DK947635 |
Clone id |
YMU02A01NGRL0016_I11 |
Library |
YMU02 |
Length |
718 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_I11. 5' end sequence. |
Accession |
DK947635 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL2Contig5 |
Sequence |
GCGGGCCTCAAGGCCTCCACCATCGTCGCGCCCAAGTGTGGCAATCCCCTCGCCGTTTCC AATGGCAGCCGTGTCAGCGCCATGCTGGTGTGGAAGCCGTACGACAACAAGAAGTTCGAG ACTCTGTCATATCTGCCGCAGCTGAGTAGCGAGCAGATAGCAAAGCAGGTGGACTACATG GTGCGACAGAACTTTACTCCCTGCATCGAGTTCGACAACATTGGGAGCGTGTACCGGGAG CACTTCCACGGGAGCGGGTACTACGATGGGAGGTACTGGGTGATGTGGAAGCTGCCCATG TTTGGCTGCACCGACTCCGCCGCCGTGCTGCGCGAGATCACGGAGTGCGCCAAGGAGTAC CCCAAGGCATTCATCCGGGTGCTCGGCTTCGATGCCAAGCGGCAAGTTCAGGTTGCTGGC TTCCTTGTCCAGAAGCCCGGCCAGTGAAGTAAATTTTTTCTGCTGCCTCTGAATTTCCCC AGCCCATATATCTAATTTGTTGTGAGCTATCATGAAAGCCTGTCTGTATAGAAACCTGCT AACTTGGGCGGGGATTCTCTAAATTCTGAGCCCCGGGGGCCCTTGGAAACTCCTTGCCTG GTAAATCCAAAACCCAACATCCTGAACTTTGCAGGCCCTGCTGAATGAAAGAAAAGGGGG ATCCTGGTTATTCCTGGGTTTCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q96542 |
Definition |
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa |
Align length |
141 |
Score (bit) |
182.0 |
E-value |
1.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947635|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0016_I11, 5' (685 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 182 1e-45 sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 180 6e-45 sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 179 9e-45 sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 179 1e-44 sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 178 2e-44 sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 178 2e-44 sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 177 4e-44 sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 177 4e-44 sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 177 5e-44 sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha... 177 5e-44 sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai... 175 2e-43 sp|P27985|RBS2_BRANA Ribulose bisphosphate carboxylase small cha... 175 2e-43 sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small cha... 174 4e-43 sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 174 5e-43 sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 173 9e-43 sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai... 173 9e-43 sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha... 172 1e-42 sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 172 1e-42 sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 172 2e-42 sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 172 2e-42 sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai... 172 2e-42 sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 172 2e-42 sp|Q39745|RBS3_FLAPR Ribulose bisphosphate carboxylase small cha... 171 3e-42 sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha... 171 3e-42 sp|Q39749|RBS7_FLAPR Ribulose bisphosphate carboxylase small cha... 171 4e-42 sp|Q39747|RBS5_FLAPR Ribulose bisphosphate carboxylase small cha... 171 4e-42 sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 170 7e-42 sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 170 7e-42 sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 169 1e-41 sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 169 1e-41
>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1 Length = 182
Score = 182 bits (462), Expect = 1e-45 Identities = 86/141 (60%), Positives = 101/141 (71%), Gaps = 3/141 (2%) Frame = +1
Query: 25 VAPKCGNPLA--VSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFT 198 V K N + SNG RV M VW P KKFETLSYLP LSSEQ+AK+VDY++R+N Sbjct: 39 VTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLI 98
Query: 199 PCIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFI 375 PC+EF+ G VYREH GYYDGRYW MWKLPMFGC DS+ VL+E+ EC K YP AFI Sbjct: 99 PCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFI 158
Query: 376 RVLGFDAKRQVQVAGFLVQKP 438 R++GFD KRQVQ+ F+ KP Sbjct: 159 RIIGFDNKRQVQIISFIAYKP 179
>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1 Length = 181
