DK947766 |
Clone id |
YMU02A01NGRL0016_O24 |
Library |
YMU02 |
Length |
422 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0016_O24. 5' end sequence. |
Accession |
DK947766 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL72Contig2 |
Sequence |
GGAGGAGCTGGACCTGGTCCTGTACCAATTAGTGGTCCTAGACCATCCCCTACCAAGTTG CAGTCATATATTATGTCTATTGACAAGGATATGCTTCAAAGGATTGCAACAGTTCGGTCG GGCGAGAGCCTTAGGGTACTTGAGAAACATACAGAGGCTCTGTTTGGGCGACCAGAAGTC GTTATATCTCCGGATGGATCCATGAAGGTTGCAAAGGATGATGTGATGAAAATCAGCTTT GCAGGGTTGAAGCACCTAGTCCTTGAAGCTGTCGCATTTGGCAGTTTCTTATGGGATGTC GAATGCTATGTAGATGCGTCTTACGCTTTTGTATGATTTGCATGAACAGTGCATCCAGCT TTTCAAAATTCTATTGTTAATGTGCATAAGTGCGAAAAAAAAAAAAAAAAAAAAAAAAAA AA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P39935 |
Definition |
sp|P39935|IF4F1_YEAST Eukaryotic initiation factor 4F subunit p150 OS=Saccharomyces cerevisiae |
Align length |
70 |
Score (bit) |
32.3 |
E-value |
0.75 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QTZ7 |
Definition |
tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
111 |
Score (bit) |
131.0 |
E-value |
2.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947766|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0016_O24, 5' (394 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 131 2e-29 tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 130 3e-29 tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 130 3e-29 tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 130 3e-29 tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 130 3e-29 tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 130 3e-29 tr|Q9AT51|Q9AT51_BRANA Putative uncharacterized protein (Fragmen... 129 6e-29 tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 127 4e-28 tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 125 8e-28 tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 125 1e-27 tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 125 1e-27 tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 125 1e-27 tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 125 1e-27 tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 125 1e-27 tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 122 7e-27 tr|Q14K79|Q14K79_PLAAC Putative uncharacterized protein (Fragmen... 122 1e-26 tr|A5BZG6|A5BZG6_VITVI Putative uncharacterized protein OS=Vitis... 120 4e-26 tr|Q56ZA5|Q56ZA5_ARATH Putative uncharacterized protein At3g1780... 118 1e-25 tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 115 1e-24 tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 112 1e-23 tr|A5AE17|A5AE17_VITVI Putative uncharacterized protein OS=Vitis... 112 1e-23 tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 110 5e-23 tr|Q9FVR1|Q9FVR1_ARATH Putative uncharacterized protein F3C3.6 (... 106 7e-22 tr|B8LKC1|B8LKC1_PICSI Putative uncharacterized protein OS=Picea... 106 7e-22 tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 105 1e-21 tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 105 1e-21 tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 105 1e-21 tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 99 1e-19 tr|A6N1R0|A6N1R0_ORYSI Putative uncharacterized protein (Fragmen... 96 7e-19 tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 94 4e-18
