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NBDC - LSDB Archive
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DK947596
Clone id YMU02A01NGRL0016_G15
Library
Length 546
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_G15. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AGCACGCACTGTGAGATCTCGCTTTCTAGCGGAGTTCGTCGTCCTGCGACATGGCTGCCC
TCGCTGCCGCGTCCGTCTCCAACGCTGCTGCTCTGGGCAACAGCCTTGCCACCAAGAATG
CTCTTCGCGAGAAGGTCCCTGTGGTGCAGGCCAGAGTCAGCATGAATTCAGAGTACTGGT
ATGGGCCCGATCGCCCCAAATACCTTGGCCCCTTCTCTGCCCAGACCCCTTCCTACCTCA
AGGGCGAGTTCCCTGGCGATTACGGCTGGGACACCGCTGGCCTATCTGCAGACCCTGAGG
CATTTGCTAAGAACAGGGCCTTGGAGGTTATTCACAGCCGATGGGCCATGCTTGGAGCTT
TGGGATGCATCTTCCCAGAGGTTGCACAGAAGTATCTGAATGTGTCCTTCAAGGAGGCAG
TCTGGTTCAAGGCTGGAGCACAGATTTTCTCAGAGGGTGGGTTGGACTACCTCGGCAACC
CCAACCTTGTTCATGCACAGAGCATTCTCGCCATTTGGGCATGCCAGGTGGTGTTGATGG
GAGCTG
■■Homology search results ■■ -
sp_hit_id P27489
Definition sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum
Align length 146
Score (bit) 241.0
E-value 2.0e-63
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947596|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_G15, 5'
         (546 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop...   241   2e-63
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...   236   4e-62
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   229   5e-60
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   227   3e-59
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   227   3e-59
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   226   4e-59
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   226   6e-59
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   225   9e-59
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   224   2e-58
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   223   4e-58
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   222   8e-58
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   222   8e-58
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   222   1e-57
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   222   1e-57
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   221   1e-57
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   221   1e-57
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   221   2e-57
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   221   2e-57
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   221   2e-57
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   221   2e-57
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   221   2e-57
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   221   2e-57
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   221   2e-57
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   220   3e-57
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   220   3e-57
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   220   3e-57
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   220   4e-57
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   219   9e-57
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   219   9e-57
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   218   1e-56

>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13,
           chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1
          Length = 265

 Score =  241 bits (615), Expect = 2e-63
 Identities = 116/146 (79%), Positives = 128/146 (87%), Gaps = 2/146 (1%)
 Frame = +3

Query: 111 TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGL 284
           TKNA  LR+ V +  AR +M+++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGL
Sbjct: 23  TKNANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGL 82

Query: 285 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 464
           SADPEAFAKNRALEVIH RWAMLGALGCIFPEV +K++ V FKE VWFKAG+QIFS+GGL
Sbjct: 83  SADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGL 142

Query: 465 DYLGNPNLVHAQSILAIWACQVVLMG 542
           DYLGNPNLVHAQSILA+   QVVLMG
Sbjct: 143 DYLGNPNLVHAQSILAVLGFQVVLMG 168



 Score = 30.8 bits (68), Expect = 4.4
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 249 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 365
           +PG   +D  GL+ DP  FA+ +  E+ + R AM    G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226


>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type
           III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1
          Length = 268

 Score =  236 bits (603), Expect = 4e-62
 Identities = 109/140 (77%), Positives = 121/140 (86%)
 Frame = +3

Query: 123 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 302
           LR+       R++M ++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADPEA
Sbjct: 32  LRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA 91

Query: 303 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 482
           FA+NRALEVIH RWAMLGALGC+FPEV QK++ V FKE VWFKAG+QIFSEGGLDYLGNP
Sbjct: 92  FARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP 151

Query: 483 NLVHAQSILAIWACQVVLMG 542
           NLVHAQSILA+   QV+LMG
Sbjct: 152 NLVHAQSILAVLGFQVLLMG 171


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  229 bits (585), Expect = 5e-60
 Identities = 115/151 (76%), Positives = 119/151 (78%), Gaps = 7/151 (4%)
 Frame = +3

Query: 114 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 272
           +N L  KV     RVSM           WYGPDRPKYLGPFS QTPSYL GEFPGDYGWD
Sbjct: 20  QNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 273 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 452
           TAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+  K   V F EAVWFKAG+QIF 
Sbjct: 80  TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKN-GVKFGEAVWFKAGSQIFQ 138

Query: 453 EGGLDYLGNPNLVHAQSILAIWACQVVLMGA 545
           EGGLDYLGNPNLVHAQSILAIWACQVVLMGA
Sbjct: 139 EGGLDYLGNPNLVHAQSILAIWACQVVLMGA 169