Score = 180 bits (457), Expect = 6e-45 Identities = 87/150 (58%), Positives = 105/150 (70%), Gaps = 5/150 (3%) Frame = +1
Query: 4 GLKASTI--VAPKCGNPLAV--SNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQV 171 GLK++ V K N + SNG RV M VW P KK+ETLSYLP LS E ++K++ Sbjct: 28 GLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEI 87
Query: 172 DYMVRQNFTPCIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITEC 348 DY++R + PC+EF+ G VYREH H GYYDGRYW MWKLPMFGCTDSA V++E+ EC Sbjct: 88 DYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGEC 147
Query: 349 AKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438 KEYP AFIRV+GFD RQVQ F+V KP Sbjct: 148 KKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177
>sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B PE=2 SV=2 Length = 181
Score = 179 bits (455), Expect = 9e-45 Identities = 88/150 (58%), Positives = 105/150 (70%), Gaps = 5/150 (3%) Frame = +1
Query: 4 GLKASTI--VAPKCGNPLA--VSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQV 171 GLK+S V K N + SNG RVS M VW P KKFETLSYLP LS ++AK+V Sbjct: 26 GLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEV 85
Query: 172 DYMVRQNFTPCIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITEC 348 DY++R + PC+EF+ G VYREH + GYYDGRYW MWKLP+FGCTDSA VL+E+ EC Sbjct: 86 DYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEEC 145
Query: 349 AKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438 KEYP AFIR++GFD RQVQ F+ KP Sbjct: 146 KKEYPGAFIRIIGFDNTRQVQCISFIAYKP 175
>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain 1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A PE=1 SV=2 Length = 180
Score = 179 bits (454), Expect = 1e-44 Identities = 85/150 (56%), Positives = 104/150 (69%), Gaps = 5/150 (3%) Frame = +1
Query: 4 GLKASTI--VAPKCGNPLA--VSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQV 171 GLK+S K N + SNG RV+ M VW P KKFETLSYLP L+ ++AK+V Sbjct: 26 GLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAKEV 85
Query: 172 DYMVRQNFTPCIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITEC 348 DY++R + PC+EF+ G VYREH + GYYDGRYW MWKLP+FGCTDSA VL+E+ EC Sbjct: 86 DYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEEC 145
Query: 349 AKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438 KEYP AFIR++GFD RQVQ F+ KP Sbjct: 146 KKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175
>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1 Length = 189
Score = 178 bits (452), Expect = 2e-44 Identities = 78/127 (61%), Positives = 98/127 (77%) Frame = +1
Query: 58 SNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFDNIGSVYR 237 SNGSRV M VW PY NKKFETLSYLP+L+ EQ+ K+V+Y+++ + PC+EF+ G + R Sbjct: 60 SNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKR 119
Query: 238 EHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQVA 417 + + GYYDGRYWVMWKLPMFGCT+++ VL E+ ECAK YP AFIRV+GFD RQVQ Sbjct: 120 VYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCI 179
Query: 418 GFLVQKP 438 F+V KP Sbjct: 180 SFIVHKP 186
>sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small chain 1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B PE=1 SV=1 Length = 181
Score = 178 bits (452), Expect = 2e-44 Identities = 87/150 (58%), Positives = 105/150 (70%), Gaps = 5/150 (3%) Frame = +1
Query: 4 GLKASTI--VAPKCGNPLA--VSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQV 171 GLK+S V K N + SNG RVS M VW P KKFETLSYLP L+ ++AK+V Sbjct: 26 GLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLTDVELAKEV 85
Query: 172 DYMVRQNFTPCIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITEC 348 DY++R + PC+EF+ G VYREH + GYYDGRYW MWKLP+FGCTDSA VL+E+ EC Sbjct: 86 DYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEEC 145
Query: 349 AKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438 KEYP AFIR++GFD RQVQ F+ KP Sbjct: 146 KKEYPGAFIRIIGFDNTRQVQCISFIAYKP 175
>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1 Length = 171
Score = 177 bits (450), Expect = 4e-44 Identities = 78/127 (61%), Positives = 97/127 (76%) Frame = +1
Query: 58 SNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFDNIGSVYR 237 SNG RV M VW P+ N KFETLSYLP L+ EQ+ K+V+Y++R + PC+EFD GS+ R Sbjct: 44 SNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISR 103