>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006608001 PE=4 SV=1 Length = 362
Score = 131 bits (329), Expect = 2e-29 Identities = 63/111 (56%), Positives = 85/111 (76%) Frame = +1
Query: 1 GGAGPGPVPISGPRPSPTKLQSYIMSIDKDMLQRIATVRSGESLRVLEKHTEALFGRPEV 180 GG PG G P++L++Y+MS D + LQR AT+RS E++ ++EKHTEALFGRPE+ Sbjct: 253 GGFTPGGF---GHGIKPSRLRNYVMSFDAETLQRYATIRSKEAVSIIEKHTEALFGRPEI 309
Query: 181 VISPDGSMKVAKDDVMKISFAGLKHLVLEAVAFGSFLWDVECYVDASYAFV 333 +I+P G++ +KD+++KISF GLK LVLEAV FGSFLWDVE +VD+ Y FV Sbjct: 310 IITPQGTIDSSKDELIKISFGGLKRLVLEAVTFGSFLWDVESFVDSRYHFV 360
>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 130 bits (327), Expect = 3e-29 Identities = 60/100 (60%), Positives = 81/100 (81%) Frame = +1
Query: 34 GPRPSPTKLQSYIMSIDKDMLQRIATVRSGESLRVLEKHTEALFGRPEVVISPDGSMKVA 213 G P++L+SY+MS D + LQR AT+RS E++ ++EKHTEALFG+PE+VI+P+G++ + Sbjct: 320 GSEIKPSRLRSYVMSFDAETLQRYATIRSREAVGIIEKHTEALFGKPEIVITPEGTVDSS 379
Query: 214 KDDVMKISFAGLKHLVLEAVAFGSFLWDVECYVDASYAFV 333 KD+ +KISF G+K LVLEAV FGSFLWDVE +VDA Y FV Sbjct: 380 KDEQIKISFGGMKRLVLEAVTFGSFLWDVESHVDARYHFV 419
>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800; MEB5.2 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1 Length = 421
Score = 130 bits (327), Expect = 3e-29 Identities = 60/100 (60%), Positives = 81/100 (81%) Frame = +1
Query: 34 GPRPSPTKLQSYIMSIDKDMLQRIATVRSGESLRVLEKHTEALFGRPEVVISPDGSMKVA 213 G P++L+SY+MS D + LQR AT+RS E++ ++EKHTEALFG+PE+VI+P+G++ + Sbjct: 320 GSEIKPSRLRSYVMSFDAETLQRYATIRSREAVGIIEKHTEALFGKPEIVITPEGTVDSS 379
Query: 214 KDDVMKISFAGLKHLVLEAVAFGSFLWDVECYVDASYAFV 333 KD+ +KISF G+K LVLEAV FGSFLWDVE +VDA Y FV Sbjct: 380 KDEQIKISFGGMKRLVLEAVTFGSFLWDVESHVDARYHFV 419
>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800 OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 130 bits (327), Expect = 3e-29 Identities = 60/100 (60%), Positives = 81/100 (81%) Frame = +1
Query: 34 GPRPSPTKLQSYIMSIDKDMLQRIATVRSGESLRVLEKHTEALFGRPEVVISPDGSMKVA 213 G P++L+SY+MS D + LQR AT+RS E++ ++EKHTEALFG+PE+VI+P+G++ + Sbjct: 320 GSEIKPSRLRSYVMSFDAETLQRYATIRSREAVGIIEKHTEALFGKPEIVITPEGTVDSS 379
Query: 214 KDDVMKISFAGLKHLVLEAVAFGSFLWDVECYVDASYAFV 333 KD+ +KISF G+K LVLEAV FGSFLWDVE +VDA Y FV Sbjct: 380 KDEQIKISFGGMKRLVLEAVTFGSFLWDVESHVDARYHFV 419
>tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 424
Score = 130 bits (327), Expect = 3e-29 Identities = 62/102 (60%), Positives = 82/102 (80%), Gaps = 2/102 (1%) Frame = +1
Query: 34 GPRPS--PTKLQSYIMSIDKDMLQRIATVRSGESLRVLEKHTEALFGRPEVVISPDGSMK 207 GP S P +L+SY+MS D D LQR ATVRS E+ ++EKHTEALFG+PE+VI+P+G++ Sbjct: 321 GPSQSIKPCRLRSYVMSFDSDTLQRYATVRSKEAFGIIEKHTEALFGKPEIVITPEGTLD 380
