DK947610
Clone id YMU02A01NGRL0016_H06
Library
Length 357
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_H06. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAGGAGAGTGCTAGTGAAAGGAGGCTTTTTGGAACAGCACTATGTTGTGAGATGAGTTAG
TGCAGGTCTTTTGCTTCACTTGTTTGTTTTAGGCGCACCATTTATGAGTAGTTGATTTGT
AAACAATAAGTCCTGTATCAATTAACGAGCACTTGAGAGATACTTCTTTTGACTTCTTGT
GTACAAGAGAGCTGCTCAAGTTATCAGGTAGCCAAATCGATTTCTCGGGCCTCACGTTTT
TCAGCAGGTTAAAAGCCTTTGTAATGTATTTGGTTTCGAGGGCACAGTTTCGTCTATTGC
AGCAGGCTACATGGAGAAGACCGCTCATAATTATTTGCTAAGCAGTTTTCATTTCAC
■■Homology search results ■■ -
sp_hit_id P36935
Definition sp|P36935|YSV_BPP2 Uncharacterized 30.4 kDa protein in S-V intergenic region OS=Enterobacteria phage P2
Align length 87
Score (bit) 32.3
E-value 0.77
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947610|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_H06, 5'
(357 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P36935|YSV_BPP2 Uncharacterized 30.4 kDa protein in S-V inter... 32 0.77
sp|Q6CXW3|ATG7_KLULA Autophagy-related protein 7 OS=Kluyveromyce... 30 5.0

>sp|P36935|YSV_BPP2 Uncharacterized 30.4 kDa protein in S-V
intergenic region OS=Enterobacteria phage P2 PE=4 SV=1
Length = 261

Score = 32.3 bits (72), Expect = 0.77
Identities = 23/87 (26%), Positives = 41/87 (47%)
Frame = -3

Query: 304 CCNRRNCALETKYITKAFNLLKNVRPEKSIWLPDNLSSSLVHKKSKEVSLKCSLIDTGLI 125
C +N ++ A N L + E S WL + + HKK+ + L +GL+
Sbjct: 177 CKRLQNVFIKDTLPEIACNKLLQLNEEDSEWLSQEIKDNNSHKKALLI-LSLVYFTSGLV 235

Query: 124 VYKSTTHKWCA*NKQVKQKTCTNSSHN 44
++ S T + A NK+V + +N +H+
Sbjct: 236 IFLSYTKFFYA-NKKVLEYKASNKNHS 261


>sp|Q6CXW3|ATG7_KLULA Autophagy-related protein 7 OS=Kluyveromyces
lactis GN=ATG7 PE=3 SV=1
Length = 603

Score = 29.6 bits (65), Expect = 5.0
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +3

Query: 111 VDL*TISPVSINEHLRDTSFDFLCTRELLKLSGSQIDFSGLTFFSRLKAFVMYLVSRAQF 290
+DL I+ +++ LRD SFD + E + L GS ++F+ + F V ++ + Q
Sbjct: 44 LDLENITSNTVSLSLRDDSFDPVLNNEAVTLKGSVLNFNTIESFKSCDK-VKFIKEKGQ- 101

Query: 291 RLLQQ 305
+LL+Q
Sbjct: 102 QLLEQ 106


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947610|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_H06, 5'
(357 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******