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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947746
Clone id YMU02A01NGRL0016_N24
Library
Length 592
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_N24. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GCAAGTAGGTTTAGGGTTTCTGCAGTAGAGCAGCTACGGTGTCCGCCTGCTTCTCTTCAG
TTAATGGTTCGCTTGCAGCAGCAGCTGCCTCCACCACTAGGCCAGAGGGGCGTTTAACCC
TGTTGCAGGCTCCCCGCTCCTTGCGGACCTTGCGACCGTTCGAGCTTCGCATGCTCTCGC
TGTCTGTCCCTCGCAAAGGTCTACACAGACATGGATATGGTGTGGTTGGGCAAGCTCATG
CAGAGCCTTCTGTGGAAGAAGTTCAAGCCCTCGATGCCTCCTCAGACGAAGATGAGCGCG
AAGAAGGTGACTCTCTTGATAACGGACCTTCTTTTCGGGACAACGGCCCGCCCTTTGGTG
AGTCTGTGGCCAAGCTGTATGTTGGGAACCTGCCATGGAGCTGCAACAGCGAAGAACTTG
CTGGCGTTTTTCAGAAAGTGGGCAGCGTAGACATGGTTGAGGTTATTTATGACAAAGAGT
CTGGCAGGAGTCGTGGTTTTGGGTTTGTCACTATGAGCTCTGTAGAGGACTGTAATACTG
CCATTGAGAAGCTAGACGGGGCTGATTATGCTGGAAGGACATTGCGAGTGAA
■■Homology search results ■■ -
sp_hit_id Q9ZUU4
Definition sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana
Align length 89
Score (bit) 91.3
E-value 3.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947746|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_N24, 5'
         (592 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor...    91   3e-18
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O...    91   4e-18
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=...    91   6e-18
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=...    91   6e-18
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O...    88   3e-17
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S...    87   6e-17
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=...    86   1e-16
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=...    85   3e-16
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=...    84   5e-16
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=...    83   1e-15
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=...    81   4e-15
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=...    79   1e-14
sp|Q44554|RBPB_ANASP Putative RNA-binding protein rbpB OS=Anabae...    71   4e-12
sp|Q9WX37|RBPE_ANASP Putative RNA-binding protein rbpE OS=Anabae...    71   5e-12
sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit...    70   1e-11
sp|Q9H0L4|CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit...    70   1e-11
sp|Q57014|RBPA_SYNY3 Putative RNA-binding protein rbpA OS=Synech...    69   2e-11
sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sa...    69   2e-11
sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=...    68   3e-11
sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=...    68   3e-11
sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=...    68   3e-11
sp|Q9WX39|RBPF_ANASP Putative RNA-binding protein rbpF OS=Anabae...    68   4e-11
sp|Q44560|RBPA_ANASP Putative RNA-binding protein rbpA OS=Anabae...    68   4e-11
sp|Q5RDA3|CSTF2_PONAB Cleavage stimulation factor 64 kDa subunit...    68   4e-11
sp|P33240|CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit...    68   4e-11
sp|Q8HXM1|CSTF2_BOVIN Cleavage stimulation factor 64 kDa subunit...    68   4e-11
sp|Q8BIQ5|CSTF2_MOUSE Cleavage stimulation factor 64 kDa subunit...    67   5e-11
sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pong...    66   1e-10
sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo...    66   1e-10
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh...    66   1e-10

>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
           chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
           SV=1
          Length = 289

 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 3/89 (3%)
 Frame = +3

Query: 333 FRDNGPPFGESVA---KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFG 503
           F D  PP  +S +   KL+VGNLP++ +S +LA +F+  G+V+MVEVIYDK +GRSRGFG
Sbjct: 76  FADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFG 135

Query: 504 FVTMSSVEDCNTAIEKLDGADYAGRTLRV 590
           FVTMSSV +   A ++ +G +  GR LRV
Sbjct: 136 FVTMSSVSEVEAAAQQFNGYELDGRPLRV 164



 Score = 77.8 bits (190), Expect = 4e-14
 Identities = 39/90 (43%), Positives = 53/90 (58%)
 Frame = +3

Query: 321 NGPSFRDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGF 500
           +G  +   G     S  ++YVGNL W  +   L  +F + G V    VIYD++SGRS+GF
Sbjct: 188 SGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGF 247

