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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947559
Clone id YMU02A01NGRL0016_E15
Library
Length 441
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_E15. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GATTCGTGGACGGGGTATATACATCCCACTGGAGCTCATCGCTTCTCCAGAGCTCCAGAT
TAGCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCATCTCTAATGGGAG
CCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTC
CTACTTGCCGCCTTTGTCAAGTGAGCAGATCGCGAAGCAGGTGGACTTCATGGTCCGAAA
AGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCA
CGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTG
CCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGC
CTTCATCCGCGTGCTGGGCTT
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 116
Score (bit) 166.0
E-value 5.0e-41
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947559|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_E15, 5'
         (441 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   166   5e-41
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   162   6e-40
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   161   1e-39
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   160   2e-39
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   160   3e-39
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   159   4e-39
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   159   4e-39
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   159   4e-39
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   159   5e-39
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   159   6e-39
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   158   8e-39
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   158   8e-39
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   158   8e-39
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   158   8e-39
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   158   1e-38
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   158   1e-38
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   158   1e-38
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   158   1e-38
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   158   1e-38
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   157   1e-38
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   157   2e-38
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   157   2e-38
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   157   2e-38
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   157   2e-38
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   156   4e-38
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   155   5e-38
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   155   5e-38
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai...   155   9e-38
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   155   9e-38
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   155   9e-38

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  166 bits (419), Expect = 5e-41
 Identities = 72/116 (62%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
 Frame = +2

Query: 95  FSMAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-K 271
           FS   SNG RV  M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ +
Sbjct: 45  FSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELE 104

Query: 272 IGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
            G VYREH H  GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+G
Sbjct: 105 HGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIG 160


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  162 bits (410), Expect = 6e-40
 Identities = 70/118 (59%), Positives = 89/118 (75%)
 Frame = +2

Query: 86  YAVFSMAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEF 265
           +A  S   SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD+++R GW PCIEF
Sbjct: 41  FADSSKLPSNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEF 100

Query: 266 DKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
            K+G VYRE+ +  GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++G
Sbjct: 101 CKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIG 158


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  161 bits (407), Expect = 1e-39
 Identities = 71/116 (61%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
 Frame = +2

Query: 95  FSMAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-K 271
           FS   SNG RV  M VW P   KK+ETLSYLPPL+  Q+AK+VD+++RK W PC+EF+ +
Sbjct: 43  FSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELE 102

Query: 272 IGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
            G VYRE+    GYYDGRYW MWKLPMFGC D+A V++E+AEC KEYP+A+IR++G
Sbjct: 103 HGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRIIG 158


>sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain
           PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2
          Length = 174

 Score =  160 bits (405), Expect = 2e-39
 Identities = 68/112 (60%), Positives = 85/112 (75%)
 Frame = +2

Query: 104 AISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 283
           ++SNG R+  M VW     KKFETLSYLPPLS+E ++KQVD+++R  W PC+EF K+G V
Sbjct: 37  SVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFV 96

Query: 284 YREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
           +REH    GYYDGRYW MWKLPMFGC DA  VL E+ E  KEYP+A++RV+G
Sbjct: 97  FREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIG 148


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  160 bits (404), Expect = 3e-39
 Identities = 72/111 (64%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
 Frame = +2

Query: 110 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 286
           SNG RV  M VW P   KKFETLSYLPPLSSEQ+AK+VD+++RK   PC+EF+ + G VY
Sbjct: 52  SNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVY 111

Query: 287 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
           REH    GYYDGRYW MWKLPMFGC D++ VL+E+ EC K YP AFIR++G
Sbjct: 112 REHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIG 162


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  159 bits (403), Expect = 4e-39
 Identities = 68/111 (61%), Positives = 83/111 (74%)
 Frame = +2

Query: 107 ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVY 286
           +SNG R+  M VW  Y NKKFETLSYLPPLS++ + KQVD+++R GW PC+EF K+G VY
Sbjct: 39  VSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFSKVGFVY 98

Query: 287 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
           RE+     YYDGRYW MWKLPMFGC DA  V +E+ E  K YP+AF RV+G
Sbjct: 99  RENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEAIKSYPDAFHRVIG 149


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  159 bits (403), Expect = 4e-39
 Identities = 67/114 (58%), Positives = 85/114 (74%)
 Frame = +2

Query: 98  SMAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIG 277
           S ++SNG R+  M VW     KKFETLSYLPPLS+E + KQVD+++R  W PC+EF K+G
Sbjct: 35  SASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVG 94

