DK947586 |
Clone id |
YMU02A01NGRL0016_G02 |
Library |
YMU02 |
Length |
527 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_G02. 5' end sequence. |
Accession |
DK947586 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL34Contig1 |
Sequence |
AAGACTGGATTCTGATTTCGAAAACTGCCTCTAAGAAGGTGAAGAGCTTGCACCAATCTG CTGAATTTACAGAGCAGTGTACAAAGTGTGAGAAGGAGAATGTAAACAATGCGTTGTGGA ACTGCCTTTCATACCCATTTGTTAGAGAAAAGATGTCTTCAGGGGAGTTGACTCTTCATG GCGGTTACTATGATTTTGTGAACAATGCATTTGAGAGTTGGTCGGTAGATTTGGCATCAA TGTCGAAGGTCGAAAAGGTGCATTAAGTGGGTACAGACTGTCTCTAGGATGGAGGGTAAC TAACAAAGAATTGCTGTGAGCGGCAAATAGCCTTCCTCTTCTCACGAGAGAGAAAGATGG TGTAGCAGCAATGAGTGTTCTTCATGGCATATGAGTTATATTGCTCTTGATTCGAGTTAT GCATATCCAGAAAAACCATCTTGAGTGTATCATATATTGTAACTAATCGATGGCATCGGG TTGGGACTATGGTTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P16016 |
Definition |
sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia oleracea |
Align length |
76 |
Score (bit) |
86.7 |
E-value |
5.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947586|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0016_G02, 5' (494 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinac... 87 5e-17 sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sa... 85 2e-16 sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thalian... 83 6e-16 sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis P... 82 1e-15 sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicoti... 82 2e-15 sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria... 82 2e-15 sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabid... 81 2e-15 sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=... 81 3e-15 sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2... 81 3e-15 sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=... 80 5e-15 sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeu... 78 3e-14 sp|Q9I262|CYNT_PSEAE Carbonic anhydrase OS=Pseudomonas aeruginos... 34 0.32 sp|Q54735|CYNT_SYNY3 Carbonic anhydrase OS=Synechocystis sp. (st... 33 0.55 sp|P0ABE9|CYNT_ECOLI Carbonic anhydrase 1 OS=Escherichia coli (s... 32 2.1 sp|P0ABF0|CYNT_ECO57 Carbonic anhydrase 1 OS=Escherichia coli O1... 32 2.1 sp|P27134|CYNT_SYNE7 Carbonic anhydrase OS=Synechococcus elongat... 31 2.7 sp|P46551|CD2L7_CAEEL Putative cell division cycle 2-related pro... 31 3.5 sp|Q3E9Z8|FB236_ARATH Putative F-box protein At4g17780 OS=Arabid... 30 6.0
>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2 Length = 319
Score = 86.7 bits (213), Expect = 5e-17 Identities = 40/76 (52%), Positives = 50/76 (65%) Frame = +3
Query: 3 DWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHG 182 DW+ I A KV + H +A F EQCT CEKE VN +L N L+YPFVR+ + L L G Sbjct: 235 DWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQG 294
Query: 183 GYYDFVNNAFESWSVD 230 GYYDFVN +FE W ++ Sbjct: 295 GYYDFVNGSFELWGLE 310
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1 Length = 328
Score = 85.1 bits (209), Expect = 2e-16 Identities = 40/81 (49%), Positives = 50/81 (61%) Frame = +3
Query: 3 DWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHG 182 +W+ I A KVK+ H A F E CT CEKE VN +L N L+YPFVRE + + L L G Sbjct: 244 EWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKG 303
Query: 183 GYYDFVNNAFESWSVDLASMS 245 GYYDFV +FE W ++ S Sbjct: 304 GYYDFVKGSFELWGLEFGLSS 324
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2 Length = 259
Score = 83.2 bits (204), Expect = 6e-16 Identities = 38/75 (50%), Positives = 50/75 (66%) Frame = +3
Query: 3 DWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHG 182 DW+ I A KV + +S+ F +QC +CE+E VN +L N L+YPFVRE + G L L G Sbjct: 175 DWVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKG 234
