DK947635
Clone id YMU02A01NGRL0016_I11
Library
Length 718
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_I11. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCGGGCCTCAAGGCCTCCACCATCGTCGCGCCCAAGTGTGGCAATCCCCTCGCCGTTTCC
AATGGCAGCCGTGTCAGCGCCATGCTGGTGTGGAAGCCGTACGACAACAAGAAGTTCGAG
ACTCTGTCATATCTGCCGCAGCTGAGTAGCGAGCAGATAGCAAAGCAGGTGGACTACATG
GTGCGACAGAACTTTACTCCCTGCATCGAGTTCGACAACATTGGGAGCGTGTACCGGGAG
CACTTCCACGGGAGCGGGTACTACGATGGGAGGTACTGGGTGATGTGGAAGCTGCCCATG
TTTGGCTGCACCGACTCCGCCGCCGTGCTGCGCGAGATCACGGAGTGCGCCAAGGAGTAC
CCCAAGGCATTCATCCGGGTGCTCGGCTTCGATGCCAAGCGGCAAGTTCAGGTTGCTGGC
TTCCTTGTCCAGAAGCCCGGCCAGTGAAGTAAATTTTTTCTGCTGCCTCTGAATTTCCCC
AGCCCATATATCTAATTTGTTGTGAGCTATCATGAAAGCCTGTCTGTATAGAAACCTGCT
AACTTGGGCGGGGATTCTCTAAATTCTGAGCCCCGGGGGCCCTTGGAAACTCCTTGCCTG
GTAAATCCAAAACCCAACATCCTGAACTTTGCAGGCCCTGCTGAATGAAAGAAAAGGGGG
ATCCTGGTTATTCCTGGGTTTCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q96542
Definition sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa
Align length 141
Score (bit) 182.0
E-value 1.0e-45
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947635|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_I11, 5'
(685 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 182 1e-45
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 180 6e-45
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 179 9e-45
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 179 1e-44
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 178 2e-44
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 178 2e-44
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 177 4e-44
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 177 4e-44
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 177 5e-44
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha... 177 5e-44
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai... 175 2e-43
sp|P27985|RBS2_BRANA Ribulose bisphosphate carboxylase small cha... 175 2e-43
sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small cha... 174 4e-43
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 174 5e-43
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 173 9e-43
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai... 173 9e-43
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha... 172 1e-42
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 172 1e-42
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 172 2e-42
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 172 2e-42
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai... 172 2e-42
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 172 2e-42
sp|Q39745|RBS3_FLAPR Ribulose bisphosphate carboxylase small cha... 171 3e-42
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha... 171 3e-42
sp|Q39749|RBS7_FLAPR Ribulose bisphosphate carboxylase small cha... 171 4e-42
sp|Q39747|RBS5_FLAPR Ribulose bisphosphate carboxylase small cha... 171 4e-42
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 170 7e-42
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 170 7e-42
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 169 1e-41
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 169 1e-41

>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
Length = 182

Score = 182 bits (462), Expect = 1e-45
Identities = 86/141 (60%), Positives = 101/141 (71%), Gaps = 3/141 (2%)
Frame = +1

Query: 25 VAPKCGNPLA--VSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFT 198
V K N + SNG RV M VW P KKFETLSYLP LSSEQ+AK+VDY++R+N
Sbjct: 39 VTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLI 98

Query: 199 PCIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFI 375
PC+EF+ G VYREH GYYDGRYW MWKLPMFGC DS+ VL+E+ EC K YP AFI
Sbjct: 99 PCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFI 158

Query: 376 RVLGFDAKRQVQVAGFLVQKP 438
R++GFD KRQVQ+ F+ KP
Sbjct: 159 RIIGFDNKRQVQIISFIAYKP 179


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181

Score = 180 bits (457), Expect = 6e-45
Identities = 87/150 (58%), Positives = 105/150 (70%), Gaps = 5/150 (3%)
Frame = +1

