DK947636 |
Clone id |
YMU02A01NGRL0016_I12 |
Library |
YMU02 |
Length |
538 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_I12. 5' end sequence. |
Accession |
DK947636 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL500Contig1 |
Sequence |
GAAAGCTCCATTGTAAAGCAGCACTGTCTTCTCTCCGCGCCAGGCTTCCAGGTCGGCCAT GGGGCACGCTGCGGTCTGGAATTCCCACCCCAAGAAGTACGGCGCAGGCTCCCGCGCCTG TCGTGTTTGCGGAAATGTTCATGGGCTTGTACGGAAGTACAATCTGATGTGCTGTAGACA GTGCTTCCGCATCTATTCCAAGGACATTGGCTTTGTGAAGTATCGCTAGGTTAGTTTAAT GGACGTACGCTCGGCTGCAACCACCTTGGAATCTTTGGCAAAGGTGGTTTTCAACATGTG GAAGGAGTGTATGGACATGTAGTTTCAATTATGATTAATAGAGTTTTATTGTTCACTATG AAACGATCTCATGGGACCAAAACTTTTTTTCCATGGATTCTCCTCTTTTCTTTCTGGGAT GCTTCCGGCCCAGTGCTGTGTGTAGGGGTGGACGCCTGGTTGGTTTGTTTTGAGTATTTG CAATGTGAAACTAAGCTACGGATCTACTTGTTTCACATAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5I7K3 |
Definition |
sp|Q5I7K3|RS29_WHEAT 40S ribosomal protein S29 OS=Triticum aestivum |
Align length |
56 |
Score (bit) |
108.0 |
E-value |
1.0e-23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NJU6 |
Definition |
tr|A9NJU6|A9NJU6_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
56 |
Score (bit) |
112.0 |
E-value |
1.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947636|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0016_I12, 5' (518 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NJU6|A9NJU6_PICSI Putative uncharacterized protein OS=Picea... 112 1e-23 tr|Q7XZX4|Q7XZX4_ORYSJ 40S ribosomal protein S29, putative, expr... 107 5e-22 tr|A2ZG71|A2ZG71_ORYSI Putative uncharacterized protein OS=Oryza... 107 5e-22 tr|B6SMC7|B6SMC7_MAIZE 40S ribosomal protein S29 OS=Zea mays PE=... 104 2e-21 tr|A9P0U9|A9P0U9_PICSI Putative uncharacterized protein OS=Picea... 104 2e-21 tr|B6U9V0|B6U9V0_MAIZE 40S ribosomal protein S29 OS=Zea mays PE=... 104 3e-21 tr|A9P9S8|A9P9S8_POPTR Putative uncharacterized protein OS=Popul... 104 3e-21 tr|B6T147|B6T147_MAIZE 40S ribosomal protein S29 OS=Zea mays PE=... 103 7e-21 tr|A9PAM2|A9PAM2_POPTR Putative uncharacterized protein OS=Popul... 103 7e-21 tr|A9RGD7|A9RGD7_PHYPA Predicted protein OS=Physcomitrella paten... 102 9e-21 tr|Q2QQ34|Q2QQ34_ORYSJ 40S ribosomal protein S29, putative, expr... 102 1e-20 tr|Q10E81|Q10E81_ORYSJ Ribosomal protein S14p/S29e containing pr... 102 1e-20 tr|B8BM34|B8BM34_ORYSI Putative uncharacterized protein OS=Oryza... 102 1e-20 tr|B8BM32|B8BM32_ORYSI Putative uncharacterized protein OS=Oryza... 102 1e-20 tr|B8AKJ9|B8AKJ9_ORYSI Putative uncharacterized protein OS=Oryza... 102 1e-20 tr|A3AN48|A3AN48_ORYSJ Putative uncharacterized protein OS=Oryza... 102 1e-20 tr|A7PDU6|A7PDU6_VITVI Chromosome chr11 scaffold_13, whole genom... 102 1e-20 tr|B6UE01|B6UE01_MAIZE 40S ribosomal protein S29 OS=Zea mays PE=... 100 3e-20 tr|Q67XK4|Q67XK4_ARATH Ribosomal S29 subunit OS=Arabidopsis thal... 100 6e-20 tr|A9V6U9|A9V6U9_MONBE Predicted protein OS=Monosiga brevicollis... 99 1e-19 tr|A9SH93|A9SH93_PHYPA Predicted protein OS=Physcomitrella paten... 98 2e-19 tr|A9S9B9|A9S9B9_PHYPA Predicted protein OS=Physcomitrella paten... 98 2e-19 tr|Q209Q3|Q209Q3_9CHLO Ribosomal protein S29 subunit OS=Chlamydo... 96 1e-18 tr|B6U2I7|B6U2I7_MAIZE 40S ribosomal protein S29 OS=Zea mays PE=... 92 1e-17 tr|Q5BTL1|Q5BTL1_SCHJA Ribosomal protein S29 OS=Schistosoma japo... 91 4e-17 tr|Q4KTB2|Q4KTB2_SUBDO S29 OS=Suberites domuncula PE=4 SV=1 91 4e-17 tr|B0Z9R4|B0Z9R4_9BILA Ribosomal protein rps29 OS=Lineus viridis... 90 6e-17 tr|A8JIE5|A8JIE5_CHLRE Ribosomal protein S29 OS=Chlamydomonas re... 89 1e-16 tr|Q6Q419|Q6Q419_DANRE Ribosomal protein S29 OS=Danio rerio GN=r... 89 1e-16 tr|A9SA21|A9SA21_PHYPA Predicted protein OS=Physcomitrella paten... 89 2e-16
>tr|A9NJU6|A9NJU6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 56
Score = 112 bits (280), Expect = 1e-23 Identities = 48/56 (85%), Positives = 50/56 (89%) Frame = +2
Query: 59 MGHAAVWNSHPKKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYSKDIGFVKYR 226 M H+AVWNSHPKKYG GSRACRVCGN HGL+RKY L CCRQCFR YSKDIGFVKYR Sbjct: 1 MPHSAVWNSHPKKYGPGSRACRVCGNPHGLIRKYGLNCCRQCFRTYSKDIGFVKYR 56
>tr|Q7XZX4|Q7XZX4_ORYSJ 40S ribosomal protein S29, putative, expressed OS=Oryza sativa subsp. japonica GN=OSJNBb0094O03.12 PE=4 SV=1 Length = 56
Score = 107 bits (266), Expect = 5e-22 Identities = 44/56 (78%), Positives = 48/56 (85%) Frame = +2
Query: 59 MGHAAVWNSHPKKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYSKDIGFVKYR 226 MGH+ VWNSHPK YG GSR CRVCGN HGL+RKY LMCCRQCFR +KDIGF+KYR Sbjct: 1 MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56
>tr|A2ZG71|A2ZG71_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36775 PE=4 SV=1 Length = 56
Score = 107 bits (266), Expect = 5e-22 Identities = 44/56 (78%), Positives = 48/56 (85%) Frame = +2
Query: 59 MGHAAVWNSHPKKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYSKDIGFVKYR 226 MGH+ VWNSHPK YG GSR CRVCGN HGL+RKY LMCCRQCFR +KDIGF+KYR Sbjct: 1 MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56
>tr|B6SMC7|B6SMC7_MAIZE 40S ribosomal protein S29 OS=Zea mays PE=4 SV=1 Length = 56
Score = 104 bits (260), Expect = 2e-21 Identities = 43/56 (76%), Positives = 47/56 (83%) Frame = +2
Query: 59 MGHAAVWNSHPKKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYSKDIGFVKYR 226 MGH+ VWNSHPK YG GSR CRVC N HGL+RKY LMCCRQCFR +KDIGF+KYR Sbjct: 1 MGHSNVWNSHPKNYGPGSRVCRVCANPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56
>tr|A9P0U9|A9P0U9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 56
Score = 104 bits (260), Expect = 2e-21 Identities = 43/56 (76%), Positives = 48/56 (85%) Frame = +2
Query: 59 MGHAAVWNSHPKKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYSKDIGFVKYR 226 MGH+ V+NSHPK YG GSR CRVCGN HGL+RKY + CCRQCFR Y+KDIGFVKYR Sbjct: 1 MGHSTVYNSHPKSYGPGSRTCRVCGNSHGLIRKYGINCCRQCFRSYAKDIGFVKYR 56
>tr|B6U9V0|B6U9V0_MAIZE 40S ribosomal protein S29 OS=Zea mays PE=4 SV=1 Length = 56
Score = 104 bits (259), Expect = 3e-21 Identities = 43/56 (76%), Positives = 48/56 (85%) Frame = +2
Query: 59 MGHAAVWNSHPKKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYSKDIGFVKYR 226 MGH+ VWNSHPKKYG GSR CRVCGN HGL+RKY L CCRQCFR +K+IGF+KYR Sbjct: 1 MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56
>tr|A9P9S8|A9P9S8_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 56
Score = 104 bits (259), Expect = 3e-21 Identities = 41/56 (73%), Positives = 48/56 (85%) Frame = +2
Query: 59 MGHAAVWNSHPKKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYSKDIGFVKYR 226 MGH+ +WNSHPK YG GSR CRVCGN HG++RKY LMCCRQCFR +K+IGF+KYR Sbjct: 1 MGHSNIWNSHPKNYGPGSRTCRVCGNPHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 56
>tr|B6T147|B6T147_MAIZE 40S ribosomal protein S29 OS=Zea mays PE=4 SV=1 Length = 99
Score = 103 bits (256), Expect = 7e-21 Identities = 42/56 (75%), Positives = 47/56 (83%) Frame = +2
Query: 59 MGHAAVWNSHPKKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYSKDIGFVKYR 226 MGH+ VWNSHPK YG GSR C+VC N HGL+RKY LMCCRQCFR +KDIGF+KYR Sbjct: 1 MGHSNVWNSHPKNYGPGSRVCQVCANPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56
>tr|A9PAM2|A9PAM2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 56
Score = 103 bits (256), Expect = 7e-21 Identities = 40/56 (71%), Positives = 48/56 (85%) Frame = +2
Query: 59 MGHAAVWNSHPKKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYSKDIGFVKYR 226 MGH+ +WNSHP+ YG GSR CRVCGN HG++RKY LMCCRQCFR +K+IGF+KYR Sbjct: 1 MGHSNIWNSHPRNYGPGSRTCRVCGNPHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 56
>tr|A9RGD7|A9RGD7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_202119 PE=4 SV=1 Length = 56
Score = 102 bits (255), Expect = 9e-21 Identities = 44/56 (78%), Positives = 47/56 (83%) Frame = +2
Query: 59 MGHAAVWNSHPKKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYSKDIGFVKYR 226 MGH AVWNSHPK YG GSR CRVCGN G++RKY + CRQCFRIYSKDIGFVKYR Sbjct: 1 MGHEAVWNSHPKGYGPGSRTCRVCGNSCGMIRKYGINTCRQCFRIYSKDIGFVKYR 56
|