Query: 501 GFVTMSSVEDCNTAIEKLDGADYAGRTLRV 590
           GFVT  S ++   AI+ LDGAD  GR +RV
Sbjct: 248 GFVTYDSSQEVQNAIKSLDGADLDGRQIRV 277


>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 291

 Score = 90.9 bits (224), Expect = 4e-18
 Identities = 45/81 (55%), Positives = 62/81 (76%)
 Frame = +3

Query: 348 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 527
           P F E + KL+VGNLP+S +S  LAG+F++ G+V+MVEVIYDK +GRSRGFGFVTMS+ E
Sbjct: 81  PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKE 139

Query: 528 DCNTAIEKLDGADYAGRTLRV 590
           +   A ++ +G +  GR +RV
Sbjct: 140 EVEAAEQQFNGYEIDGRAIRV 160



 Score = 79.0 bits (193), Expect = 2e-14
 Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 8/93 (8%)
 Frame = +3

Query: 336 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 491
           RD    FG        +S  ++YVGNL W  +   L  +F + G+V   +V+YD++SGRS
Sbjct: 188 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 247

Query: 492 RGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRV 590
           RGFGFVT SS ++ N AI+ L+G D  GR++RV
Sbjct: 248 RGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRV 280


>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 292

 Score = 90.5 bits (223), Expect = 6e-18
 Identities = 45/81 (55%), Positives = 62/81 (76%)
 Frame = +3

Query: 348 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 527
           P F E + KL+VGNLP+S +S  LAG+F++ G+V++VEVIYDK SGRSRGFGFVTMS+ E
Sbjct: 82  PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140

Query: 528 DCNTAIEKLDGADYAGRTLRV 590
           +   A ++ +G +  GR +RV
Sbjct: 141 EVEAAEQQFNGYEIDGRAIRV 161



 Score = 79.3 bits (194), Expect = 1e-14
 Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 8/93 (8%)
 Frame = +3

Query: 336 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 491
           RD    FG        +S  ++YVGNL W  +   L  +F + G+V   +V+YD++SGRS
Sbjct: 189 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 248

Query: 492 RGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRV 590
           RGFGFVT SS ++ N AI+ L+G D  GR++RV
Sbjct: 249 RGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRV 281


>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 233

 Score = 90.5 bits (223), Expect = 6e-18
 Identities = 46/86 (53%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
 Frame = +3

Query: 339 DNGPPFGE--SVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVT 512
           + G  F E    AKL+VGNLP+  +SE+LAG+F   G V++ EVIY++E+ RSRGFGFVT
Sbjct: 43  EGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVT 102

Query: 513 MSSVEDCNTAIEKLDGADYAGRTLRV 590
           MS+VE+   A+E L+G D  GR L V
Sbjct: 103 MSTVEEAEKAVELLNGYDMDGRQLTV 128



 Score = 77.8 bits (190), Expect = 4e-14
 Identities = 38/77 (49%), Positives = 49/77 (63%)
 Frame = +3

Query: 360 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 539
           E   ++YVGNLPW  ++  L  +F + G V    V+ D+E+GRSRGFGFVTMSS  + N 
Sbjct: 146 EPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVND 205

Query: 540 AIEKLDGADYAGRTLRV 590
           AI  LDG    GR +RV
Sbjct: 206 AIAALDGQTLDGRAVRV 222


>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 273

 Score = 88.2 bits (217), Expect = 3e-17
 Identities = 42/73 (57%), Positives = 57/73 (78%)
 Frame = +3

Query: 372 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 551
           K++VGNLP+S +S  LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+   A ++
Sbjct: 88  KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 552 LDGADYAGRTLRV 590
            +G +  GR LRV
Sbjct: 148 FNGYELDGRALRV 160



 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 40/77 (51%), Positives = 53/77 (68%)
 Frame = +3

Query: 360 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 539
           +S  ++YVGNL W  + + L  +F + G V   +V+YD++SGRSRGFGFVT SS E+ N 
Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 244

Query: 540 AIEKLDGADYAGRTLRV 590
           AIE LDG D  GR +RV
Sbjct: 245 AIESLDGVDLNGRAIRV 261


>sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic
           OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1
          Length = 260

 Score = 87.0 bits (214), Expect = 6e-17
 Identities = 39/78 (50%), Positives = 57/78 (73%)
 Frame = +3

Query: 357 GESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCN 536
           GE   +LYVGN+P + N++EL  + ++ G++++ EV+YDK SGRSR FGFVTM +VED N
Sbjct: 80  GEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDAN 139