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  227 bits (578), Expect = 3e-59
 Identities = 107/122 (87%), Positives = 110/122 (90%)
 Frame = +3

Query: 177 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 356
           WYGPDRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47  WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 357 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 536
           ALGC+FPE+  K   V F EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 537 MG 542
           MG
Sbjct: 166 MG 167


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  227 bits (578), Expect = 3e-59
 Identities = 107/122 (87%), Positives = 110/122 (90%)
 Frame = +3

Query: 177 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 356
           WYGPDRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47  WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 357 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 536
           ALGC+FPE+  K   V F EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 537 MG 542
           MG
Sbjct: 166 MG 167


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  226 bits (577), Expect = 4e-59
 Identities = 110/150 (73%), Positives = 119/150 (79%), Gaps = 7/150 (4%)
 Frame = +3

Query: 114 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 272
           +N L +KV   QAR++M           WYGPDRPKYLGPFS  TPSYL GEFPGDYGWD
Sbjct: 22  QNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWD 81

Query: 273 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 452
           TA +SADPE FAKNR LEVIH RWAMLGALGC+FPE+  K   + F EAVWFKAGAQIFS
Sbjct: 82  TAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKN-GLKFGEAVWFKAGAQIFS 140

Query: 453 EGGLDYLGNPNLVHAQSILAIWACQVVLMG 542
           EGGLDY GNPNL+HAQSILAIWACQVVLMG
Sbjct: 141 EGGLDYAGNPNLIHAQSILAIWACQVVLMG 170


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  226 bits (576), Expect = 6e-59
 Identities = 106/128 (82%), Positives = 111/128 (86%)
 Frame = +3

Query: 159 SMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHS 338
           S  +  WYGPDRPKYLGPFS Q PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH 
Sbjct: 43  SAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 102

Query: 339 RWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIW 518
           RWAMLGALGC+FPE+  K   V F EAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIW
Sbjct: 103 RWAMLGALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIW 161

Query: 519 ACQVVLMG 542
           ACQVVLMG
Sbjct: 162 ACQVVLMG 169



 Score = 30.4 bits (67), Expect = 5.8
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 249 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 365
           +PG   +D  GL+ DP+AFA+ +  E+ + R AM    G
Sbjct: 189 YPGG-AFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFG 226


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  225 bits (574), Expect = 9e-59
 Identities = 114/150 (76%), Positives = 118/150 (78%), Gaps = 7/150 (4%)
 Frame = +3

Query: 114 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 272
           ++ L  KV V   R SM           WYG DRPK+LGPFS QTPSYL GEFPGDYGWD
Sbjct: 20  RDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 273 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 452
           TAGLSADPE FAKNR LEVIHSRWAMLGALGCIFPE+  K   V F EAVWFKAGAQIFS
Sbjct: 80  TAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKN-GVQFGEAVWFKAGAQIFS 138

Query: 453 EGGLDYLGNPNLVHAQSILAIWACQVVLMG 542
           EGGLDYLGNPNLVHAQSILAIWA QVVLMG
Sbjct: 139 EGGLDYLGNPNLVHAQSILAIWATQVVLMG 168



 Score = 31.6 bits (70), Expect = 2.6
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 249 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 365
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 188 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  224 bits (572), Expect = 2e-58
 Identities = 105/122 (86%), Positives = 109/122 (89%)
 Frame = +3

Query: 177 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 356
           WYG DRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 49  WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLG 108

Query: 357 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 536
           ALGC+FPE+  K   V F EAVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAIWACQVVL
Sbjct: 109 ALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 167

Query: 537 MG 542
           MG
Sbjct: 168 MG 169



 Score = 31.6 bits (70), Expect = 2.6
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 249 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 365
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 189 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  223 bits (569), Expect = 4e-58
 Identities = 105/135 (77%), Positives = 116/135 (85%)
 Frame = +3

Query: 141 VVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRA 320
           V + +V+ +   WYGPDR KYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR 
Sbjct: 34  VGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 93

Query: 321 LEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQ 500
           LEVIHSRWAMLGALGC+FPE+  +   V F EAVWFKAG+QIFSEGGLDYLGNP+L+HAQ
Sbjct: 94  LEVIHSRWAMLGALGCVFPELLSRN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQ 152

