DK947680 |
Clone id |
YMU02A01NGRL0016_K17 |
Library |
YMU02 |
Length |
589 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_K17. 5' end sequence. |
Accession |
DK947680 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL670Contig1 |
Sequence |
ACAGCATCGTCTTCCTATTCCAACTCTACCTTTATTAGTGGTGTAGAATTACACGGAGGC TCTGCTGCTGCTTCTGTTGGGGCTCCCTCTTTCAAACCAAGAAGGCAAGCCAAGTGTAAT TGAGAGAGCTTACATAAGGGAGAAGGATGGAGTACTTTCCAGGACCGGGGCGGAATCAAC TCTTTGTGCCCGGGCCCGTCAATGTCCCAGAGCAAGTGCTGCGCGCAATGAACCGCAATA ATGAGGATTACCGCTCTCCAGCCATGCCCACTCTATCCAAGTCGGTCCTCGAGGATGTCA GGCGCATATTCAAAACAACTGGGGCTACCTCCTTCATCATCCCAACCACAGGGACTGGGG CATGGGAAAGTGCATTGACAAACACACTGTCCCCAAGGGACAAGATCTTGACGTTTCGGC TCGGACAATTTAGTCTCTTGTGGGTAGACCAGATGCAGAGGCTCAACTTTGATGTGGACG TGGTGGATGTGGAATGGGGAGCTGGAATCGACCTCGGTGTGCTGCGAGACAAGCTTATTG CTGATTCTCACCATCAAATTAAAGCTGTGTGTGTGGTCCACAATGAGAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q56YA5 |
Definition |
sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana |
Align length |
147 |
Score (bit) |
223.0 |
E-value |
4.0e-58 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947680|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0016_K17, 5' (589 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arab... 223 4e-58 sp|P55819|SGAA_METEX Serine--glyoxylate aminotransferase OS=Meth... 159 7e-39 sp|O08374|SGAA_HYPME Serine--glyoxylate aminotransferase OS=Hyph... 144 3e-34 sp|P16421|DHSS_ANACY Soluble hydrogenase 42 kDa subunit OS=Anaba... 83 1e-15 sp|Q58369|Y959_METJA Uncharacterized aminotransferase MJ0959 OS=... 72 2e-12 sp|P14776|DHSS_SYNP1 Soluble hydrogenase, small subunit OS=Synec... 59 2e-08 sp|O32148|PUCG_BACSU Purine catabolism protein pucG OS=Bacillus ... 58 3e-08 sp|Q54GT6|SPYA_DICDI Serine--pyruvate aminotransferase OS=Dictyo... 45 2e-04 sp|P21549|SPYA_HUMAN Serine--pyruvate aminotransferase OS=Homo s... 45 3e-04 sp|Q9KLY7|PHNW_VIBCH 2-aminoethylphosphonate--pyruvate transamin... 41 0.004 sp|A5F049|PHNW_VIBC3 2-aminoethylphosphonate--pyruvate transamin... 41 0.004 sp|P31030|SPYA_RABIT Serine--pyruvate aminotransferase OS=Orycto... 38 0.033 sp|P84187|SGAT_MAIZE Serine--glyoxylate aminotransferase (Fragme... 35 0.21 sp|A9MWZ9|PHNW_SALPB 2-aminoethylphosphonate--pyruvate transamin... 35 0.21 sp|P74557|Y1464_SYNY3 UPF0026 protein slr1464 OS=Synechocystis s... 35 0.28 sp|P84188|SGAT_WHEAT Serine--glyoxylate aminotransferase (Fragme... 34 0.62 sp|P96060|PHNW_SALTY 2-aminoethylphosphonate--pyruvate transamin... 34 0.62 sp|Q57SD3|PHNW_SALCH 2-aminoethylphosphonate--pyruvate transamin... 34 0.62 sp|O25436|Y736_HELPY Uncharacterized aminotransferase HP_0736 OS... 33 0.81 sp|Q9ZLA7|Y736_HELPJ Uncharacterized aminotransferase jhp_0673 O... 33 0.81 sp|Q7XJR9|CDPKG_ARATH Calcium-dependent protein kinase 16 OS=Ara... 33 1.1 sp|Q5PFR0|PHNW_SALPA 2-aminoethylphosphonate--pyruvate transamin... 