Query: 278 SVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
            ++REH    GYYDGRYW MWKLPMFGC DA  VL E+ E  KEYP+A++R++G
Sbjct: 95  FIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIG 148


>sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small chain
           PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1
          Length = 175

 Score =  159 bits (403), Expect = 4e-39
 Identities = 68/112 (60%), Positives = 84/112 (75%)
 Frame = +2

Query: 104 AISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 283
           ++SNG R+  M VW     KKFETLSYLPPLS+E + KQVD+++R  W PC+EF K+G V
Sbjct: 38  SVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFV 97

Query: 284 YREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
           +REH    GYYDGRYW MWKLPMFGC DA  VL E+ E  KEYP+A++RV+G
Sbjct: 98  FREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIG 149


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  159 bits (402), Expect = 5e-39
 Identities = 69/111 (62%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
 Frame = +2

Query: 110 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 286
           SNGSRV+ M VW P   KKFETLSYLPPL+ EQ+ K+V++++RKGW PC+EF+ + G V+
Sbjct: 48  SNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQLLKEVEYLLRKGWVPCVEFELEKGFVH 107

Query: 287 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
           R++    GYYDGRYW MW+LP+FG  DAA VL+E+AEC  EYPEAFIR++G
Sbjct: 108 RQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLKEVAECKAEYPEAFIRIIG 158


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  159 bits (401), Expect = 6e-39
 Identities = 68/111 (61%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
 Frame = +2

Query: 110 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 286
           SNG RV+ M VW P   KKFETLSYLP L+  ++AK+VD+++R  W PC+EF+ + G VY
Sbjct: 48  SNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVY 107

Query: 287 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
           REH +  GYYDGRYW MWKLP+FGC D+A VL+E+ EC KEYP AFIR++G
Sbjct: 108 REHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIG 158
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 113
Score (bit) 223.0
E-value 5.0e-57
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947559|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_E15, 5'
         (441 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   223   5e-57
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   166   5e-40
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   166   7e-40
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   164   3e-39
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   162   6e-39
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   162   1e-38
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   162   1e-38
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   161   2e-38
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   160   3e-38
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q9ZWG5|Q9ZWG5_9POAL Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q9ZNV1|Q9ZNV1_AEGLO Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q9SAX0|Q9SAX0_AEGSE Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q9SAW9|Q9SAW9_AEGTA Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q9SAW8|Q9SAW8_TRITI Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q9SAW5|Q9SAW5_WHEAT Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q9SAW4|Q9SAW4_SECCE Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q9S7N3|Q9S7N3_AEGLO Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q9FRZ2|Q9FRZ2_WHEAT Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q575T3|Q575T3_TRITU Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   159   5e-38
tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t...   159   5e-38
tr|Q9ZWH4|Q9ZWH4_AEGSP Ribulose bisphosphate carboxylase small c...   159   7e-38
tr|Q9ZWH1|Q9ZWH1_AEGSE Ribulose bisphosphate carboxylase small c...   159   7e-38
tr|Q9ZWG8|Q9ZWG8_TRITU Ribulose bisphosphate carboxylase small c...   159   7e-38

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  223 bits (567), Expect = 5e-57
 Identities = 99/113 (87%), Positives = 109/113 (96%)
 Frame = +2

Query: 101 MAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGS 280
           +AISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAKQV++MVRKGWTPCIEFD IGS
Sbjct: 43  LAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGS 102

Query: 281 VYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
           VYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAECAKEYP AFIRVLG
Sbjct: 103 VYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLG 155


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  166 bits (420), Expect = 5e-40
 Identities = 72/116 (62%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
 Frame = +2

Query: 95  FSMAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-K 271
           FS   SNG RV  M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ +
Sbjct: 45  FSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELE 104

Query: 272 IGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
            G VYREH H  GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+G
Sbjct: 105 HGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIG 160


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  166 bits (419), Expect = 7e-40
 Identities = 70/113 (61%), Positives = 87/113 (76%)
 Frame = +2

Query: 98  SMAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIG 277
           S  +SNGS+   M  W P +NKKFE LSYLPPLS + IAK++D+M++KGW PC+EFD++G
Sbjct: 38  SRTVSNGSKTFCMKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVG 97

Query: 278 SVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVL 436
           SV REH    GYYDGRYW +WKLPMFGC D++ VL EI EC K YP+A+IR L
Sbjct: 98  SVRREHSRMPGYYDGRYWTLWKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCL 150


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  164 bits (414), Expect = 3e-39
 Identities = 70/111 (63%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
 Frame = +2