Query: 4 GLKASTI--VAPKCGNPLAV--SNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQV 171
GLK++ V K N + SNG RV M VW P KK+ETLSYLP LS E ++K++
Sbjct: 28 GLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEI 87

Query: 172 DYMVRQNFTPCIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITEC 348
DY++R + PC+EF+ G VYREH H GYYDGRYW MWKLPMFGCTDSA V++E+ EC
Sbjct: 88 DYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGEC 147

Query: 349 AKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438
KEYP AFIRV+GFD RQVQ F+V KP
Sbjct: 148 KKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small chain
2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B
PE=2 SV=2
Length = 181

Score = 179 bits (455), Expect = 9e-45
Identities = 88/150 (58%), Positives = 105/150 (70%), Gaps = 5/150 (3%)
Frame = +1

Query: 4 GLKASTI--VAPKCGNPLA--VSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQV 171
GLK+S V K N + SNG RVS M VW P KKFETLSYLP LS ++AK+V
Sbjct: 26 GLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEV 85

Query: 172 DYMVRQNFTPCIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITEC 348
DY++R + PC+EF+ G VYREH + GYYDGRYW MWKLP+FGCTDSA VL+E+ EC
Sbjct: 86 DYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEEC 145

Query: 349 AKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438
KEYP AFIR++GFD RQVQ F+ KP
Sbjct: 146 KKEYPGAFIRIIGFDNTRQVQCISFIAYKP 175


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
PE=1 SV=2
Length = 180

Score = 179 bits (454), Expect = 1e-44
Identities = 85/150 (56%), Positives = 104/150 (69%), Gaps = 5/150 (3%)
Frame = +1

Query: 4 GLKASTI--VAPKCGNPLA--VSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQV 171
GLK+S K N + SNG RV+ M VW P KKFETLSYLP L+ ++AK+V
Sbjct: 26 GLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAKEV 85

Query: 172 DYMVRQNFTPCIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITEC 348
DY++R + PC+EF+ G VYREH + GYYDGRYW MWKLP+FGCTDSA VL+E+ EC
Sbjct: 86 DYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEEC 145

Query: 349 AKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438
KEYP AFIR++GFD RQVQ F+ KP
Sbjct: 146 KKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175


>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1
Length = 189

Score = 178 bits (452), Expect = 2e-44
Identities = 78/127 (61%), Positives = 98/127 (77%)
Frame = +1

Query: 58 SNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFDNIGSVYR 237
SNGSRV M VW PY NKKFETLSYLP+L+ EQ+ K+V+Y+++ + PC+EF+ G + R
Sbjct: 60 SNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKR 119

Query: 238 EHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQVA 417
+ + GYYDGRYWVMWKLPMFGCT+++ VL E+ ECAK YP AFIRV+GFD RQVQ
Sbjct: 120 VYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCI 179

Query: 418 GFLVQKP 438
F+V KP
Sbjct: 180 SFIVHKP 186


>sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small chain
1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B
PE=1 SV=1
Length = 181

Score = 178 bits (452), Expect = 2e-44
Identities = 87/150 (58%), Positives = 105/150 (70%), Gaps = 5/150 (3%)
Frame = +1

Query: 4 GLKASTI--VAPKCGNPLA--VSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQV 171
GLK+S V K N + SNG RVS M VW P KKFETLSYLP L+ ++AK+V
Sbjct: 26 GLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLTDVELAKEV 85

Query: 172 DYMVRQNFTPCIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITEC 348
DY++R + PC+EF+ G VYREH + GYYDGRYW MWKLP+FGCTDSA VL+E+ EC
Sbjct: 86 DYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEEC 145

Query: 349 AKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438
KEYP AFIR++GFD RQVQ F+ KP
Sbjct: 146 KKEYPGAFIRIIGFDNTRQVQCISFIAYKP 175


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
Length = 171

Score = 177 bits (450), Expect = 4e-44
Identities = 78/127 (61%), Positives = 97/127 (76%)
Frame = +1

