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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947749
Clone id YMU02A01NGRL0016_O03
Library
Length 189
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_O03. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
TAAATTTGAAATTGGATTTATCAATTTTATGTTTTTGGCAATAATTAAGTTTCAAAATTA
TGGTCAACAAGTTCTCGAAGCCGCAAACTACATTGGTCAAGGATTTGCAGTTACCTTGGA
TCATTTGAATCGTTTACCCATAACTGTTCAGTATCCATAGAAAAAAAAAAAAAAAAAAAA
AAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q85FH1
Definition sp|Q85FH1|NDHI_ADICA NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Adiantum capillus-veneris
Align length 43
Score (bit) 90.1
E-value 3.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947749|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_O03, 5'
         (160 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q85FH1|NDHI_ADICA NAD(P)H-quinone oxidoreductase subunit I, c...    90   3e-18
sp|Q8HVN5|NDHI_PALAR NAD(P)H-quinone oxidoreductase subunit I, c...    67   3e-11
sp|Q7I7Y4|NDHI_ZEXSE NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVJ0|NDHI_WEDTE NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVJ9|NDHI_TRIME NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVJ3|NDHI_TILBA NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVK8|NDHI_STESO NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVK2|NDHI_SPHTR NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVL4|NDHI_SIGBL NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVL9|NDHI_RIEOB NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVL8|NDHI_RENSL NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVN1|NDHI_PEROV NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVL1|NDHI_PERMO NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q68RV2|NDHI_PANGI NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVN7|NDHI_OXYSB NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVP4|NDHI_MILQU NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVN6|NDHI_MELNV NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVP5|NDHI_LUNJA NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVP9|NDHI_LIPIN NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q06R76|NDHI_JASNU NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVQ1|NDHI_ECLPR NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVT7|NDHI_DIMVE NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVU5|NDHI_CLIAL NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVW3|NDHI_ACAAU NAD(P)H-quinone oxidoreductase subunit I, c...    66   6e-11
sp|Q8HVI9|NDHI_ZINJU NAD(P)H-quinone oxidoreductase subunit I, c...    65   8e-11
sp|Q8HVJ1|NDHI_ZALME NAD(P)H-quinone oxidoreductase subunit I, c...    65   8e-11
sp|Q8HVJ4|NDHI_VILAC NAD(P)H-quinone oxidoreductase subunit I, c...    65   8e-11
sp|Q8HVJ6|NDHI_VERJA NAD(P)H-quinone oxidoreductase subunit I, c...    65   8e-11
sp|Q8HVJ7|NDHI_VENCA NAD(P)H-quinone oxidoreductase subunit I, c...    65   8e-11
sp|Q8HVJ8|NDHI_VARMX NAD(P)H-quinone oxidoreductase subunit I, c...    65   8e-11

>sp|Q85FH1|NDHI_ADICA NAD(P)H-quinone oxidoreductase subunit I,
           chloroplastic OS=Adiantum capillus-veneris GN=ndhI PE=2
           SV=2
          Length = 167

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP
Sbjct: 1   MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 43


>sp|Q8HVN5|NDHI_PALAR NAD(P)H-quinone oxidoreductase subunit I,
           chloroplastic OS=Palafoxia arida GN=ndhI PE=3 SV=1
          Length = 166

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + KF NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPMVTKFMNYGQQTVRAARYIGQGFIITLSHANRLPVTIQYP 43


>sp|Q7I7Y4|NDHI_ZEXSE NAD(P)H-quinone oxidoreductase subunit I,
           chloroplastic OS=Zexmenia serrata GN=ndhI PE=3 SV=1
          Length = 166

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPMVTEFMNYGQQTIRAARYIGQGFMITLSHANRLPVTIQYP 43


>sp|Q8HVJ0|NDHI_WEDTE NAD(P)H-quinone oxidoreductase subunit I,
           chloroplastic OS=Wedelia tegetis GN=ndhI PE=3 SV=1
          Length = 166

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPMVTEFMNYGQQTIRAARYIGQGFMITLSHANRLPVTIQYP 43


>sp|Q8HVJ9|NDHI_TRIME NAD(P)H-quinone oxidoreductase subunit I,
           chloroplastic OS=Trigonospermum melampodioides GN=ndhI
           PE=3 SV=1
          Length = 166

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPTVTEFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYP 43