Query: 501 SILAIWACQVVLMGA 545
           SILAIWACQVVLMGA
Sbjct: 153 SILAIWACQVVLMGA 167



 Score = 30.8 bits (68), Expect = 4.4
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 249 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 365
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 186 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 223
tr_hit_id Q9XQB1
Definition tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding protein OS=Phaseolus aureus
Align length 142
Score (bit) 242.0
E-value 8.0e-63
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947596|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_G15, 5'
         (546 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding pr...   242   8e-63
tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome...   239   5e-62
tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, who...   238   1e-61
tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis...   238   1e-61
tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding prote...   238   2e-61
tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding prote...   237   3e-61
tr|A6H5B7|A6H5B7_VIGUN Putative LHCII type III chlorophyll a/b b...   237   3e-61
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   237   3e-61
tr|Q04918|Q04918_PEA Chlorophyll a/b-binding protein (Chloroplas...   236   8e-61
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   235   1e-60
tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza...   235   1e-60
tr|Q5I8X1|Q5I8X1_PEA Light-harvesting chlorophyll-a/b binding pr...   235   1e-60
tr|Q39339|Q39339_BRANA LHC II Type III chlorophyll a /b binding ...   235   1e-60
tr|Q6ZF30|Q6ZF30_ORYSJ Os07g0562700 protein OS=Oryza sativa subs...   234   2e-60
tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella paten...   233   4e-60
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   233   4e-60
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   233   4e-60
tr|Q9SDT2|Q9SDT2_DAUCA Chlorophyll a/b-binding protein OS=Daucus...   233   5e-60
tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   233   7e-60
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   233   7e-60
tr|Q9S7M0|Q9S7M0_ARATH Type III chlorophyll a/b binding protein ...   232   8e-60
tr|B7SAW4|B7SAW4_BAMOL Chloroplast chlorophyll a/b binding prote...   232   8e-60
tr|B6SUM9|B6SUM9_MAIZE Chlorophyll a-b binding protein of LHCII ...   231   1e-59
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   231   1e-59
tr|B6T1H1|B6T1H1_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   231   2e-59
tr|B6SZT9|B6SZT9_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   231   2e-59
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   231   2e-59
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   231   2e-59
tr|A9PJV4|A9PJV4_POPJC Putative uncharacterized protein OS=Popul...   231   2e-59
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   230   4e-59

>tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding
           protein OS=Phaseolus aureus GN=CipLhcb3 PE=2 SV=1
          Length = 269

 Score =  242 bits (618), Expect = 8e-63
 Identities = 116/142 (81%), Positives = 124/142 (87%)
 Frame = +3

Query: 117 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 296
           N LR+ V +   + SM++E WYGPDR KYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP
Sbjct: 31  NPLRDVVSMGSGKYSMSNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 90

Query: 297 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 476
           EAFAKNRALEVIH RWAMLGALGCI PEV +K+L V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91  EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 477 NPNLVHAQSILAIWACQVVLMG 542
           NPNLVHAQSILA+   QVVLMG
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMG 172


>tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027591001
           PE=4 SV=1
          Length = 264

 Score =  239 bits (611), Expect = 5e-62
 Identities = 113/142 (79%), Positives = 123/142 (86%)
 Frame = +3

Query: 117 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 296
           N LR+ VP+   + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26  NPLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 297 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 476
           EAFA+NRALEVIH RWAMLGALGCI PEV +K+L V FKE +WFKAGAQIFSEGGLDYLG
Sbjct: 86  EAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLG 145

Query: 477 NPNLVHAQSILAIWACQVVLMG 542
           NPNLVHAQSILA+   QVVLMG
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMG 167


>tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00009737001 PE=4 SV=1
          Length = 264

 Score =  238 bits (608), Expect = 1e-61
 Identities = 113/142 (79%), Positives = 122/142 (85%)
 Frame = +3

Query: 117 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 296
           N LRE VP+   + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26  NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 297 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 476
           EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 86  EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 145

Query: 477 NPNLVHAQSILAIWACQVVLMG 542
           NPNLVHAQSILA+   QVVLMG
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMG 167


>tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_001096 PE=4 SV=1
          Length = 269

 Score =  238 bits (608), Expect = 1e-61
 Identities = 113/142 (79%), Positives = 122/142 (85%)
 Frame = +3

Query: 117 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 296
           N LRE VP+   + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 31  NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 90

Query: 297 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 476
           EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91  EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 477 NPNLVHAQSILAIWACQVVLMG 542
           NPNLVHAQSILA+   QVVLMG
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMG 172


>tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding protein
           cab-BO3 OS=Bambusa oldhamii PE=2 SV=1
          Length = 267

 Score =  238 bits (606), Expect = 2e-61
 Identities = 114/146 (78%), Positives = 124/146 (84%), Gaps = 2/146 (1%)
 Frame = +3

Query: 111 TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGL 284
           T NA  LR+       R++M+++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGL
Sbjct: 25  TANASPLRDVAAAANGRITMSNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGL 84

Query: 285 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 464
           SADPEAFA+NRALEVIH RWAMLGALGCI PEV QK+L V FKE VWFKAGAQIFSEGGL
Sbjct: 85  SADPEAFARNRALEVIHGRWAMLGALGCITPEVLQKWLRVDFKEPVWFKAGAQIFSEGGL 144

