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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947579
Clone id YMU02A01NGRL0016_F19
Library
Length 508
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_F19. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAAATCGTATGTGCATACTGATGAGGTAAGCACGACTGTAAGAGAGGGCCACGTAGCTGG
AAGGAACATCGCCATTTCTCACAGGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GGAGCACAATGCCGAGTGCAGAGGCGACATGGAATGGAGCGGTTTTGGCGGTAACACACA
AGTTTGAGACGGTGGAGGGCAATGTCTATTTCCCCCCCTCCTCTGTCAACATGCAGTACA
TGAAACCCAGCTCCACGCATACAACCTGCGGTTGGAAAGGCGTCGCCTCCTACTACACGG
TGGAGGTAGACGGCAAACAGAACAAGGACTCCGCTTGGTTTTACCCGTCACCTCTCCCTG
CTGCTTCCAACATCAAGGATCAAGTGGCATTTTGGAAGGGCGTCTCTGTGCCAAAGAAAA
CTTGATGTACATTATACTAAGCTATTGTCGACAGATGAAAGCCTGTATCTCTGGGTGTAT
TAATAAGCGTAATGATCTTGTTTGACTC
■■Homology search results ■■ -
sp_hit_id Q9S740
Definition sp|Q9S740|AGP19_ARATH Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana
Align length 31
Score (bit) 29.6
E-value 8.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947579|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_F19, 5'
         (508 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9S740|AGP19_ARATH Lysine-rich arabinogalactan protein 19 OS=...    30   8.6  

>sp|Q9S740|AGP19_ARATH Lysine-rich arabinogalactan protein 19
           OS=Arabidopsis thaliana GN=AGP19 PE=2 SV=1
          Length = 222

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 199 AMSISPPPLSTCST*NPAPRIQPAVGKASPP 291
           A  ++PPP  T  T  PAP++ P +  A+PP
Sbjct: 68  ASPVTPPPAVT-PTSPPAPKVAPVISPATPP 97
tr_hit_id Q2JQ46
Definition tr|Q2JQ46|Q2JQ46_SYNJB Putative uncharacterized protein OS=Synechococcus sp. (strain JA-2-3B'a(2-13))
Align length 89
Score (bit) 138.0
E-value 1.0e-31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947579|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_F19, 5'
         (508 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2JQ46|Q2JQ46_SYNJB Putative uncharacterized protein OS=Synec...   138   1e-31
tr|Q2JWQ6|Q2JWQ6_SYNJA Putative uncharacterized protein OS=Synec...   138   2e-31
tr|A9SRJ7|A9SRJ7_PHYPA Predicted protein OS=Physcomitrella paten...   138   2e-31
tr|B1WU25|B1WU25_CYAA5 DUF427-containing protein OS=Cyanothece (...   136   5e-31
tr|B7K888|B7K888_9CHRO Putative uncharacterized protein OS=Cyano...   136   5e-31
tr|B8HVI8|B8HVI8_9CHRO Putative uncharacterized protein OS=Cyano...   135   1e-30
tr|B5VYY0|B5VYY0_SPIMA Putative uncharacterized protein OS=Arthr...   134   2e-30
tr|P73685|P73685_SYNY3 Ssl3291 protein OS=Synechocystis sp. (str...   134   2e-30
tr|B7JYF4|B7JYF4_SYNP8 Putative uncharacterized protein OS=Synec...   133   4e-30
tr|B4BZD7|B4BZD7_9CHRO Putative uncharacterized protein OS=Cyano...   133   4e-30
tr|A8YD79|A8YD79_MICAE Similar to tr|P73685|P73685 OS=Microcysti...   131   2e-29
tr|B0CF91|B0CF91_ACAM1 Putative uncharacterized protein OS=Acary...   130   3e-29
tr|Q8DI22|Q8DI22_THEEB Tlr1770 protein OS=Thermosynechococcus el...   130   5e-29
tr|B1XRM9|B1XRM9_SYNP2 Putative uncharacterized protein OS=Synec...   130   5e-29
tr|Q4C504|Q4C504_CROWT Putative uncharacterized protein OS=Croco...   127   3e-28
tr|B0JPJ3|B0JPJ3_MICAN Putative uncharacterized protein OS=Micro...   126   7e-28
tr|A3IM18|A3IM18_9CHRO Putative uncharacterized protein OS=Cyano...   125   2e-27
tr|B4B1M1|B4B1M1_9CHRO Putative uncharacterized protein OS=Cyano...   124   3e-27
tr|Q8Z0N1|Q8Z0N1_ANASP Asl0060 protein OS=Anabaena sp. (strain P...   124   3e-27
tr|Q7NJ65|Q7NJ65_GLOVI Gsl1967 protein OS=Gloeobacter violaceus ...   124   3e-27
tr|Q3M9R1|Q3M9R1_ANAVT Putative uncharacterized protein OS=Anaba...   122   1e-26
tr|Q5YYH0|Q5YYH0_NOCFA Putative uncharacterized protein OS=Nocar...   122   1e-26
tr|B2J7Y2|B2J7Y2_NOSP7 Putative uncharacterized protein OS=Nosto...   119   8e-26
tr|B4VTQ1|B4VTQ1_9CYAN Conserved domain protein OS=Microcoleus c...   119   8e-26
tr|B2HRL1|B2HRL1_MYCMM Putative uncharacterized protein OS=Mycob...   119   1e-25
tr|Q1IXJ4|Q1IXJ4_DEIGD Putative uncharacterized protein OS=Deino...   117   3e-25
tr|Q2SNZ2|Q2SNZ2_HAHCH Uncharacterized protein conserved in bact...   117   4e-25
tr|A0PLR8|A0PLR8_MYCUA Putative uncharacterized protein OS=Mycob...   116   7e-25
tr|A0ZBL6|A0ZBL6_NODSP Putative uncharacterized protein OS=Nodul...   115   9e-25
tr|B8EMG1|B8EMG1_METSI Putative uncharacterized protein OS=Methy...   115   2e-24