32 1.8 sp|Q5R8J0|TPA_PONAB Tissue-type plasminogen activator OS=Pongo a... 32 1.8 sp|P00750|TPA_HUMAN Tissue-type plasminogen activator OS=Homo sa... 32 1.8 sp|Q8Z8W6|PHNW_SALTI 2-aminoethylphosphonate--pyruvate transamin... 32 2.3 sp|Q7SZL5|MTUS1_XENLA Mitochondrial tumor suppressor 1 homolog O... 32 2.3 sp|P0A576|HEMH_MYCTU Ferrochelatase OS=Mycobacterium tuberculosi... 32 2.3 sp|A5U2I9|HEMH_MYCTA Ferrochelatase OS=Mycobacterium tuberculosi... 32 2.3 sp|A1KIS5|HEMH_MYCBP Ferrochelatase OS=Mycobacterium bovis (stra... 32 2.3 sp|P0A577|HEMH_MYCBO Ferrochelatase OS=Mycobacterium bovis GN=he... 32 2.3
>sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2 Length = 401
Score = 223 bits (569), Expect = 4e-58 Identities = 101/147 (68%), Positives = 125/147 (85%) Frame = +3
Query: 147 MEYFPGPGRNQLFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVRRIFKTTGA 326 M+Y GPGR+ LFVPGPVN+PE V+RAMNRNNEDYRSPA+P L+K++LEDV++IFKTT Sbjct: 1 MDYMYGPGRHHLFVPGPVNIPEPVIRAMNRNNEDYRSPAIPALTKTLLEDVKKIFKTTSG 60
Query: 327 TSFIIPTTGTGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAG 506 T F+ PTTGTGAWESALTNTLSP D+I++F +GQFSLLW+DQ +RLNF+VDVV+ +WG G Sbjct: 61 TPFLFPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQKRLNFNVDVVESDWGQG 120
Query: 507 IDLGVLRDKLIADSHHQIKAVCVVHNE 587 +L VL KL D +H IKA+C+VHNE Sbjct: 121 ANLQVLASKLSQDENHTIKAICIVHNE 147
>sp|P55819|SGAA_METEX Serine--glyoxylate aminotransferase OS=Methylobacterium extorquens GN=sgaA PE=3 SV=1 Length = 379
Score = 159 bits (403), Expect = 7e-39 Identities = 75/141 (53%), Positives = 99/141 (70%) Frame = +3
Query: 165 PGRNQLFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVRRIFKTTGATSFIIP 344 PGRN LFVPGP N+P++V+RAM +ED+RS P+L+K + ED +++F +T T F+ P Sbjct: 2 PGRNHLFVPGPTNIPDRVMRAMMVQSEDHRSVDFPSLTKPLFEDTKKVFGSTEGTIFLFP 61
Query: 345 TTGTGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGIDLGVL 524 +GTG WESAL+NTL+ DK+L R GQFS LW+D QRL DV V + EWG G + Sbjct: 62 ASGTGIWESALSNTLARGDKVLAARFGQFSHLWIDMAQRLGLDVVVQEEEWGTGAKPEKI 121
Query: 525 RDKLIADSHHQIKAVCVVHNE 587 + L AD +H+IKAV VVHNE Sbjct: 122 EEALRADKNHEIKAVMVVHNE 142
>sp|O08374|SGAA_HYPME Serine--glyoxylate aminotransferase OS=Hyphomicrobium methylovorum GN=sgaA PE=3 SV=2 Length = 405
Score = 144 bits (363), Expect = 3e-34 Identities = 69/136 (50%), Positives = 88/136 (64%) Frame = +3
Query: 180 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVRRIFKTTGATSFIIPTTGTG 359 LF+PGP N+P+ V AMN ED RSP P + + ED+++ FK FI P++GTG Sbjct: 7 LFIPGPTNIPDAVRMAMNIPMEDMRSPEFPKFTLPLFEDLKKAFKMKDGRVFIFPSSGTG 66
