPPESARPALSFLPPPRLA 121


>tr|B6KQI8|B6KQI8_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_092990 PE=4 SV=1
          Length = 2346

 Score = 34.3 bits (77), Expect = 3.8
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -3

Query: 419 PNNVLPASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDTPLIA 282
           P++  P  L+ PAPGL P PP   L   P  +  P L  L  P +A
Sbjct: 57  PSSFQPPPLATPAPGLGPRPPGVVLHGGPPESARPALSFLPPPRLA 102