>tr|Q2JQ46|Q2JQ46_SYNJB Putative uncharacterized protein
           OS=Synechococcus sp. (strain JA-2-3B'a(2-13))
           GN=CYB_0069 PE=4 SV=1
          Length = 94

 Score =  138 bits (348), Expect = 1e-31
 Identities = 58/89 (65%), Positives = 73/89 (82%)
 Frame = +3

Query: 144 ATWNGAVLAVTHKFETVEGNVYFPPSSVNMQYMKPSSTHTTCGWKGVASYYTVEVDGKQN 323
           A WNG V+A T ++ETVEGN+YFPP S+  +Y +PSSTHTTC WKG ASYYT+ V+G++N
Sbjct: 4   AIWNGVVVAETERYETVEGNIYFPPESLRREYFQPSSTHTTCPWKGEASYYTLVVNGQEN 63

Query: 324 KDSAWFYPSPLPAASNIKDQVAFWKGVSV 410
           KD+AW+YP P PAA+NI+  VAFWKGV V
Sbjct: 64  KDAAWYYPDPKPAAANIRGYVAFWKGVKV 92


>tr|Q2JWQ6|Q2JWQ6_SYNJA Putative uncharacterized protein
           OS=Synechococcus sp. (strain JA-3-3Ab) GN=CYA_0587 PE=4
           SV=1
          Length = 94

 Score =  138 bits (347), Expect = 2e-31
 Identities = 58/89 (65%), Positives = 73/89 (82%)
 Frame = +3

Query: 144 ATWNGAVLAVTHKFETVEGNVYFPPSSVNMQYMKPSSTHTTCGWKGVASYYTVEVDGKQN 323
           A WNG V+A T ++ETVEGN+YFPP S+  +Y +PSSTHTTC WKG ASYYT+ V+G++N
Sbjct: 4   AIWNGVVVAETDRYETVEGNIYFPPESLRWEYFQPSSTHTTCPWKGQASYYTLVVNGQEN 63

Query: 324 KDSAWFYPSPLPAASNIKDQVAFWKGVSV 410
           KD+AW+YP P PAA+NI+  VAFWKGV V
Sbjct: 64  KDAAWYYPDPKPAAANIRGYVAFWKGVEV 92


>tr|A9SRJ7|A9SRJ7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_134103 PE=4 SV=1
          Length = 84