>sp|Q8HVJ3|NDHI_TILBA NAD(P)H-quinone oxidoreductase subunit I,
           chloroplastic OS=Tilesia baccata GN=ndhI PE=3 SV=1
          Length = 166

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPMVTEFMNYGQQTIRAARYIGQGFMITLSHANRLPVTIQYP 43


>sp|Q8HVK8|NDHI_STESO NAD(P)H-quinone oxidoreductase subunit I,
           chloroplastic OS=Steiractinia sodiroi GN=ndhI PE=3 SV=1
          Length = 166

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPMVTEFMNYGQQTIRAARYIGQGFMITLSHANRLPVTIQYP 43


>sp|Q8HVK2|NDHI_SPHTR NAD(P)H-quinone oxidoreductase subunit I,
           chloroplastic OS=Sphagneticola trilobata GN=ndhI PE=3
           SV=1
          Length = 166

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPMVTEFMNYGQQTIRAARYIGQGFMITLSHANRLPVTIQYP 43


>sp|Q8HVL4|NDHI_SIGBL NAD(P)H-quinone oxidoreductase subunit I,
           chloroplastic OS=Sigesbeckia blakei GN=ndhI PE=3 SV=1
          Length = 166

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPTVTEFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYP 43


>sp|Q8HVL9|NDHI_RIEOB NAD(P)H-quinone oxidoreductase subunit I,
           chloroplastic OS=Riencourtia oblongifolia GN=ndhI PE=3
           SV=1
          Length = 166

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPMVTEFMNYGQQTIRAARYIGQGFMITLSHANRLPVTIQYP 43
tr_hit_id Q8HVN0
Definition tr|Q8HVN0|Q8HVN0_OYEVE NADH dehydrogenase subunit I OS=Oyedaea verbesinoides
Align length 43
Score (bit) 65.9
E-value 1.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947749|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0016_O03, 5'
         (160 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8HVN0|Q8HVN0_OYEVE NADH dehydrogenase subunit I OS=Oyedaea v...    66   1e-09
tr|B2XW93|B2XW93_9ASTR NADH dehydrogenase subunit I OS=Felicia h...    66   1e-09
tr|B2LMP4|B2LMP4_GUIAB NADH-plastoquinone oxidoreductase subunit...    66   1e-09
tr|Q8HVW1|Q8HVW1_ALEAN NADH dehydrogenase subunit I OS=Alepidocl...    65   1e-09
tr|Q8HVW0|Q8HVW0_ALLSB NADH dehydrogenase subunit I OS=Alloisper...    65   1e-09
tr|Q8HVV9|Q8HVV9_AMBPU NADH dehydrogenase subunit I OS=Amblyopap...    65   1e-09
tr|Q8HVK1|Q8HVK1_TRICG NADH dehydrogenase subunit I OS=Trichocor...    65   1e-09
tr|B2Y6C0|B2Y6C0_9ASTR NADH dehydrogenase subunit I OS=Psacalium...    65   1e-09
tr|B2XWE5|B2XWE5_9ASTR NADH dehydrogenase subunit I OS=Youngia j...    65   1e-09
tr|B2XWE4|B2XWE4_9ASTR NADH dehydrogenase subunit I OS=Wunderlic...    65   1e-09
tr|B2XWE3|B2XWE3_9ASTR NADH dehydrogenase subunit I OS=Ursinia s...    65   1e-09
tr|B2XWE2|B2XWE2_9ASTR NADH dehydrogenase subunit I OS=Trixis di...    65   1e-09
tr|B2XWE1|B2XWE1_9ASTR NADH dehydrogenase subunit I OS=Trichocli...    65   1e-09
tr|B2XWE0|B2XWE0_9ASTR NADH dehydrogenase subunit I OS=Tarchonan...    65   1e-09
tr|B2XWD9|B2XWD9_9ASTR NADH dehydrogenase subunit I OS=Syncarpha...    65   1e-09
tr|B2XWD8|B2XWD8_9ASTR NADH dehydrogenase subunit I OS=Stomatoch...    65   1e-09
tr|B2XWD7|B2XWD7_STOLA NADH dehydrogenase subunit I OS=Stokesia ...    65   1e-09
tr|B2XWD6|B2XWD6_9ASTR NADH dehydrogenase subunit I OS=Stifftia ...    65   1e-09
tr|B2XWD5|B2XWD5_9ASTR NADH dehydrogenase subunit I OS=Stenopadu...    65   1e-09
tr|B2XWD4|B2XWD4_SONOL NADH dehydrogenase subunit I OS=Sonchus o...    65   1e-09
tr|B2XWD3|B2XWD3_9ASTR NADH dehydrogenase subunit I OS=Senecio p...    65   1e-09
tr|B2XWD2|B2XWD2_9ASTR NADH dehydrogenase subunit I OS=Scolymus ...    65   1e-09
tr|B2XWD0|B2XWD0_9ASTR NADH dehydrogenase subunit I OS=Relhania ...    65   1e-09
tr|B2XWC9|B2XWC9_9ASTR NADH dehydrogenase subunit I OS=Proustia ...    65   1e-09
tr|B2XWC8|B2XWC8_9ASTR NADH dehydrogenase subunit I OS=Pluchea c...    65   1e-09
tr|B2XWC7|B2XWC7_9ASTR NADH dehydrogenase subunit I OS=Plazia da...    65   1e-09
tr|B2XWC6|B2XWC6_9ASTR NADH dehydrogenase subunit I OS=Platycarp...    65   1e-09
tr|B2XWC5|B2XWC5_9ASTR NADH dehydrogenase subunit I OS=Pertya sc...    65   1e-09
tr|B2XWC4|B2XWC4_9ASTR NADH dehydrogenase subunit I OS=Perezia p...    65   1e-09
tr|B2XWC3|B2XWC3_9ASTR NADH dehydrogenase subunit I OS=Pasaccard...    65   1e-09