Query: 183 GYYDFVNNAFESWSV 227 GYYDFVN +FE W + Sbjct: 235 GYYDFVNGSFELWEL 249
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1 Length = 330
Score = 82.0 bits (201), Expect = 1e-15 Identities = 36/81 (44%), Positives = 49/81 (60%) Frame = +3
Query: 3 DWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHG 182 DW+ + A KV + H +QC +CEKE VN +L N L+YPFVR+ + + L L G Sbjct: 246 DWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKG 305
Query: 183 GYYDFVNNAFESWSVDLASMS 245 G+YDFVN FE W++D S Sbjct: 306 GHYDFVNGTFELWALDFGLSS 326
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 321
Score = 81.6 bits (200), Expect = 2e-15 Identities = 38/76 (50%), Positives = 47/76 (61%) Frame = +3
Query: 3 DWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHG 182 DW+ I A KV+ H F +QCT CEKE VN +L N L+YPFVRE + L L G Sbjct: 237 DWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKG 296
Query: 183 GYYDFVNNAFESWSVD 230 G+YDFVN FE W ++ Sbjct: 297 GHYDFVNGGFELWGLE 312
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1 Length = 190
Score = 81.6 bits (200), Expect = 2e-15 Identities = 36/75 (48%), Positives = 52/75 (69%) Frame = +3
Query: 6 WILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGG 185 W+ + A KVK+ + EF + CTKCEKE VN +L N L+YPFVR+ + + +L+L G Sbjct: 107 WVKLGLPAKSKVKANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGA 166
Query: 186 YYDFVNNAFESWSVD 230 +YDFVN AF+ W++D Sbjct: 167 HYDFVNGAFDLWNLD 181
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2 Length = 347
Score = 81.3 bits (199), Expect = 2e-15 Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 2/88 (2%) Frame = +3
Query: 3 DWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHG 182 DW+ I A KV S + F +QC +CE+E VN +L N L+YPFVRE + G L L G Sbjct: 252 DWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKG 311
Query: 183 GYYDFVNNAFESWSVD--LASMSKVEKV 260 GYYDFV AFE W ++ L+ S V+ V Sbjct: 312 GYYDFVKGAFELWGLEFGLSETSSVKDV 339
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1 Length = 329
Score = 80.9 bits (198), Expect = 3e-15 Identities = 36/81 (44%), Positives = 48/81 (59%) Frame = +3
Query: 3 DWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHG 182 DW+ + A KV + H +QC CEKE VN +L N L+YPFVR+ + + L L G Sbjct: 245 DWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKG 304
Query: 183 GYYDFVNNAFESWSVDLASMS 245 G+YDFVN FE W++D S Sbjct: 305 GHYDFVNGTFELWALDFGLSS 325
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1 Length = 330
Score = 80.9 bits (198), Expect = 3e-15 Identities = 36/81 (44%), Positives = 48/81 (59%) Frame = +3
Query: 3 DWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHG 182 DW+ + A KV + H +QC CEKE VN +L N L+YPFVR+ + + L L G Sbjct: 246 DWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKG 305
Query: 183 GYYDFVNNAFESWSVDLASMS 245 G+YDFVN FE W++D S Sbjct: 306 GHYDFVNGTFELWALDFGLSS 326
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2 Length = 330
Score = 80.1 bits (196), Expect = 5e-15 Identities = 36/81 (44%), Positives = 48/81 (59%) Frame = +3
Query: 3 DWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHG 182 DW+ + A KV + H +QC CEKE VN +L N L+YPFVR+ + + L L G Sbjct: 246 DWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKG 305
Query: 183 GYYDFVNNAFESWSVDLASMS 245 G+YDFVN FE W++D S Sbjct: 306 GHYDFVNGTFELWALDFGLSS 326
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QVV7 |
Definition |
tr|A7QVV7|A7QVV7_VITVI Carbonic anhydrase OS=Vitis vinifera |
Align length |
75 |
Score (bit) |
87.0 |
E-value |
4.0e-16 |
Report |
|