DK947735
Clone id YMU02A01NGRL0016_N11
Library
Length 171
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_N11. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCAATGCATCTGGCTCCCTGCAACTACTTGAAAGCTGATGTAAGCCGTGAGTCTTATTAA
GGTGACTCCAAATTGCTATCAGGAAATTGAAGCGATCATTTATCAAGTGACAAGTATATA
ACCTGCTGATGAAAAAGGTTCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q85ZS6
Definition sp|Q85ZS6|MATK_PSAJU Maturase K OS=Psathyrostachys juncea
Align length 40
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947735|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_N11, 5'
(144 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q85ZS6|MATK_PSAJU Maturase K OS=Psathyrostachys juncea GN=mat... 30 3.7
sp|Q9BRP0|OVOL2_HUMAN Transcription factor Ovo-like 2 OS=Homo sa... 29 8.2

>sp|Q85ZS6|MATK_PSAJU Maturase K OS=Psathyrostachys juncea GN=matK
PE=3 SV=1
Length = 511

Score = 30.0 bits (66), Expect = 3.7
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = -3

Query: 139 TFFISRLYTCHLINDRFNFLIAIWSHLNKTHGLHQLSSSC 20
TFF+ + + C+LIN + + W+ + H ++QL++SC
Sbjct: 294 TFFLKKKWKCYLIN-FWQYYFCFWTQPRRIH-INQLANSC 331


>sp|Q9BRP0|OVOL2_HUMAN Transcription factor Ovo-like 2 OS=Homo
sapiens GN=OVOL2 PE=2 SV=1
Length = 275

Score = 28.9 bits (63), Expect = 8.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3

Query: 142 RTFFISRLYTCHLINDRFNFLIAIWSHLNKTHGLHQ 35
RT R Y C++ N F ++ SHL K HG+ Q
Sbjct: 167 RTHTGIRPYKCNVCNKAFTQRCSLESHLKKIHGVQQ 202


tr_hit_id Q16R71
Definition tr|Q16R71|Q16R71_AEDAE Zinc finger protein (Fragment) OS=Aedes aegypti
Align length 25
Score (bit) 33.5
E-value 5.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947735|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_N11, 5'
(144 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q16R71|Q16R71_AEDAE Zinc finger protein (Fragment) OS=Aedes a... 33 5.6

>tr|Q16R71|Q16R71_AEDAE Zinc finger protein (Fragment) OS=Aedes
aegypti GN=AAEL011047 PE=4 SV=1
Length = 532

Score = 33.5 bits (75), Expect = 5.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3

Query: 118 YTCHLINDRFNFLIAIWSHLNKTHG 44
Y CH+ RFN+ +++ SH+ + HG
Sbjct: 155 YACHMCEQRFNYKVSLHSHIERHHG 179