Query: 537 TAIEKLDGADYAGRTLRV 590
             IEKL+  +  GR ++V
Sbjct: 140 AVIEKLNDTEIGGRKIKV 157



 Score = 50.4 bits (119), Expect = 6e-06
 Identities = 29/79 (36%), Positives = 44/79 (55%)
 Frame = +3

Query: 354 FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDC 533
           F ES  K+Y+GNL  +  +E L   F + G V   +V     + +S GFGFV+ SS E+ 
Sbjct: 179 FVESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEV 238

Query: 534 NTAIEKLDGADYAGRTLRV 590
             AI+ L+ +   G+ +RV
Sbjct: 239 EAAIQALNNSVLEGQKIRV 257


>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 279

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 8/95 (8%)
 Frame = +3

Query: 330 SFRDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 485
           SFR+N    G        +S  ++YVGNL W  + + L  +F + G V   +V+YD++SG
Sbjct: 173 SFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSG 232

Query: 486 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRV 590
           RSRGFGFVT SS E+ N AIE LDG D  GR +RV
Sbjct: 233 RSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRV 267



 Score = 84.3 bits (207), Expect = 4e-16
 Identities = 41/73 (56%), Positives = 56/73 (76%)
 Frame = +3

Query: 372 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 551
           K++VGNL +S +S  LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+   A ++
Sbjct: 88  KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 552 LDGADYAGRTLRV 590
            +G +  GR LRV
Sbjct: 148 FNGYELDGRALRV 160


>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1
          Length = 329

 Score = 84.7 bits (208), Expect = 3e-16
 Identities = 40/84 (47%), Positives = 54/84 (64%)
 Frame = +3

Query: 339 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 518
           +  P   E   ++YVGNLPW  ++  L  +F + G V    V+YD+E+GRSRGFGFVTMS
Sbjct: 234 ERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMS 293

Query: 519 SVEDCNTAIEKLDGADYAGRTLRV 590
            V++ N AI  LDG +  GR +RV
Sbjct: 294 DVDELNEAISALDGQNLEGRAIRV 317



 Score = 84.3 bits (207), Expect = 4e-16
 Identities = 40/74 (54%), Positives = 57/74 (77%)
 Frame = +3

Query: 369 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 548
           AKL+VGNL +  NS+ LA +F++ G+V++ EVIY++E+ +SRGFGFVTMSSV++  TA+E
Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209

Query: 549 KLDGADYAGRTLRV 590
           K +  D  GR L V
Sbjct: 210 KFNRYDLNGRLLTV 223


>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2
          Length = 342

 Score = 84.0 bits (206), Expect = 5e-16
 Identities = 39/73 (53%), Positives = 56/73 (76%)
 Frame = +3

Query: 372 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 551
           KL+VGNL ++ +S +LA +F+  G+V+MVEVIYDK +GRSRGFGFVTMS+  +   A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159

Query: 552 LDGADYAGRTLRV 590
            +G ++ GR LRV
Sbjct: 160 FNGYEFEGRPLRV 172



 Score = 77.8 bits (190), Expect = 4e-14
 Identities = 37/73 (50%), Positives = 49/73 (67%)
 Frame = +3

Query: 372 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 551
           +LYVGNL W  +   L  +F + G V    VIYD++SGRS+GFGFVT+SS ++   AI  
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317

Query: 552 LDGADYAGRTLRV 590
           L+GAD  GR +RV
Sbjct: 318 LNGADLDGRQIRV 330


>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana sylvestris PE=1 SV=1
          Length = 276

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 41/74 (55%), Positives = 55/74 (74%)
 Frame = +3

Query: 369 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 548
           AKL+VGNLP+  +SE LA +FQ+ G V++ EVIY++E+ RSRGFGFVTMS+VE+ + A+E
Sbjct: 97  AKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVE 156

Query: 549 KLDGADYAGRTLRV 590
                D  GR L V
Sbjct: 157 LYSQYDLNGRLLTV 170



 Score = 80.9 bits (198), Expect = 4e-15
 Identities = 39/84 (46%), Positives = 52/84 (61%)
 Frame = +3

Query: 339 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 518
           +  P   +   ++YVGN+PW  +   L  VF + G V    V++D+ESGRSRGFGFVTMS
Sbjct: 181 ERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMS 240