Query: 238 EHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQVA 417 ++ GYYDGRYWVMWKLPMFGCT+++ V+ E+ ECAK YPKAFIRV+GFD RQVQ Sbjct: 104 KYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCI 163
Query: 418 GFLVQKP 438 F+V KP Sbjct: 164 SFIVHKP 170
>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1 Length = 180
Score = 177 bits (450), Expect = 4e-44 Identities = 88/147 (59%), Positives = 103/147 (70%), Gaps = 1/147 (0%) Frame = +1
Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180 AGLKA +NGSRVS M VW+PY+N KFETLSYLP LS + +AKQ+DY+ Sbjct: 32 AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91
Query: 181 VRQNFTPCIEFDNIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEY 360 ++ + PCIEFD G+V RE GYYDGRYW MWKLPMFGCTDSA+VLREI EC K Y Sbjct: 92 IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLY 151
Query: 361 -PKAFIRVLGFDAKRQVQVAGFLVQKP 438 K +IR LGFD RQVQ A F+V +P Sbjct: 152 GKKCYIRCLGFDNTRQVQCASFIVHQP 178
>sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B PE=1 SV=2 Length = 181
Score = 177 bits (449), Expect = 5e-44 Identities = 81/128 (63%), Positives = 96/128 (75%), Gaps = 1/128 (0%) Frame = +1
Query: 58 SNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFD-NIGSVY 234 SNG RVS M VW P KKFETLSYLP LS ++AK+VDY++R + PC+EF+ G VY Sbjct: 48 SNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVY 107
Query: 235 REHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQV 414 REH + GYYDGRYW MWKLP+FGCTDSA VL+E+ EC KEYP AFIR++GFD RQVQ Sbjct: 108 REHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQC 167
Query: 415 AGFLVQKP 438 F+ KP Sbjct: 168 ISFIAYKP 175
>sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Brassica napus GN=RBCS PE=2 SV=2 Length = 181
Score = 177 bits (449), Expect = 5e-44 Identities = 86/150 (57%), Positives = 104/150 (69%), Gaps = 5/150 (3%) Frame = +1
Query: 4 GLKASTI--VAPKCGNPLA--VSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQV 171 GLK+S+ V K N + VSNG RVS M VW P KKFETLSYLP L+ ++ K+V Sbjct: 26 GLKSSSAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKKKFETLSYLPDLTEVELGKEV 85
Query: 172 DYMVRQNFTPCIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITEC 348 DY++R + PC+EF+ G VYREH GYYDGRYW MWKLP+FGCTDSA VL+E+ EC Sbjct: 86 DYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQEC 145
Query: 349 AKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438 EYP AFIR++GFD RQVQ F+ KP Sbjct: 146 KTEYPNAFIRIIGFDNNRQVQCISFIAYKP 175
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q43110 |
Definition |
tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata |
Align length |
148 |
Score (bit) |
274.0 |
E-value |
3.0e-72 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947635|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0016_I11, 5' (685 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 274 3e-72 tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 197 4e-49 tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 197 5e-49 tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 197 5e-49 tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 197 5e-49 tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 196 1e-48 tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 195 3e-48 tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 186 2e-45 tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c... 184 5e-45 tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 183 8e-45 tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 183 1e-44 tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 182 1e-44 tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 182 2e-44 tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 181 5e-44 tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c... 180 7e-44 tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c... 180 7e-44 tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 180 7e-44 tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c... 179 1e-43 tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c... 179 1e-43 tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c... 179 1e-43 tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c... 179 1e-43 tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c... 179 1e-43 tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 178 3e-43 tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c... 178 3e-43 tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c... 178 3e-43 tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 178 3e-43 tr|A9NM29|A9NM29_PICSI Ribulose bisphosphate carboxylase small c... 178 3e-43 tr|A9NLD6|A9NLD6_PICSI Ribulose bisphosphate carboxylase small c... 178 3e-43 tr|A9NKU8|A9NKU8_PICSI Ribulose bisphosphate carboxylase small c... 178 3e-43 tr|A1YMW8|A1YMW8_BRACM Ribulose bisphosphate carboxylase small c... 177 6e-43
>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1 Length = 174
Score = 274 bits (701), Expect = 3e-72 Identities = 125/148 (84%), Positives = 139/148 (93%) Frame = +1
Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180 +GLKA+T+ APKC NPLA+SNGSR+SAMLVWKPYDNKKFETLSYLP L+++QIAKQV+YM Sbjct: 27 SGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYM 86
Query: 181 VRQNFTPCIEFDNIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEY 360 VR+ +TPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGCTDS +VLREI ECAKEY Sbjct: 87 VRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEY 146
Query: 361 PKAFIRVLGFDAKRQVQVAGFLVQKPGQ 444 P AFIRVLGFDAKRQVQVAGFLV+KP Q Sbjct: 147 PTAFIRVLGFDAKRQVQVAGFLVKKPSQ 174
>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_87740 PE=3 SV=1 Length = 179
Score = 197 bits (502), Expect = 4e-49 Identities = 92/149 (61%), Positives = 112/149 (75%), Gaps = 3/149 (2%) Frame = +1
Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180 +GLK++T+ A K +V NGSRV M VW P KFET SYLP L+ +QIAKQVD+M Sbjct: 30 SGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFM 89
Query: 181 VRQNFTPCIEFDNIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCTDSAAVLREITECA 351 ++QN PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGCTDSA VLREI EC Sbjct: 90 IQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECK 149
Query: 352 KEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438 + +P ++RVLGFD+K+QVQ+ GFLV +P Sbjct: 150 QSFPSCWVRVLGFDSKKQVQICGFLVARP 178
>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small chain (Fragment) OS=Physcomitrella patens PE=2 SV=1 Length = 214
Score = 197 bits (501), Expect = 5e-49 Identities = 91/149 (61%), Positives = 112/149 (75%), Gaps = 3/149 (2%) Frame = +1
Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180 +GLK++T+ + K +V NGSRV M VW P KFET SYLP L+ +QIAKQVDYM Sbjct: 65 SGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYM 124
Query: 181 VRQNFTPCIEFDNIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCTDSAAVLREITECA 351 ++QN PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGCTDS+ VLREI EC Sbjct: 125 IQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECK 184
Query: 352 KEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438 ++P ++RVLGFD+K+QVQ+ GFLV +P Sbjct: 185 SQFPSCWVRVLGFDSKKQVQICGFLVSRP 213
>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_221004 PE=3 SV=1 Length = 184
Score = 197 bits (501), Expect = 5e-49 Identities = 92/149 (61%), Positives = 111/149 (74%), Gaps = 3/149 (2%) Frame = +1
Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180 +GLK +T+ + K AV NGSRV M VW P KFET SYLP L+ +QIAKQVDYM Sbjct: 35 SGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYM 94
Query: 181 VRQNFTPCIEFDNIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCTDSAAVLREITECA 351 ++QN PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGCTDS+ VLREI EC Sbjct: 95 IQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECK 154
Query: 352 KEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438 ++P ++RVLGFD+K+QVQ+ GFLV +P Sbjct: 155 SQFPSCWVRVLGFDSKKQVQICGFLVSRP 183
>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_87752 PE=3 SV=1 Length = 179
Score = 197 bits (501), Expect = 5e-49 Identities = 92/149 (61%), Positives = 112/149 (75%), Gaps = 3/149 (2%) Frame = +1
Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180 +GLK++T+ A K +V NGSRV M VW P KFET SYLP L+ +QIAKQVD+M Sbjct: 30 SGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFM 89
Query: 181 VRQNFTPCIEFDNIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCTDSAAVLREITECA 351 ++QN PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGCTDSA VLREI EC Sbjct: 90 IQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECK 149
Query: 352 KEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438 + +P ++RVLGFD+K+QVQ+ GFLV +P Sbjct: 150 QSFPSCWVRVLGFDSKKQVQICGFLVARP 178
>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PprbcS1 PE=2 SV=1 Length = 184
Score = 196 bits (498), Expect = 1e-48 Identities = 91/149 (61%), Positives = 110/149 (73%), Gaps = 3/149 (2%) Frame = +1
Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180 +GLK++T+ K +V NGSRV M VW P KFET SYLP LS +QIA+QVDYM Sbjct: 35 SGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQVDYM 94
Query: 181 VRQNFTPCIEFDNIGSVYREHFHGSG---YYDGRYWVMWKLPMFGCTDSAAVLREITECA 351 ++QN PCIEFD +G+V R +F GSG YYDGRYW MWKLPMFGCTDS+ VLREI EC Sbjct: 95 IQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECK 154
Query: 352 KEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438 YP ++RVLGFD+K+QVQ+ GFLV +P Sbjct: 155 TSYPSCWVRVLGFDSKKQVQICGFLVARP 183
>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_225236 PE=3 SV=1 Length = 183
Score = 195 bits (495), Expect = 3e-48 Identities = 89/149 (59%), Positives = 112/149 (75%), Gaps = 3/149 (2%) Frame = +1
Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180 +GLK++T+ + + +V NGSRV M VW P KFET SYLP L+ ++IAKQVDYM Sbjct: 34 SGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQVDYM 93
Query: 181 VRQNFTPCIEFDNIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCTDSAAVLREITECA 351 ++QN PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGCTDS+ VLREI EC Sbjct: 94 IQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECK 153
Query: 352 KEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438 ++P ++RVLGFD+K+QVQ+ GFLV +P Sbjct: 154 TQFPSCWVRVLGFDSKKQVQICGFLVSRP 182
>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_115069 PE=3 SV=1 Length = 181
Score = 186 bits (471), Expect = 2e-45 Identities = 86/146 (58%), Positives = 103/146 (70%) Frame = +1
Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180 +GLK++T+ + K N +V NGSRV M VW P KFET SYLP LS + IAKQV+YM Sbjct: 35 SGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYM 94
Query: 181 VRQNFTPCIEFDNIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEY 360 ++Q PC+EFDN V R + GYYDGRYW MWKLPMFGC DSA VLREI EC K + Sbjct: 95 IQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTF 154
Query: 361 PKAFIRVLGFDAKRQVQVAGFLVQKP 438 P F+RVLGFD +QVQ+ GFLV +P Sbjct: 155 PGCFVRVLGFDNVKQVQICGFLVARP 180
>tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small chain OS=Picea sitchensis PE=2 SV=1 Length = 159
Score = 184 bits (467), Expect = 5e-45 Identities = 83/142 (58%), Positives = 103/142 (72%) Frame = +1
Query: 13 ASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQN 192 A+ PK N SNG RV M VW PY+N KFETLSYLP+L+ EQ+ K+V+Y++R Sbjct: 15 AAVAAPPKTSNGNGSSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNK 74
Query: 193 FTPCIEFDNIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAF 372 + PC+EFD G + R++ GYYDGRYWVMWKLPMFGCT+++ VL E+ ECAK YPKAF Sbjct: 75 WVPCLEFDEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAF 134
Query: 373 IRVLGFDAKRQVQVAGFLVQKP 438 IRV+GFD RQVQ F+V KP Sbjct: 135 IRVIGFDNVRQVQCISFIVHKP 156
>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_146969 PE=3 SV=1 Length = 181
Score = 183 bits (465), Expect = 8e-45 Identities = 86/146 (58%), Positives = 102/146 (69%) Frame = +1
Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180 +GLK+ST+ + K + +V NGSRV M VW P KFET SYLP LS + IAKQVDYM Sbjct: 35 SGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQVDYM 94
Query: 181 VRQNFTPCIEFDNIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEY 360 ++Q PC+EFDN V R + GYYDGRYW MWKLPMFGC D A VLREI EC K + Sbjct: 95 IQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECKKTF 154
Query: 361 PKAFIRVLGFDAKRQVQVAGFLVQKP 438 P F+RVLGFD +QVQ+ GFLV +P Sbjct: 155 PGCFVRVLGFDNVKQVQICGFLVARP 180
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