DK947590 [AcEST]

DK947590
Clone id	YMU02A01NGRL0016_G08
Library	YMU02
Length	241
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_G08. 5' end sequence.
Accession	DK947590
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	CL120Contig1
Sequence	GATCTAACAAGAAAAAAAAAAGTAAAGCTCACTCTCGCCCGTAAATTTAGTGCTAAATTG TAATAAAATTGCTTCTCATAAACAGAAGTGTATGAATGAAAAACTGACGAAGCTCCGCGG GAACTACCAGTATATCGATTTACAATAAGTAAGAAGTGATGTTGCAGTTACGAGGAGCCG GTCGGAAGGAGACTTCCACATCCGGTTCTGTAGCAAAAAAAAAAAAAAAAAAAAAAAAAA A
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK947590\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0016_G08, 5' (214 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q4HJJ2
Definition	tr\|Q4HJJ2\|Q4HJJ2_CAMLA Putative uncharacterized protein OS=Campylobacter lari RM2100
Align length	49
Score (bit)	33.9
E-value	4.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK947590\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0016_G08, 5' (214 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q4HJJ2\|Q4HJJ2_CAMLA Putative uncharacterized protein OS=Campy... 34 4.2 >tr\|Q4HJJ2\|Q4HJJ2_CAMLA Putative uncharacterized protein OS=Campylobacter lari RM2100 GN=CLA0234 PE=4 SV=1 Length = 216 Score = 33.9 bits (76), Expect = 4.2 Identities = 16/49 (32%), Positives = 29/49 (59%) Frame = +2 Query: 26 SSLSPVNLVLNCNKIASHKQKCMNEKLTKLRGNYQYIDLQ*VRSDVAVT 172 S + P NL L+ NKI + K+ C N+++ K+R + D +++ V V+ Sbjct: 82 SLIYPDNLNLDINKIEAEKKTCFNQEIEKIRKEVFHSDFSIIQARVGVS 130