DK947753 |
Clone id |
YMU02A01NGRL0016_O07 |
Library |
YMU02 |
Length |
555 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_O07. 5' end sequence. |
Accession |
DK947753 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL1646Contig1 |
Sequence |
GCTTTTCTGCAGAAATAGATGGAAAACAGGTTGAGATAACCCTCTTGCAAGACGTAGCAG CCAACCAGATGAATCCTCAGAAAGCAGGTATGAAGAAGAAGAAGAAGAAGAACGGAAACT TGCAGAAGAATGTGGGGGAGGAGCTAGCTGTCCAAGCAGTGAAAACGACTAGTGCTGACG AGGAGGAAGATGAAGTGGAAGATGCAGATGATGATAAGGATAGTGATGAGGAAGCGGCAG AGGAAAGCGAGGACCCCAATGAGCAGGAGTCAGACGATGATTCTGAGCTTGAGGAGGTCA TGGAGATGTTCATTCCCCCTGGTGCTGTATTTTCCCCAGAGAAGCCTTTATCAAAGCTCC CCGGTTCTAATATTTACCTTGGTCCTTATGCAAGAGGTGGTAGAATAAAGGAGGCAGAGT TTGTTAAGAGCAGCACATGCACAGCAGAGTGCCCGCCTCGTAAGCTTCCTGAGTTTGCAA TGGTTGGTCGCTCCAATGTTGGGAAATCATCGCTTATTAACTCTCTTGTGCAAAGAAAAG ATCTTGCTCTTACAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O81004 |
Definition |
sp|O81004|Y2287_ARATH GTP-binding protein At2g22870 OS=Arabidopsis thaliana |
Align length |
82 |
Score (bit) |
89.7 |
E-value |
8.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NMW0 |
Definition |
tr|A9NMW0|A9NMW0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
82 |
Score (bit) |
98.2 |
E-value |
3.0e-19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947753|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0016_O07, 5' (555 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NMW0|A9NMW0_PICSI Putative uncharacterized protein OS=Picea... 98 3e-19 tr|A7R1J2|A7R1J2_VITVI Chromosome undetermined scaffold_358, who... 94 5e-18 tr|B4FMS4|B4FMS4_MAIZE Putative uncharacterized protein OS=Zea m... 91 4e-17 tr|B4FAB3|B4FAB3_MAIZE GTP-binding protein OS=Zea mays PE=2 SV=1 91 4e-17 tr|B4FR01|B4FR01_MAIZE GTP-binding protein OS=Zea mays PE=2 SV=1 90 7e-17 tr|Q9LYE2|Q9LYE2_ARATH Putative GTP-binding protein (At5g11480/F... 89 1e-16 tr|Q8LBI3|Q8LBI3_ARATH Putative GTP-binding protein OS=Arabidops... 89 1e-16 tr|Q5JM78|Q5JM78_ORYSJ cDNA clone:J013111I12, full insert sequen... 89 1e-16 tr|B8A918|B8A918_ORYSI Putative uncharacterized protein OS=Oryza... 89 1e-16 tr|A7QZC8|A7QZC8_VITVI Chromosome chr7 scaffold_270, whole genom... 89 1e-16 tr|A2ZXJ0|A2ZXJ0_ORYSJ Putative uncharacterized protein OS=Oryza... 89 1e-16 tr|Q10PJ0|Q10PJ0_ORYSJ Os03g0232500 protein OS=Oryza sativa subs... 89 2e-16 tr|B8AJM6|B8AJM6_ORYSI Putative uncharacterized protein OS=Oryza... 89 2e-16 tr|A7P5C5|A7P5C5_VITVI Chromosome chr4 scaffold_6, whole genome ... 89 2e-16 tr|Q8S5X2|Q8S5X2_ORYSJ Putative nucleotide binding protein (Puta... 88 3e-16 tr|A9TCJ5|A9TCJ5_PHYPA Predicted protein OS=Physcomitrella paten... 80 9e-14 tr|A9RZH5|A9RZH5_PHYPA Predicted protein OS=Physcomitrella paten... 74 5e-12 tr|A9DJ76|A9DJ76_9FLAO GTP-binding protein OS=Kordia algicida OT... 69 2e-10 tr|A8J5L3|A8J5L3_CHLRE Predicted protein (Fragment) OS=Chlamydom... 68 4e-10 tr|A8J625|A8J625_CHLRE Predicted protein (Fragment) OS=Chlamydom... 66 1e-09 tr|A3XI70|A3XI70_9FLAO GTP-binding protein OS=Leeuwenhoekiella b... 65 2e-09 tr|A4ATM8|A4ATM8_9FLAO Putative GTP-binding protein OS=Flavobact... 