Query: 360 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGIDLGVLRDKLI 539 AWESA+ NTL+ DK+L R GQFSLLWVD +RL V+V D EWG G+ + D L Sbjct: 67 AWESAVENTLATGDKVLMSRFGQFSLLWVDMCERLGLKVEVCDEEWGTGVPVEKYADILA 126
Query: 540 ADSHHQIKAVCVVHNE 587 D +H+IKAV V HNE Sbjct: 127 KDKNHEIKAVFVTHNE 142
>sp|P16421|DHSS_ANACY Soluble hydrogenase 42 kDa subunit OS=Anabaena cylindrica PE=1 SV=1 Length = 383
Score = 82.8 bits (203), Expect = 1e-15 Identities = 44/136 (32%), Positives = 74/136 (54%) Frame = +3
Query: 180 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVRRIFKTTGATSFIIPTTGTG 359 L +PGP VPE L A+ ++ +R+ + V ++++ + +T ++ +GTG Sbjct: 7 LMIPGPTPVPEAALLALAKHPIGHRTSEFSNMMGEVTQNLKWLHQTESDV-LMLNVSGTG 65
Query: 360 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGIDLGVLRDKLI 539 A E+ + N LSP D+IL G+F WV+ Q +V+ + EWG +D KL Sbjct: 66 AVEAGMINFLSPGDRILVGSNGKFGERWVEVGQAFGLNVEAITAEWGQPLDPDKFAQKLQ 125
Query: 540 ADSHHQIKAVCVVHNE 587 AD++ +IKAV + H+E Sbjct: 126 ADTNKEIKAVIITHSE 141
>sp|Q58369|Y959_METJA Uncharacterized aminotransferase MJ0959 OS=Methanocaldococcus jannaschii GN=MJ0959 PE=3 SV=1 Length = 385
Score = 72.4 bits (176), Expect = 2e-12 Identities = 44/136 (32%), Positives = 72/136 (52%) Frame = +3
Query: 180 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVRRIFKTTGATSFIIPTTGTG 359 L +PGP VP +VL AM +R+ L + +E ++++F T T F+I +GT Sbjct: 10 LMIPGPTMVPPEVLNAMALPVIGHRTKDYSNLLEDTIEKLKKVFITENDT-FLITGSGTA 68
Query: 360 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGIDLGVLRDKLI 539 A + A++N + DK+L G F + + ++ + +DVEWG + +++ I Sbjct: 69 AMDMAISNIIKRGDKVLNIVTGNFGERFANIVKAYKGEAIRLDVEWGDMAEPEAVKE--I 126
Query: 540 ADSHHQIKAVCVVHNE 587 D + IKAV VVHNE Sbjct: 127 LDKYDDIKAVTVVHNE 142
>sp|P14776|DHSS_SYNP1 Soluble hydrogenase, small subunit OS=Synechococcus sp. (strain PCC 6716) PE=3 SV=1 Length = 384
Score = 58.9 bits (141), Expect = 2e-08 Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 2/138 (1%) Frame = +3
Query: 180 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVRRIFKTTGATSFIIPTTGTG 359 L +PGP VPE VL ++ ++ +RS + ++ ++ + +T I+ +GTG Sbjct: 7 LMIPGPTPVPESVLLSLGKHPIGHRSGEFSQIMAAMTAGIKWLHQTQNEV-LILAASGTG 65
Query: 360 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGIDLGVLRDKLI 539 A E+ + N LS D+++ G+F W + + + WG ++ K + Sbjct: 66 AMEAGIINFLSAGDRVVVGCNGKFGDRWGEVCDAYGLTTERISAPWGQPLNPDDF--KAV 123
Query: 540 ADSHHQ--IKAVCVVHNE 587 D H Q KAV V H+E Sbjct: 124 LDGHRQKPSKAVIVTHSE 141
>sp|O32148|PUCG_BACSU Purine catabolism protein pucG OS=Bacillus subtilis GN=pucG PE=2 SV=1 Length = 416
Score = 58.2 bits (139), Expect = 3e-08 Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 15/145 (10%) Frame = +3