 Score =  138 bits (347), Expect = 2e-31
 Identities = 57/81 (70%), Positives = 71/81 (87%)
 Frame = +3

Query: 135 SAEATWNGAVLAVTHKFETVEGNVYFPPSSVNMQYMKPSSTHTTCGWKGVASYYTVEVDG 314
           + +A WNGA +A T  +E VEGNVYFPP++++MQY KPS+THTTCGWKGVASYYT+EVDG
Sbjct: 2   ATKAIWNGATIAATDVYEVVEGNVYFPPTAIDMQYFKPSNTHTTCGWKGVASYYTIEVDG 61

Query: 315 KQNKDSAWFYPSPLPAASNIK 377
           K NKD+AWFYP+P PAA+N+K
Sbjct: 62  KVNKDAAWFYPTPKPAAANVK 82


>tr|B1WU25|B1WU25_CYAA5 DUF427-containing protein OS=Cyanothece
           (strain ATCC 51142) GN=cce_2739 PE=4 SV=1
          Length = 94

 Score =  136 bits (343), Expect = 5e-31
 Identities = 59/93 (63%), Positives = 72/93 (77%)
 Frame = +3

Query: 138 AEATWNGAVLAVTHKFETVEGNVYFPPSSVNMQYMKPSSTHTTCGWKGVASYYTVEVDGK 317
           A A WNG +LA +++ E VEGN YFPP S+N QY K S THTTC WKG ASYYT+EV+G+
Sbjct: 2   AIAIWNGVILAESNQCEMVEGNYYFPPDSINKQYFKESDTHTTCFWKGQASYYTIEVNGQ 61

Query: 318 QNKDSAWFYPSPLPAASNIKDQVAFWKGVSVPK 416
           +NKD+AW+YP+P   A NIKD VAFWKGV + K
Sbjct: 62  ENKDAAWYYPTPKEKAQNIKDYVAFWKGVQIEK 94


>tr|B7K888|B7K888_9CHRO Putative uncharacterized protein
           OS=Cyanothece sp. PCC 7424 GN=PCC7424_1404 PE=4 SV=1
          Length = 94

 Score =  136 bits (343), Expect = 5e-31
 Identities = 58/90 (64%), Positives = 73/90 (81%)
 Frame = +3

Query: 141 EATWNGAVLAVTHKFETVEGNVYFPPSSVNMQYMKPSSTHTTCGWKGVASYYTVEVDGKQ 320
           +A WNGA+LA +   E VEGN YFPP S+N +Y K SSTHT+C WKG ASYYT+EVDG+Q
Sbjct: 3   QAIWNGAILAQSDNCEVVEGNYYFPPDSINKEYFKESSTHTSCPWKGQASYYTIEVDGQQ 62

Query: 321 NKDSAWFYPSPLPAASNIKDQVAFWKGVSV 410
           NKD+AW+YP+P   A+NIK+ VAFW+GV+V
Sbjct: 63  NKDAAWYYPNPKEKANNIKNYVAFWRGVTV 92


>tr|B8HVI8|B8HVI8_9CHRO Putative uncharacterized protein
           OS=Cyanothece sp. PCC 7425 GN=Cyan7425_3986 PE=4 SV=1
          Length = 94

 Score =  135 bits (339), Expect = 1e-30
 Identities = 58/91 (63%), Positives = 69/91 (75%)
 Frame = +3

Query: 144 ATWNGAVLAVTHKFETVEGNVYFPPSSVNMQYMKPSSTHTTCGWKGVASYYTVEVDGKQN 323
           A WNGAVLA + + E VEGN YFPP S+N  Y +PS THTTC WKGVASYY++EVDG+ N
Sbjct: 4   AIWNGAVLAQSDRCEVVEGNQYFPPDSINQDYFRPSDTHTTCPWKGVASYYSIEVDGQVN 63

Query: 324 KDSAWFYPSPLPAASNIKDQVAFWKGVSVPK 416
           KD+AW+YP P  AA  IK  +AFWKGV V +
Sbjct: 64  KDAAWYYPEPKDAAKQIKGYIAFWKGVKVER 94


>tr|B5VYY0|B5VYY0_SPIMA Putative uncharacterized protein
           OS=Arthrospira maxima CS-328 GN=AmaxDRAFT_1722 PE=4 SV=1
          Length = 94