>tr|Q8HVN0|Q8HVN0_OYEVE NADH dehydrogenase subunit I OS=Oyedaea
           verbesinoides GN=ndhI PE=3 SV=1
          Length = 166

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPMVTEFMNYGQQTIRAARYIGQGFMITLSHANRLPVTIQYP 43


>tr|B2XW93|B2XW93_9ASTR NADH dehydrogenase subunit I OS=Felicia
           heterophylla GN=ndhI PE=4 SV=1
          Length = 166

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+TVQYP
Sbjct: 1   MFPMVTEFMNYGQQTVRAARYIGQGFIITLSHANRLPVTVQYP 43


>tr|B2LMP4|B2LMP4_GUIAB NADH-plastoquinone oxidoreductase subunit I
           OS=Guizotia abyssinica GN=ndhI PE=4 SV=1
          Length = 166

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPTVTEFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYP 43


>tr|Q8HVW1|Q8HVW1_ALEAN NADH dehydrogenase subunit I OS=Alepidocline
           annua GN=ndhI PE=3 SV=1
          Length = 166

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPMVTEFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYP 43


>tr|Q8HVW0|Q8HVW0_ALLSB NADH dehydrogenase subunit I OS=Alloispermum
           scabrifolium GN=ndhI PE=3 SV=1
          Length = 166

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPMVTEFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYP 43


>tr|Q8HVV9|Q8HVV9_AMBPU NADH dehydrogenase subunit I OS=Amblyopappus
           pusillus GN=ndhI PE=3 SV=1
          Length = 166

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPMVTEFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYP 43


>tr|Q8HVK1|Q8HVK1_TRICG NADH dehydrogenase subunit I OS=Trichocoryne
           connata GN=ndhI PE=3 SV=1
          Length = 166

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPMVTEFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYP 43


>tr|B2Y6C0|B2Y6C0_9ASTR NADH dehydrogenase subunit I OS=Psacalium
           paucicapitatum GN=ndhI PE=4 SV=1
          Length = 166

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPMVTEFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYP 43


>tr|B2XWE5|B2XWE5_9ASTR NADH dehydrogenase subunit I OS=Youngia
           japonica GN=ndhI PE=4 SV=1
          Length = 166

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPMVTEFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYP 43


>tr|B2XWE4|B2XWE4_9ASTR NADH dehydrogenase subunit I OS=Wunderlichia
           mirabilis GN=ndhI PE=4 SV=1
          Length = 166

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 29  MFLAIIKFQNYGQQVLEAANYIGQGFAVTLDHLNRLPITVQYP 157
           MF  + +F NYGQQ + AA YIGQGF +TL H NRLP+T+QYP
Sbjct: 1   MFPMVTEFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYP 43