65 2e-09 tr|A6ERB3|A6ERB3_9BACT GTP-binding protein OS=unidentified eubac... 65 3e-09 tr|A1ZMY0|A1ZMY0_9SPHI GTP-binding protein OS=Microscilla marina... 64 4e-09 tr|A8UJX1|A8UJX1_9FLAO GTP-binding protein OS=Flavobacteriales b... 63 9e-09 tr|B7BAQ7|B7BAQ7_9PORP Putative uncharacterized protein OS=Parab... 63 1e-08 tr|A4CPM0|A4CPM0_9FLAO Putative GTP-binding cell division protei... 63 1e-08 tr|A4BVZ0|A4BVZ0_9FLAO GTP-binding protein OS=Polaribacter irgen... 63 1e-08 tr|A7AGJ5|A7AGJ5_9PORP Putative uncharacterized protein OS=Parab... 62 2e-08 tr|A4SAW0|A4SAW0_OSTLU Predicted protein OS=Ostreococcus lucimar... 62 2e-08
>tr|A9NMW0|A9NMW0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 317
Score = 98.2 bits (243), Expect = 3e-19 Identities = 50/82 (60%), Positives = 59/82 (71%) Frame = +3
Query: 309 FIPPGAVFSPEKPLSKLPGSNIYLGPYARGGRIKEAEFVKSSTCTAECPPRKLPEFAMVG 488 FIPPG K LPGSNI +GPYA +IK+ EFVKSS +CP LPE AM+G Sbjct: 83 FIPPGVERDKIKAEMILPGSNIVVGPYAGDAKIKQVEFVKSSGRAKDCPKNALPEIAMMG 142
Query: 489 RSNVGKSSLINSLVQRKDLALT 554 RSNVGKSSLINSLV++KD+A+T Sbjct: 143 RSNVGKSSLINSLVRKKDVAMT 164
>tr|A7R1J2|A7R1J2_VITVI Chromosome undetermined scaffold_358, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00012216001 PE=4 SV=1 Length = 316
Score = 94.0 bits (232), Expect = 5e-18 Identities = 50/84 (59%), Positives = 62/84 (73%), Gaps = 2/84 (2%) Frame = +3
Query: 309 FIPPGAVFSPEKPLSK--LPGSNIYLGPYARGGRIKEAEFVKSSTCTAECPPRKLPEFAM 482 F+PPG PE+ LPGSNI LGPYA +IKE EFVKSS+ +CP PEFA+ Sbjct: 84 FVPPGV--DPEEVTDDMVLPGSNIVLGPYAGHAQIKEVEFVKSSSRPKDCPKDDRPEFAI 141
Query: 483 VGRSNVGKSSLINSLVQRKDLALT 554 +GRSNVGKSSLIN+LV++K++ALT Sbjct: 142 LGRSNVGKSSLINALVRKKEVALT 165
>tr|B4FMS4|B4FMS4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 354
Score = 90.9 bits (224), Expect = 4e-17 Identities = 52/87 (59%), Positives = 63/87 (72%), Gaps = 5/87 (5%) Frame = +3
Query: 309 FIPPGAVFSP--EKPLSK--LPGSNIYLGPYARG-GRIKEAEFVKSSTCTAECPPRKLPE 473 F+PPGA ++ +S L GSNI LGPYARG ++ A+FVKSS +CP LPE Sbjct: 73 FVPPGATMDAGDQEAVSARVLKGSNIVLGPYARGDAQVVNADFVKSSVRPDDCPRDGLPE 132
Query: 474 FAMVGRSNVGKSSLINSLVQRKDLALT 554 FA+VGRSNVGKSSL+NSLV+RK LALT Sbjct: 133 FALVGRSNVGKSSLLNSLVRRKRLALT 159
>tr|B4FAB3|B4FAB3_MAIZE GTP-binding protein OS=Zea mays PE=2 SV=1 Length = 313
Score = 90.9 bits (224), Expect = 4e-17 Identities = 52/87 (59%), Positives = 63/87 (72%), Gaps = 5/87 (5%) Frame = +3
Query: 309 FIPPGAVFSP--EKPLSK--LPGSNIYLGPYARG-GRIKEAEFVKSSTCTAECPPRKLPE 473 F+PPGA ++ +S L GSNI LGPYARG ++ A+FVKSS +CP LPE Sbjct: 73 FVPPGATMDAGDQEAVSARVLKGSNIVLGPYARGDAQVVNADFVKSSVRPDDCPRDGLPE 132
Query: 474 FAMVGRSNVGKSSLINSLVQRKDLALT 554 FA+VGRSNVGKSSL+NSLV+RK LALT Sbjct: 133 FALVGRSNVGKSSLLNSLVRRKRLALT 159
>tr|B4FR01|B4FR01_MAIZE GTP-binding protein OS=Zea mays PE=2 SV=1 Length = 308
Score = 90.1 bits (222), Expect = 7e-17 Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 1/83 (1%) Frame = +3