Query: 110 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 286
           SNG RV  M VW P   KKFETLSYLP L+ EQ++K+VD+++R GW PC+EF+ + G VY
Sbjct: 51  SNGGRVQCMKVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVY 110

Query: 287 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
           REH H  GYYDGRYW MWKLPMFGC D++ VL+E+ EC KEYP A+IR++G
Sbjct: 111 REHHHSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIG 161


>tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small
           chain OS=Vitis vinifera GN=GSVIVT00031354001 PE=3 SV=1
          Length = 169

 Score =  162 bits (411), Expect = 6e-39
 Identities = 68/110 (61%), Positives = 86/110 (78%)
 Frame = +2

Query: 107 ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVY 286
           +SNGS+   M  W P +NKKFETLSYLPPLS + IAK++D+M++KGW PC+EFD++G V+
Sbjct: 39  VSNGSKTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVF 98

Query: 287 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVL 436
           R++    GYYDGRYW +WKLPMFGC DA+ VL EI EC K YP A+IR L
Sbjct: 99  RKNSQIPGYYDGRYWTLWKLPMFGCNDASQVLNEIHECKKTYPNAYIRCL 148


>tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Triticum urartu GN=rbcS PE=3 SV=1
          Length = 165

 Score =  162 bits (409), Expect = 1e-38
 Identities = 68/112 (60%), Positives = 85/112 (75%)
 Frame = +2

Query: 104 AISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 283
           ++SNG R+  M VW     KKFETLSYLPPLS+E + KQVD+++R  W PC+EF K+G V
Sbjct: 33  SVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFV 92

Query: 284 YREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
           +REH+   GYYDGRYW MWKLPMFGC DA  VL E+ E  KEYP+A++RV+G
Sbjct: 93  FREHYSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIG 144


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
           chain OS=Ammopiptanthus mongolicus PE=2 SV=1
          Length = 174

 Score =  162 bits (409), Expect = 1e-38
 Identities = 69/111 (62%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
 Frame = +2

Query: 110 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 286
           +NG RV  MLVW P   KKFETLSYLPPLS E + K+V++++RKGW PC+EF+ + G VY
Sbjct: 42  NNGGRVQCMLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEFELEHGFVY 101

Query: 287 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
           RE+    GYYDGRYW MWKLPMFGC DA+ V++E+ EC KEYP AF+R++G
Sbjct: 102 RENNRSPGYYDGRYWTMWKLPMFGCSDASQVMKELEECKKEYPTAFVRIIG 152


>tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small
           chain OS=Triticum aestivum GN=rbcS PE=3 SV=1
          Length = 174

 Score =  161 bits (407), Expect = 2e-38
 Identities = 69/111 (62%), Positives = 84/111 (75%)
 Frame = +2

Query: 107 ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVY 286
           +SNG R+  M VW     KKFETLSYLPPLS+E + KQVD+++R  W PC+EF K+G V+
Sbjct: 38  VSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVF 97

Query: 287 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
           REH   SGYYDGRYW MWKLPMFGC DA  VL E+ E  KEYP+A++RV+G
Sbjct: 98  REHNSSSGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIG 148


>tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small
           chain OS=Secale cereale PE=2 SV=1
          Length = 175

 Score =  160 bits (405), Expect = 3e-38
 Identities = 68/112 (60%), Positives = 85/112 (75%)
 Frame = +2

Query: 104 AISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 283
           ++SNG R+  M VW     KKFETLSYLPPLS+E + KQVD+++R  W PC+EF K+G V
Sbjct: 38  SVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFV 97

Query: 284 YREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
           +REH +  GYYDGRYW MWKLPMFGC DA  VL E+ E  KEYP+A++RV+G
Sbjct: 98  FREHNNSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIG 149


>tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Avena maroccana GN=rbcS PE=2 SV=1
          Length = 168

 Score =  160 bits (404), Expect = 4e-38
 Identities = 66/112 (58%), Positives = 85/112 (75%)
 Frame = +2

Query: 104 AISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 283
           ++SNG R+  M VW     KKFETLSYLPPLS E + KQ+DF++R  W PC+EF K+G +
Sbjct: 33  SVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSEEALLKQIDFLIRSKWVPCLEFSKVGFI 92

Query: 284 YREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 439
           +REH    GYYDGRYW MWKLPMFGC DA+ V+RE+ E  KEYP+A++R++G
Sbjct: 93  FREHGSTPGYYDGRYWTMWKLPMFGCTDASQVIREVEEVKKEYPDAYVRIIG 144