DK947566
Clone id YMU02A01NGRL0016_E23
Library
Length 226
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_E23. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
CTAGAAAGCTTCAGCCCAGAAATGAAGCCAGTAATGGCCGCTACAACATGGGATTGGATA
AATTTTTCACCCCGGATCCTGTTGTAGCTCTGCCAATTGTATCTTTTGGTCTTCTTCCCT
CTTGCATTGTAGAAGAGCCGAAGCTGGCTTTTTGTATTATGATTGGCATTTTGTGTATTA
AACCTTGTGCTTTCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q5U3A7
Definition sp|Q5U3A7|OPA1_DANRE Dynamin-like 120 kDa protein, mitochondrial OS=Danio rerio
Align length 24
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947566|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_E23, 5'
(197 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5U3A7|OPA1_DANRE Dynamin-like 120 kDa protein, mitochondrial... 30 2.9

>sp|Q5U3A7|OPA1_DANRE Dynamin-like 120 kDa protein, mitochondrial
OS=Danio rerio GN=opa1 PE=2 SV=1
Length = 966

Score = 30.4 bits (67), Expect = 2.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2

Query: 104 FWSSSLLHCRRAEAGFLYYDWHFV 175
F +LLHC GF YY HFV
Sbjct: 851 FLQKALLHCNLCRRGFYYYQRHFV 874


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947566|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_E23, 5'
(197 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******