 Score =  134 bits (338), Expect = 2e-30
 Identities = 58/91 (63%), Positives = 71/91 (78%)
 Frame = +3

Query: 138 AEATWNGAVLAVTHKFETVEGNVYFPPSSVNMQYMKPSSTHTTCGWKGVASYYTVEVDGK 317
           A+A WNG V+A ++  E VEGN YFPP SV  +Y + S THTTCGWKGVASYYT+EV G+
Sbjct: 2   AKAIWNGVVIAESNNCEVVEGNQYFPPDSVKKEYFRNSDTHTTCGWKGVASYYTLEVGGE 61

Query: 318 QNKDSAWFYPSPLPAASNIKDQVAFWKGVSV 410
            NKD+AW+YPSPLPAA  I+  +AFW+GV V
Sbjct: 62  VNKDAAWYYPSPLPAAQKIQGYIAFWRGVKV 92


>tr|P73685|P73685_SYNY3 Ssl3291 protein OS=Synechocystis sp. (strain
           PCC 6803) GN=ssl3291 PE=4 SV=1
          Length = 94

 Score =  134 bits (337), Expect = 2e-30
 Identities = 57/91 (62%), Positives = 70/91 (76%)
 Frame = +3

Query: 138 AEATWNGAVLAVTHKFETVEGNVYFPPSSVNMQYMKPSSTHTTCGWKGVASYYTVEVDGK 317
           A+A WNG VLA + + E VEGN YFPP S++ QY +PS+THT CGWKG ASYYTV VDG+
Sbjct: 2   AKAIWNGVVLAESDQCEMVEGNYYFPPDSIHPQYFQPSNTHTVCGWKGTASYYTVVVDGQ 61

Query: 318 QNKDSAWFYPSPLPAASNIKDQVAFWKGVSV 410
           +N D+AW+YP P P A NIK  +AFW+GV V
Sbjct: 62  ENPDAAWYYPDPKPRAENIKGYIAFWRGVKV 92


>tr|B7JYF4|B7JYF4_SYNP8 Putative uncharacterized protein
           OS=Synechococcus sp. (strain PCC 8801 / RF-1)
           GN=PCC8801_0006 PE=4 SV=1
          Length = 94

 Score =  133 bits (335), Expect = 4e-30
 Identities = 57/89 (64%), Positives = 69/89 (77%)
 Frame = +3

Query: 144 ATWNGAVLAVTHKFETVEGNVYFPPSSVNMQYMKPSSTHTTCGWKGVASYYTVEVDGKQN 323
           ATWNGA+LA +   ETVEGN YFPP S+N +Y K S+THTTC WKG ASYYT+EVDG+QN
Sbjct: 4   ATWNGAILAQSDHCETVEGNYYFPPDSINKEYFKDSNTHTTCSWKGEASYYTIEVDGQQN 63

Query: 324 KDSAWFYPSPLPAASNIKDQVAFWKGVSV 410
           KD+AW+YP     A NI+  +AFW+GV V
Sbjct: 64  KDAAWYYPHTKEKAKNIEGYIAFWRGVKV 92


>tr|B4BZD7|B4BZD7_9CHRO Putative uncharacterized protein
           OS=Cyanothece sp. PCC 8802 GN=Cyan8802DRAFT_2154 PE=4
           SV=1
          Length = 94

 Score =  133 bits (335), Expect = 4e-30
 Identities = 57/89 (64%), Positives = 69/89 (77%)
 Frame = +3

Query: 144 ATWNGAVLAVTHKFETVEGNVYFPPSSVNMQYMKPSSTHTTCGWKGVASYYTVEVDGKQN 323
           ATWNGA+LA +   ETVEGN YFPP S+N +Y K S+THTTC WKG ASYYT+EVDG+QN
Sbjct: 4   ATWNGAILAQSDHCETVEGNYYFPPDSINKEYFKDSNTHTTCSWKGEASYYTIEVDGQQN 63

Query: 324 KDSAWFYPSPLPAASNIKDQVAFWKGVSV 410
           KD+AW+YP     A NI+  +AFW+GV V
Sbjct: 64  KDAAWYYPHTKEKAKNIEGYIAFWRGVKV 92