Query: 519 SVEDCNTAIEKLDGADYAGRTLRV 590
           S  + + AI  LDG    GRT+RV
Sbjct: 241 SEAEMSEAIANLDGQTLDGRTIRV 264
tr_hit_id A5BDH4
Definition tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 73
Score (bit) 111.0
E-value 3.0e-23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947746|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_N24, 5'
         (592 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis...   111   3e-23
tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome ...   110   8e-23
tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomit...   104   4e-21
tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseo...   102   2e-20
tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea m...   101   3e-20
tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Popul...   100   5e-20
tr|B7FKI6|B7FKI6_MEDTR Putative uncharacterized protein OS=Medic...    99   1e-19
tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subs...    98   3e-19
tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza...    98   3e-19
tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1       98   4e-19
tr|O04240|O04240_VICFA RNA- or ssDNA-binding protein (Fragment) ...    96   1e-18
tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein (Fra...    96   1e-18
tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subs...    96   2e-18
tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1       96   2e-18
tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza...    96   2e-18
tr|A7PT43|A7PT43_VITVI Chromosome chr8 scaffold_29, whole genome...    96   2e-18
tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativ...    95   3e-18
tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subs...    95   3e-18
tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea...    95   3e-18
tr|A2XHA8|A2XHA8_ORYSI Putative uncharacterized protein OS=Oryza...    95   3e-18
tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella paten...    95   3e-18
tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella paten...    95   3e-18
tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment) OS=Physcomit...    94   6e-18
tr|A9P1T0|A9P1T0_PICSI Putative uncharacterized protein OS=Picea...    93   1e-17
tr|A9NNN9|A9NNN9_PICSI Putative uncharacterized protein OS=Picea...    93   1e-17
tr|Q8L941|Q8L941_ARATH Putative RNA-binding protein OS=Arabidops...    91   4e-17
tr|Q7GA50|Q7GA50_ARATH Putative RNA-binding protein OS=Arabidops...    91   4e-17
tr|Q41367|Q41367_SPIOL 24 kDa RNA binding protein (Fragment) OS=...    91   4e-17
tr|B6SS58|B6SS58_MAIZE Ribonucleoprotein OS=Zea mays PE=2 SV=1         90   8e-17
tr|B4FMY7|B4FMY7_MAIZE Putative uncharacterized protein OS=Zea m...    89   2e-16

>tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_026573 PE=4 SV=1
          Length = 355

 Score =  111 bits (277), Expect = 3e-23
 Identities = 50/73 (68%), Positives = 61/73 (83%)
 Frame = +3

Query: 372 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 551
           KLY GNLP+SC+S  LAG+ Q  GS ++VEV+YD+++GRSRGF FVTMSSVEDCN  IE 
Sbjct: 67  KLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSSVEDCNAVIEN 126

Query: 552 LDGADYAGRTLRV 590
           LDG++Y GRTLRV
Sbjct: 127 LDGSEYGGRTLRV 139



 Score = 47.0 bits (110), Expect = 8e-04
 Identities = 23/46 (50%), Positives = 30/46 (65%)
 Frame = +3

Query: 348 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 485
           P + E+  KL+VGNL WS  SE L  VFQ+ G+V    V+YD E+G
Sbjct: 150 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETG 195


>tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020349001
           PE=4 SV=1
          Length = 283

 Score =  110 bits (274), Expect = 8e-23
 Identities = 49/73 (67%), Positives = 62/73 (84%)
 Frame = +3

Query: 372 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 551
           KLY GNLP+SC+S +LAG+ Q  GS ++VEV+Y++++GRSRGF FVTMSSVEDCN  IE 
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171

Query: 552 LDGADYAGRTLRV 590
           LDG++Y GRTLRV
Sbjct: 172 LDGSEYGGRTLRV 184



 Score = 81.3 bits (199), Expect = 4e-14
 Identities = 39/81 (48%), Positives = 55/81 (67%)
 Frame = +3

Query: 348 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 527
           P + E+  KL+VGNL WS  SE L  VFQ+ G+V    V+YD E+GRSRG+GFV  S+  
Sbjct: 195 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKA 254

Query: 528 DCNTAIEKLDGADYAGRTLRV 590
           + +TA+E L+G +  GR +R+
Sbjct: 255 EMDTALESLNGVELEGRAIRI 275


>tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_47163 PE=4 SV=1
          Length = 192