Query: 208 VAKDDVMKISFAGLKHLVLEAVAFGSFLWDVECYVDASYAFV 333 +KD+ ++ISFAGL+ L+LEAV FGSFLWDVE +VD+ Y FV Sbjct: 381 SSKDEHIRISFAGLRRLILEAVTFGSFLWDVESFVDSRYHFV 422
>tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 423
Score = 130 bits (327), Expect = 3e-29 Identities = 62/102 (60%), Positives = 82/102 (80%), Gaps = 2/102 (1%) Frame = +1
Query: 34 GPRPS--PTKLQSYIMSIDKDMLQRIATVRSGESLRVLEKHTEALFGRPEVVISPDGSMK 207 GP S P +L+SY+MS D D LQR ATVRS E+ ++EKHTEALFG+PE+VI+P+G++ Sbjct: 320 GPSQSIKPCRLRSYVMSFDSDTLQRYATVRSKEAFGIIEKHTEALFGKPEIVITPEGTLD 379
Query: 208 VAKDDVMKISFAGLKHLVLEAVAFGSFLWDVECYVDASYAFV 333 +KD+ ++ISFAGL+ L+LEAV FGSFLWDVE +VD+ Y FV Sbjct: 380 SSKDEHIRISFAGLRRLILEAVTFGSFLWDVESFVDSRYHFV 421
>tr|Q9AT51|Q9AT51_BRANA Putative uncharacterized protein (Fragment) OS=Brassica napus PE=2 SV=1 Length = 256
Score = 129 bits (325), Expect = 6e-29 Identities = 59/100 (59%), Positives = 81/100 (81%) Frame = +1
Query: 34 GPRPSPTKLQSYIMSIDKDMLQRIATVRSGESLRVLEKHTEALFGRPEVVISPDGSMKVA 213 G P++L++Y+MS D + LQR AT+RS E++ ++EKHTEALFG+PE+VI+P+G++ + Sbjct: 155 GSEIKPSRLRTYVMSFDSETLQRYATIRSREAVGIIEKHTEALFGKPEIVITPEGTVDSS 214
Query: 214 KDDVMKISFAGLKHLVLEAVAFGSFLWDVECYVDASYAFV 333 KD+ +KISF G+K LVLEAV FGSFLWDVE +VDA Y FV Sbjct: 215 KDEQIKISFGGMKRLVLEAVTFGSFLWDVESHVDARYHFV 254
>tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 417
Score = 127 bits (318), Expect = 4e-28 Identities = 62/111 (55%), Positives = 81/111 (72%) Frame = +1
Query: 1 GGAGPGPVPISGPRPSPTKLQSYIMSIDKDMLQRIATVRSGESLRVLEKHTEALFGRPEV 180 GG PG G ++L++Y+MS D + LQR AT+RS E++ ++EKHTEALFGRPE+ Sbjct: 308 GGISPGGF---GHGLKASRLRNYVMSFDAETLQRYATIRSKEAVSIIEKHTEALFGRPEI 364
Query: 181 VISPDGSMKVAKDDVMKISFAGLKHLVLEAVAFGSFLWDVECYVDASYAFV 333 VI+P G++ +KD+V+ IS GLK L LEAV FGSFLWDVE YVD+ Y FV Sbjct: 365 VITPQGTIDTSKDEVVTISLGGLKRLALEAVTFGSFLWDVESYVDSRYHFV 415
>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana GN=At1g48450 PE=2 SV=1 Length = 423
Score = 125 bits (315), Expect = 8e-28 Identities = 59/94 (62%), Positives = 78/94 (82%) Frame = +1
Query: 52 TKLQSYIMSIDKDMLQRIATVRSGESLRVLEKHTEALFGRPEVVISPDGSMKVAKDDVMK 231 ++L++Y+MS D + LQR AT+RS ES+ ++EKHTEALFGRPE+VI+P G++ +KD+ +K Sbjct: 328 SRLKTYVMSFDGETLQRYATIRSRESVGIIEKHTEALFGRPEIVITPQGTIDSSKDEHIK 387
Query: 232 ISFAGLKHLVLEAVAFGSFLWDVECYVDASYAFV 333 ISF GLK LVLEAV FGSFLWDVE +VD+ Y FV Sbjct: 388 ISFKGLKRLVLEAVTFGSFLWDVESHVDSRYHFV 421
>tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subsp. japonica GN=Os03g0717900 PE=2 SV=1 Length = 455
Score = 125 bits (314), Expect = 1e-27 Identities = 59/102 (57%), Positives = 80/102 (78%), Gaps = 2/102 (1%) Frame = +1
Query: 34 GPRPS--PTKLQSYIMSIDKDMLQRIATVRSGESLRVLEKHTEALFGRPEVVISPDGSMK 207 GP S P +L+SY+MS D + LQ AT+RS E+ ++EKHTEALFG+PE+VI+P+G++ Sbjct: 352 GPSQSVKPCRLRSYVMSFDSETLQSYATIRSKEAFGIIEKHTEALFGKPEIVITPEGTVD 411
Query: 208 VAKDDVMKISFAGLKHLVLEAVAFGSFLWDVECYVDASYAFV 333 +KD+ ++ISFAGL+ L+LEAV FGSFLWDVE +VD Y FV Sbjct: 412 SSKDEHVRISFAGLRRLILEAVTFGSFLWDVESFVDTRYHFV 453
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