Query: 58 SNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFDNIGSVYR 237
SNG RV M VW P+ N KFETLSYLP L+ EQ+ K+V+Y++R + PC+EFD GS+ R
Sbjct: 44 SNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISR 103

Query: 238 EHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQVA 417
++ GYYDGRYWVMWKLPMFGCT+++ V+ E+ ECAK YPKAFIRV+GFD RQVQ
Sbjct: 104 KYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCI 163

Query: 418 GFLVQKP 438
F+V KP
Sbjct: 164 SFIVHKP 170


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
Length = 180

Score = 177 bits (450), Expect = 4e-44
Identities = 88/147 (59%), Positives = 103/147 (70%), Gaps = 1/147 (0%)
Frame = +1

Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180
AGLKA +NGSRVS M VW+PY+N KFETLSYLP LS + +AKQ+DY+
Sbjct: 32 AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91

Query: 181 VRQNFTPCIEFDNIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEY 360
++ + PCIEFD G+V RE GYYDGRYW MWKLPMFGCTDSA+VLREI EC K Y
Sbjct: 92 IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLY 151

Query: 361 -PKAFIRVLGFDAKRQVQVAGFLVQKP 438
K +IR LGFD RQVQ A F+V +P
Sbjct: 152 GKKCYIRCLGFDNTRQVQCASFIVHQP 178


>sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small chain
3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B
PE=1 SV=2
Length = 181

Score = 177 bits (449), Expect = 5e-44
Identities = 81/128 (63%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
Frame = +1

Query: 58 SNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQNFTPCIEFD-NIGSVY 234
SNG RVS M VW P KKFETLSYLP LS ++AK+VDY++R + PC+EF+ G VY
Sbjct: 48 SNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVY 107

Query: 235 REHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAFIRVLGFDAKRQVQV 414
REH + GYYDGRYW MWKLP+FGCTDSA VL+E+ EC KEYP AFIR++GFD RQVQ
Sbjct: 108 REHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQC 167

Query: 415 AGFLVQKP 438
F+ KP
Sbjct: 168 ISFIAYKP 175


>sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Brassica napus GN=RBCS PE=2 SV=2
Length = 181

Score = 177 bits (449), Expect = 5e-44
Identities = 86/150 (57%), Positives = 104/150 (69%), Gaps = 5/150 (3%)
Frame = +1

Query: 4 GLKASTI--VAPKCGNPLA--VSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQV 171
GLK+S+ V K N + VSNG RVS M VW P KKFETLSYLP L+ ++ K+V
Sbjct: 26 GLKSSSAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKKKFETLSYLPDLTEVELGKEV 85

Query: 172 DYMVRQNFTPCIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITEC 348
DY++R + PC+EF+ G VYREH GYYDGRYW MWKLP+FGCTDSA VL+E+ EC
Sbjct: 86 DYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQEC 145

Query: 349 AKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438
EYP AFIR++GFD RQVQ F+ KP
Sbjct: 146 KTEYPNAFIRIIGFDNNRQVQCISFIAYKP 175


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 148
Score (bit) 274.0
E-value 3.0e-72
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947635|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_I11, 5'
(685 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 274 3e-72
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 197 4e-49
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 197 5e-49
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 197 5e-49
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 197 5e-49
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 196 1e-48
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 195 3e-48
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 186 2e-45
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c... 184 5e-45
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 183 8e-45
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 183 1e-44
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 182 1e-44
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 182 2e-44
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 181 5e-44
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c... 180 7e-44
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c... 180 7e-44
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 180 7e-44
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c... 179 1e-43
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c... 179 1e-43
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c... 179 1e-43
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c... 179 1e-43
tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c... 179 1e-43
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 178 3e-43
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c... 178 3e-43
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c... 178 3e-43
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 178 3e-43
tr|A9NM29|A9NM29_PICSI Ribulose bisphosphate carboxylase small c... 178 3e-43
tr|A9NLD6|A9NLD6_PICSI Ribulose bisphosphate carboxylase small c... 178 3e-43
tr|A9NKU8|A9NKU8_PICSI Ribulose bisphosphate carboxylase small c... 178 3e-43
tr|A1YMW8|A1YMW8_BRACM Ribulose bisphosphate carboxylase small c... 177 6e-43