 Score =  104 bits (259), Expect = 4e-21
 Identities = 47/73 (64%), Positives = 59/73 (80%)
 Frame = +3

Query: 372 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 551
           KLY+GNLPW C+S +LAG+ Q+ GSV++VEVIYD+ESGRSRGF FVTM++ ED    IE+
Sbjct: 1   KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60

Query: 552 LDGADYAGRTLRV 590
           LDG D  GR L+V
Sbjct: 61  LDGHDVGGRPLKV 73



 Score = 80.1 bits (196), Expect = 9e-14
 Identities = 38/73 (52%), Positives = 50/73 (68%)
 Frame = +3

Query: 372 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 551
           K++VGNL W  ++  L  +F   G V    V+YD+ESGRSRGFGFVT S V + + AI+ 
Sbjct: 108 KVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDS 167

Query: 552 LDGADYAGRTLRV 590
           LDGA++ GR LRV
Sbjct: 168 LDGAEFDGRELRV 180


>tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseolus
           vulgaris GN=RNP1 PE=2 SV=1
          Length = 287

 Score =  102 bits (254), Expect = 2e-20
 Identities = 45/73 (61%), Positives = 59/73 (80%)
 Frame = +3

Query: 372 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 551
           KLY GNLP+S +S +LAG+ Q  GS +++EV+YD+++G+SRGF FVTMS +EDCN  IE 
Sbjct: 114 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 173

Query: 552 LDGADYAGRTLRV 590
           LDG +Y GRTLRV
Sbjct: 174 LDGKEYLGRTLRV 186



 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 36/81 (44%), Positives = 51/81 (62%)
 Frame = +3

Query: 348 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 527
           P + E+  KL+VGNL WS  +E L   FQ+ G+V    V+YD E+GRSRG+GFV  S+ E
Sbjct: 197 PLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCFSTKE 256

Query: 528 DCNTAIEKLDGADYAGRTLRV 590
           +   A+  L+  +  GR +RV
Sbjct: 257 EMEAALGALNDVELEGRAMRV 277


>tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 287

 Score =  101 bits (252), Expect = 3e-20
 Identities = 48/91 (52%), Positives = 66/91 (72%), Gaps = 2/91 (2%)
 Frame = +3

Query: 324 GPSFRDNGPPFGESVA--KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 497
           G S  D+GP    S    KLY GNLP++C+S +LAG+ Q+  S +MVEV+YD+ +GRSRG
Sbjct: 99  GASSDDSGPSVAASTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRG 158

Query: 498 FGFVTMSSVEDCNTAIEKLDGADYAGRTLRV 590
           F FVTM++V+DC   I+ LDG+ Y GRT++V
Sbjct: 159 FAFVTMTTVQDCELVIKNLDGSLYGGRTMKV 189



 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
 Frame = +3

Query: 330 SFRDNGPP----FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 497
           +F D   P    + E+  KL+VGNL W+  SE L   F + G+V    V+YD E+GRSRG
Sbjct: 190 NFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRG 249

Query: 498 FGFVTMSSVEDCNTAIEKLDGADYAGRTLRV 590
           +GFV  S+ E+ + A+  L+G +  GR +RV
Sbjct: 250 YGFVCYSTREEMDEALSSLNGMEMEGREMRV 280


>tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 279

 Score =  100 bits (250), Expect = 5e-20
 Identities = 46/73 (63%), Positives = 59/73 (80%)
 Frame = +3

Query: 372 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 551
           KLY GNLP++ +S +LAG+ Q+ G+ +MVEV+Y +E+GRSRGF FVTMSS+EDC T IE 
Sbjct: 108 KLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCETVIEN 167

Query: 552 LDGADYAGRTLRV 590
           LDG+ Y GR LRV
Sbjct: 168 LDGSQYMGRILRV 180



 Score = 80.9 bits (198), Expect = 5e-14
 Identities = 38/81 (46%), Positives = 54/81 (66%)
 Frame = +3

Query: 348 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 527
           P + E+  KL++GNL WS  SE L   FQ+ G+V    V+YD E+G+SRG+GFV  S+ E
Sbjct: 191 PLYPETEYKLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKE 250

Query: 528 DCNTAIEKLDGADYAGRTLRV 590
           +  TA++ L+G +  GR LRV
Sbjct: 251 ELETALQSLNGVELEGRALRV 271


>tr|B7FKI6|B7FKI6_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 285

 Score = 99.4 bits (246), Expect = 1e-19
 Identities = 47/84 (55%), Positives = 64/84 (76%), Gaps = 6/84 (7%)
 Frame = +3