Query: 180 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVRRIFKTTGATSFIIPTTGTG 359 + PGPV V +VLR M+ PA + +E +R +F+T ++ I T Sbjct: 14 IMTPGPVEVDPRVLRVMSTPVVGQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRA 73
Query: 360 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGID-------LG 518 E+ L + + P D +L G+F L + +R +V +++ EWG D + Sbjct: 74 GIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIK 133
Query: 519 VLRDKLIADSH--------HQIKAV 569 ++ K++A H H +KA+ Sbjct: 134 KVKPKIVAMVHGETSTGRIHPLKAI 158
>sp|Q54GT6|SPYA_DICDI Serine--pyruvate aminotransferase OS=Dictyostelium discoideum GN=agxt PE=3 SV=1 Length = 407
Score = 45.4 bits (106), Expect = 2e-04 Identities = 30/120 (25%), Positives = 53/120 (44%) Frame = +3
Query: 180 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVRRIFKTTGATSFIIPTTGTG 359 L PGP N+ +V + + + Y + + +E +R +F+T + I GT Sbjct: 21 LLGPGPSNLHPRVNQQLISSMVGYTDASYYKVMDETMELMRYLFQTDNHFTIPISGAGTA 80
Query: 360 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGIDLGVLRDKLI 539 A E+ ++N + P DK++ G FS R ++ VD +WG L + L+ Sbjct: 81 AMETCVSNLIEPGDKVVCLVSGFFSDRIYQMAVRYGGNILKVDKQWGQWFALEEIESALV 140
>sp|P21549|SPYA_HUMAN Serine--pyruvate aminotransferase OS=Homo sapiens GN=AGXT PE=1 SV=1 Length = 392
Score = 45.1 bits (105), Expect = 3e-04 Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 1/139 (0%) Frame = +3
Query: 174 NQLFV-PGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVRRIFKTTGATSFIIPTT 350 NQL + PGP N+P +++ A S M + + E ++ +F+T + +I + Sbjct: 22 NQLLLGPGPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGS 81
Query: 351 GTGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGIDLGVLRD 530 G A E+AL N L P D L G + VD +R+ V + + G L + + Sbjct: 82 GHCALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEE 141
Query: 531 KLIADSHHQIKAVCVVHNE 587 L + H+ + + H E Sbjct: 142 GL---AQHKPVLLFLTHGE 157
>sp|Q9KLY7|PHNW_VIBCH 2-aminoethylphosphonate--pyruvate transaminase OS=Vibrio cholerae GN=phnW PE=3 SV=1 Length = 367
Score = 41.2 bits (95), Expect = 0.004 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 9/145 (6%) Frame = +3
Query: 180 LFVPGPVNVPEQVLRAMNRN----NEDYRSPAMPTLSKSVLEDVRRIFKT-----TGATS 332 L PGP++ E V AM ++ ++DY + ++E +RR T +G TS Sbjct: 7 LLTPGPLSTSESVREAMLKDWCTWDDDY--------NLEIVEVIRRKLVTLATTQSGYTS 58
Query: 333 FIIPTTGTGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGID 512 ++ +GT + E+ + + + P DK+L G + Q LN V+ A + Sbjct: 59 VLMQGSGTASVEATIGSVMLPTDKLLVIDNGAYGARIAQIAQYLNIACRVIAPGETAQPN 118
Query: 513 LGVLRDKLIADSHHQIKAVCVVHNE 587 L + D L D I V +VH E Sbjct: 119 LDEIADVLTHDP--AITHVAIVHCE 141
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TY57 |
Definition |
tr|A9TY57|A9TY57_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
147 |
Score (bit) |
246.0 |
E-value |
9.0e-64 |
Report |
|