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 274 bits (701), Expect = 3e-72
Identities = 125/148 (84%), Positives = 139/148 (93%)
Frame = +1

Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180
+GLKA+T+ APKC NPLA+SNGSR+SAMLVWKPYDNKKFETLSYLP L+++QIAKQV+YM
Sbjct: 27 SGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYM 86

Query: 181 VRQNFTPCIEFDNIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEY 360
VR+ +TPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGCTDS +VLREI ECAKEY
Sbjct: 87 VRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEY 146

Query: 361 PKAFIRVLGFDAKRQVQVAGFLVQKPGQ 444
P AFIRVLGFDAKRQVQVAGFLV+KP Q
Sbjct: 147 PTAFIRVLGFDAKRQVQVAGFLVKKPSQ 174


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179

Score = 197 bits (502), Expect = 4e-49
Identities = 92/149 (61%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
Frame = +1

Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180
+GLK++T+ A K +V NGSRV M VW P KFET SYLP L+ +QIAKQVD+M
Sbjct: 30 SGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFM 89

Query: 181 VRQNFTPCIEFDNIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCTDSAAVLREITECA 351
++QN PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGCTDSA VLREI EC
Sbjct: 90 IQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECK 149

Query: 352 KEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438
+ +P ++RVLGFD+K+QVQ+ GFLV +P
Sbjct: 150 QSFPSCWVRVLGFDSKKQVQICGFLVARP 178


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214

Score = 197 bits (501), Expect = 5e-49
Identities = 91/149 (61%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
Frame = +1

Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180
+GLK++T+ + K +V NGSRV M VW P KFET SYLP L+ +QIAKQVDYM
Sbjct: 65 SGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYM 124

Query: 181 VRQNFTPCIEFDNIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCTDSAAVLREITECA 351
++QN PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGCTDS+ VLREI EC
Sbjct: 125 IQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECK 184

Query: 352 KEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438
++P ++RVLGFD+K+QVQ+ GFLV +P
Sbjct: 185 SQFPSCWVRVLGFDSKKQVQICGFLVSRP 213


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184

Score = 197 bits (501), Expect = 5e-49
Identities = 92/149 (61%), Positives = 111/149 (74%), Gaps = 3/149 (2%)
Frame = +1

Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180
+GLK +T+ + K AV NGSRV M VW P KFET SYLP L+ +QIAKQVDYM
Sbjct: 35 SGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYM 94

Query: 181 VRQNFTPCIEFDNIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCTDSAAVLREITECA 351
++QN PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGCTDS+ VLREI EC
Sbjct: 95 IQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECK 154

Query: 352 KEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438
++P ++RVLGFD+K+QVQ+ GFLV +P
Sbjct: 155 SQFPSCWVRVLGFDSKKQVQICGFLVSRP 183


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179

Score = 197 bits (501), Expect = 5e-49
Identities = 92/149 (61%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
Frame = +1

Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180
+GLK++T+ A K +V NGSRV M VW P KFET SYLP L+ +QIAKQVD+M
Sbjct: 30 SGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFM 89

Query: 181 VRQNFTPCIEFDNIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCTDSAAVLREITECA 351
++QN PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGCTDSA VLREI EC
Sbjct: 90 IQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECK 149

Query: 352 KEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438
+ +P ++RVLGFD+K+QVQ+ GFLV +P
Sbjct: 150 QSFPSCWVRVLGFDSKKQVQICGFLVARP 178


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
PE=2 SV=1
Length = 184

Score = 196 bits (498), Expect = 1e-48
Identities = 91/149 (61%), Positives = 110/149 (73%), Gaps = 3/149 (2%)
Frame = +1

Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180
+GLK++T+ K +V NGSRV M VW P KFET SYLP LS +QIA+QVDYM
Sbjct: 35 SGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQVDYM 94