Query: 357 GESVA------KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 518
           GE+VA      KLY GNLP+S +S  LAG+ ++ GS +++EV+YD+++G+SRGF FVTMS
Sbjct: 103 GETVAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMS 162

Query: 519 SVEDCNTAIEKLDGADYAGRTLRV 590
            VEDCN  I+ LDG ++ GRTLRV
Sbjct: 163 CVEDCNAVIQNLDGKEFMGRTLRV 186



 Score = 74.3 bits (181), Expect = 5e-12
 Identities = 35/81 (43%), Positives = 54/81 (66%)
 Frame = +3

Query: 348 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 527
           P + E+  KL+VGNL W+  SE L   FQ+ G+V    V++D E+G+SRG+GFV+ ++  
Sbjct: 197 PLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKS 256

Query: 528 DCNTAIEKLDGADYAGRTLRV 590
           + +TA+  +D  +  GRTLRV
Sbjct: 257 EMDTALAIMDNVELEGRTLRV 277


>tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subsp.
           japonica GN=P0643F09.1 PE=2 SV=1
          Length = 316

 Score = 98.2 bits (243), Expect = 3e-19
 Identities = 43/73 (58%), Positives = 59/73 (80%)
 Frame = +3

Query: 372 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 551
           KLY GNLP++C+S +LAG+ Q   + +MVEV+YD+ +GRSRGF FVTMS++EDC   I+ 
Sbjct: 146 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 205

Query: 552 LDGADYAGRTLRV 590
           LDG+ Y+GRT+RV
Sbjct: 206 LDGSLYSGRTMRV 218



 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 38/81 (46%), Positives = 54/81 (66%)
 Frame = +3

Query: 348 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 527
           P + E+  KL+VGNL W+  SE L  +FQK G+V    V+YD E+GRSRG+GFV  S+ E
Sbjct: 229 PLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKE 288

Query: 528 DCNTAIEKLDGADYAGRTLRV 590
           + + A+  L+G +  GR +RV
Sbjct: 289 EMDEALSSLNGTELEGREIRV 309


>tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09422 PE=4 SV=1
          Length = 318

 Score = 98.2 bits (243), Expect = 3e-19
 Identities = 43/73 (58%), Positives = 59/73 (80%)
 Frame = +3

Query: 372 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 551
           KLY GNLP++C+S +LAG+ Q   + +MVEV+YD+ +GRSRGF FVTMS++EDC   I+ 
Sbjct: 148 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 207

Query: 552 LDGADYAGRTLRV 590
           LDG+ Y+GRT+RV
Sbjct: 208 LDGSLYSGRTMRV 220



 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 38/81 (46%), Positives = 54/81 (66%)
 Frame = +3

Query: 348 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 527
           P + E+  KL+VGNL W+  SE L  +FQK G+V    V+YD E+GRSRG+GFV  S+ E
Sbjct: 231 PLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKE 290

Query: 528 DCNTAIEKLDGADYAGRTLRV 590
           + + A+  L+G +  GR +RV
Sbjct: 291 EMDEALSSLNGTELEGREIRV 311


>tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
          Length = 268

 Score = 97.8 bits (242), Expect = 4e-19
 Identities = 47/84 (55%), Positives = 64/84 (76%)
 Frame = +3

Query: 339 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 518
           D    F E + KL+VGNLP+S +S +LAG+F++ GSV+MVEV+YD+ +GRSRGFGFVTMS
Sbjct: 70  DGSEEFSEDL-KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMS 128

Query: 519 SVEDCNTAIEKLDGADYAGRTLRV 590
           S E+   A+E+ +G  + GR LRV
Sbjct: 129 SAEEAEAAVEQFNGYAFQGRQLRV 152



 Score = 84.0 bits (206), Expect = 6e-15
 Identities = 41/82 (50%), Positives = 53/82 (64%)
 Frame = +3

Query: 345 GPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSV 524
           G  F +S  K+YVGNL W  ++  L  +F + G V   +VIYD++SGRSRGFGFVT  S 
Sbjct: 176 GGGFVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSA 235

Query: 525 EDCNTAIEKLDGADYAGRTLRV 590
           ++ N AI  LDG D  GR +RV
Sbjct: 236 QEVNNAISNLDGIDLDGRQIRV 257