Query: 465 DYLGNPNLVHAQSILAIWACQVVLMG 542
           DYLGNPNLVHAQSILA+   QV+LMG
Sbjct: 145 DYLGNPNLVHAQSILAVLGFQVILMG 170


>tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding protein
           OS=Medicago falcata GN=CAB PE=2 SV=1
          Length = 266

 Score =  237 bits (605), Expect = 3e-61
 Identities = 113/142 (79%), Positives = 123/142 (86%)
 Frame = +3

Query: 117 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 296
           N LR+ V +  +R +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 28  NPLRDVVAMGTSRFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 87

Query: 297 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 476
           EAFAKNRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAG+QIFSEGGLDYLG
Sbjct: 88  EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 147

Query: 477 NPNLVHAQSILAIWACQVVLMG 542
           NPNLVHAQSILA+   QVVLMG
Sbjct: 148 NPNLVHAQSILAVLGFQVVLMG 169


>tr|A6H5B7|A6H5B7_VIGUN Putative LHCII type III chlorophyll a/b
           binding protein (Fragment) OS=Vigna unguiculata
           GN=CipLhcb3 PE=2 SV=1
          Length = 211

 Score =  237 bits (605), Expect = 3e-61
 Identities = 113/142 (79%), Positives = 123/142 (86%)
 Frame = +3

Query: 117 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 296
           N LR+ V +   + +M+++ WYGPDR KYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP
Sbjct: 31  NPLRDAVSMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 90

Query: 297 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 476
           EAFAKNRALEVIH RWA+LGALGCI PEV  K+L V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91  EAFAKNRALEVIHGRWALLGALGCITPEVLGKWLRVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 477 NPNLVHAQSILAIWACQVVLMG 542
           NPNLVHAQSILA+   QVVLMG
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMG 172


>tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll
           a/b-binding polypeptide (Fragment) OS=Pinus palustris
           GN=Lhcb2 PE=2 SV=1
          Length = 246

 Score =  237 bits (604), Expect = 3e-61
 Identities = 116/150 (77%), Positives = 123/150 (82%), Gaps = 7/150 (4%)
 Frame = +3

Query: 114 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 272
           +N L +KV   QAR++M           WYGPDRPKYLGPFS QTPSYL GEFPGDYGWD
Sbjct: 2   QNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 61

Query: 273 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 452
           TAGLSADPE FAKNR LEVIHSRWAMLGALGC+FPE+  K   V F EAVWFKAGAQIFS
Sbjct: 62  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKN-GVKFGEAVWFKAGAQIFS 120

Query: 453 EGGLDYLGNPNLVHAQSILAIWACQVVLMG 542
           EGGLDYLGNPNL+HAQSILAIWACQVVLMG
Sbjct: 121 EGGLDYLGNPNLIHAQSILAIWACQVVLMG 150


>tr|Q04918|Q04918_PEA Chlorophyll a/b-binding protein (Chloroplast
           chlorophyll-a/b binding protein) OS=Pisum sativum
           GN=Lhcb3*1 PE=2 SV=1
          Length = 265

 Score =  236 bits (601), Expect = 8e-61
 Identities = 111/142 (78%), Positives = 123/142 (86%)
 Frame = +3

Query: 117 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 296
           N LR+ V +  ++ +M ++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 27  NPLRDVVAMGTSKFTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 86

Query: 297 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 476
           EAFAKNRALEVIH RWAMLGALGCI PEV QK++ V FKE VWFKAG+QIFSEGGLDYLG
Sbjct: 87  EAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 146

Query: 477 NPNLVHAQSILAIWACQVVLMG 542
           NPNLVHAQSILA+   Q+VLMG
Sbjct: 147 NPNLVHAQSILAVLGFQIVLMG 168


>tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding protein
           OS=Pachysandra terminalis PE=2 SV=1
          Length = 264

 Score =  235 bits (600), Expect = 1e-60
 Identities = 115/150 (76%), Positives = 122/150 (81%), Gaps = 7/150 (4%)
 Frame = +3

Query: 114 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 272
           +N L +KV V   R+SM+          WYGPDRPKYLGPFS QTPSYL GEFPGDYGWD
Sbjct: 20  QNELVKKVGVFGGRISMHRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 273 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 452
           TAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+  K   V F EAVWFKAGAQIFS
Sbjct: 80  TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKN-GVKFGEAVWFKAGAQIFS 138

Query: 453 EGGLDYLGNPNLVHAQSILAIWACQVVLMG 542
           EGGLDYLGNPNL+HAQSILAIWACQVVLMG
Sbjct: 139 EGGLDYLGNPNLIHAQSILAIWACQVVLMG 168