Query: 181 VRQNFTPCIEFDNIGSVYREHFHGSG---YYDGRYWVMWKLPMFGCTDSAAVLREITECA 351
++QN PCIEFD +G+V R +F GSG YYDGRYW MWKLPMFGCTDS+ VLREI EC
Sbjct: 95 IQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECK 154

Query: 352 KEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438
YP ++RVLGFD+K+QVQ+ GFLV +P
Sbjct: 155 TSYPSCWVRVLGFDSKKQVQICGFLVARP 183


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_225236 PE=3 SV=1
Length = 183

Score = 195 bits (495), Expect = 3e-48
Identities = 89/149 (59%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
Frame = +1

Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180
+GLK++T+ + + +V NGSRV M VW P KFET SYLP L+ ++IAKQVDYM
Sbjct: 34 SGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQVDYM 93

Query: 181 VRQNFTPCIEFDNIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCTDSAAVLREITECA 351
++QN PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGCTDS+ VLREI EC
Sbjct: 94 IQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECK 153

Query: 352 KEYPKAFIRVLGFDAKRQVQVAGFLVQKP 438
++P ++RVLGFD+K+QVQ+ GFLV +P
Sbjct: 154 TQFPSCWVRVLGFDSKKQVQICGFLVSRP 182


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_115069 PE=3 SV=1
Length = 181

Score = 186 bits (471), Expect = 2e-45
Identities = 86/146 (58%), Positives = 103/146 (70%)
Frame = +1

Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180
+GLK++T+ + K N +V NGSRV M VW P KFET SYLP LS + IAKQV+YM
Sbjct: 35 SGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYM 94

Query: 181 VRQNFTPCIEFDNIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEY 360
++Q PC+EFDN V R + GYYDGRYW MWKLPMFGC DSA VLREI EC K +
Sbjct: 95 IQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTF 154

Query: 361 PKAFIRVLGFDAKRQVQVAGFLVQKP 438
P F+RVLGFD +QVQ+ GFLV +P
Sbjct: 155 PGCFVRVLGFDNVKQVQICGFLVARP 180


>tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small
chain OS=Picea sitchensis PE=2 SV=1
Length = 159

Score = 184 bits (467), Expect = 5e-45
Identities = 83/142 (58%), Positives = 103/142 (72%)
Frame = +1

Query: 13 ASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYMVRQN 192
A+ PK N SNG RV M VW PY+N KFETLSYLP+L+ EQ+ K+V+Y++R
Sbjct: 15 AAVAAPPKTSNGNGSSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNK 74

Query: 193 FTPCIEFDNIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEYPKAF 372
+ PC+EFD G + R++ GYYDGRYWVMWKLPMFGCT+++ VL E+ ECAK YPKAF
Sbjct: 75 WVPCLEFDEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAF 134

Query: 373 IRVLGFDAKRQVQVAGFLVQKP 438
IRV+GFD RQVQ F+V KP
Sbjct: 135 IRVIGFDNVRQVQCISFIVHKP 156


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_146969 PE=3 SV=1
Length = 181

Score = 183 bits (465), Expect = 8e-45
Identities = 86/146 (58%), Positives = 102/146 (69%)
Frame = +1

Query: 1 AGLKASTIVAPKCGNPLAVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAKQVDYM 180
+GLK+ST+ + K + +V NGSRV M VW P KFET SYLP LS + IAKQVDYM
Sbjct: 35 SGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQVDYM 94

Query: 181 VRQNFTPCIEFDNIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSAAVLREITECAKEY 360
++Q PC+EFDN V R + GYYDGRYW MWKLPMFGC D A VLREI EC K +
Sbjct: 95 IQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECKKTF 154

Query: 361 PKAFIRVLGFDAKRQVQVAGFLVQKP 438
P F+RVLGFD +QVQ+ GFLV +P
Sbjct: 155 PGCFVRVLGFDNVKQVQICGFLVARP 180