Query: 309 FIPPGAVFSPEKPLSK-LPGSNIYLGPYARGGRIKEAEFVKSSTCTAECPPRKLPEFAMV 485 F+PPG P +PGSNI +GPYA R+K AEFVKSS +CP PEFA++ Sbjct: 72 FLPPGVERDALVPADMVIPGSNIVVGPYAGDARVKGAEFVKSSARARDCPNDDRPEFAVL 131
Query: 486 GRSNVGKSSLINSLVQRKDLALT 554 GRSNVGKSSLIN+L +RK+ ALT Sbjct: 132 GRSNVGKSSLINALTRRKEAALT 154
>tr|Q9LYE2|Q9LYE2_ARATH Putative GTP-binding protein (At5g11480/F15N18_70) OS=Arabidopsis thaliana GN=F15N18_70 PE=2 SV=1 Length = 318
Score = 89.4 bits (220), Expect = 1e-16 Identities = 50/86 (58%), Positives = 59/86 (68%), Gaps = 4/86 (4%) Frame = +3
Query: 309 FIPPGAVFSPEKPLSK----LPGSNIYLGPYARGGRIKEAEFVKSSTCTAECPPRKLPEF 476 FIPP S E S L GSNI L YAR ++ +A++VKSS T +CP LPEF Sbjct: 79 FIPPETDISGEDSASLTTRILKGSNIVLSKYARDAQVVQADYVKSSVKTEDCPADGLPEF 138
Query: 477 AMVGRSNVGKSSLINSLVQRKDLALT 554 A+VGRSNVGKSSL+NSLV+RK LALT Sbjct: 139 ALVGRSNVGKSSLLNSLVRRKRLALT 164
>tr|Q8LBI3|Q8LBI3_ARATH Putative GTP-binding protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 318
Score = 89.4 bits (220), Expect = 1e-16 Identities = 50/86 (58%), Positives = 59/86 (68%), Gaps = 4/86 (4%) Frame = +3
Query: 309 FIPPGAVFSPEKPLSK----LPGSNIYLGPYARGGRIKEAEFVKSSTCTAECPPRKLPEF 476 FIPP S E S L GSNI L YAR ++ +A++VKSS T +CP LPEF Sbjct: 79 FIPPETDISGEDSASLTTRILKGSNIVLSKYARDAQVVQADYVKSSVKTEDCPADGLPEF 138
Query: 477 AMVGRSNVGKSSLINSLVQRKDLALT 554 A+VGRSNVGKSSL+NSLV+RK LALT Sbjct: 139 ALVGRSNVGKSSLLNSLVRRKRLALT 164
>tr|Q5JM78|Q5JM78_ORYSJ cDNA clone:J013111I12, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBb0036G09.5 PE=2 SV=1 Length = 316
Score = 89.4 bits (220), Expect = 1e-16 Identities = 53/87 (60%), Positives = 62/87 (71%), Gaps = 5/87 (5%) Frame = +3
Query: 309 FIPPGAVFSP---EKPLSK-LPGSNIYLGPYARG-GRIKEAEFVKSSTCTAECPPRKLPE 473 F+PPGA S E ++ L GSNI LGPYARG + A+FVKSS +CP LPE Sbjct: 76 FVPPGASVSAGDAEAVTARVLKGSNIVLGPYARGDANVIAADFVKSSVRPDDCPRDGLPE 135
Query: 474 FAMVGRSNVGKSSLINSLVQRKDLALT 554 FA+VGRSNVGKSSL+NSLV+RK LALT Sbjct: 136 FALVGRSNVGKSSLLNSLVRRKRLALT 162
>tr|B8A918|B8A918_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03633 PE=4 SV=1 Length = 344
Score = 89.4 bits (220), Expect = 1e-16 Identities = 53/87 (60%), Positives = 62/87 (71%), Gaps = 5/87 (5%) Frame = +3
Query: 309 FIPPGAVFSP---EKPLSK-LPGSNIYLGPYARG-GRIKEAEFVKSSTCTAECPPRKLPE 473 F+PPGA S E ++ L GSNI LGPYARG + A+FVKSS +CP LPE Sbjct: 76 FVPPGASVSAGDAEAVTARVLKGSNIVLGPYARGDANVIAADFVKSSVRPDDCPRDGLPE 135
Query: 474 FAMVGRSNVGKSSLINSLVQRKDLALT 554 FA+VGRSNVGKSSL+NSLV+RK LALT Sbjct: 136 FALVGRSNVGKSSLLNSLVRRKRLALT 162
>tr|A7QZC8|A7QZC8_VITVI Chromosome chr7 scaffold_270, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010593001 PE=4 SV=1 Length = 219
Score = 89.4 bits (220), Expect = 1e-16 Identities = 44/66 (66%), Positives = 54/66 (81%) Frame = +3
Query: 357 LPGSNIYLGPYARGGRIKEAEFVKSSTCTAECPPRKLPEFAMVGRSNVGKSSLINSLVQR 536 LPGSNI LGPYA +IKE EFVKSS+ +CP PEFA++GRSNVGKSSLIN+LV++ Sbjct: 3 LPGSNIVLGPYAGHAQIKEVEFVKSSSRPKDCPKDDRPEFAILGRSNVGKSSLINALVRK 62
Query: 537 KDLALT 554 K++ALT Sbjct: 63 KEVALT 68
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