DK947791
Clone id YMU02A01NGRM0001_A06
Library
Length 358
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRM0001_A06. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TAGTCTGGATAGGCGTCCTCTGCGACGGACCGGGCCCAAGTCCCCTGTAAAGGGGCGTCT
GAGAGGGTGAGAGCCCCGTCGAGCTCGTACCCTGTCGCTCCACGAGGCGCCGTCGACGAG
TCGGGCTGTTTGGGAATGCACCCCTATGTGGGTGGTATATTCCATCCAAGGTTGAATACG
GGCAAGAGACCGATAGCGAACAAGTACCGCGAGGGATAGATGAAAAGGACTTTGAAAAAT
AAAGATTGAATTCTAACAAAAAAACAATGTCGGCCGCCTCGCCCCTCGATTAATCTTTCT
ATACCATTCGTTTGGTGCGGGGGTCCCTGAGGTTATTGAACGTGGTCATAGCTGTTTC
■■Homology search results ■■ -
sp_hit_id Q6CQE5
Definition sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis
Align length 80
Score (bit) 73.2
E-value 4.0e-13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947791|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_A06, 5'
(341 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis GN=TAR... 73 4e-13
sp|Q8TGM6|TAR1_YEAST Protein TAR1 OS=Saccharomyces cerevisiae GN... 70 4e-12
sp|Q02078|MEF2A_HUMAN Myocyte-specific enhancer factor 2A OS=Hom... 35 0.089
sp|P98203|ARVC_MOUSE Armadillo repeat protein deleted in velo-ca... 33 0.58
sp|Q0CA78|INO80_ASPTN Putative DNA helicase ino80 OS=Aspergillus... 32 0.75
sp|Q5B3C8|NST1_EMENI Stress response protein nst1 OS=Emericella ... 32 1.3
sp|Q60929|MEF2A_MOUSE Myocyte-specific enhancer factor 2A OS=Mus... 30 2.9
sp|P15136|E3B14_ADE07 Early E3B 14.9 kDa protein OS=Human adenov... 30 2.9
sp|P11316|E3B14_ADE03 Early E3B 14.5 kDa protein OS=Human adenov... 30 2.9
sp|O83940|Y975_TREPA UPF0011 protein TP_0975 OS=Treponema pallid... 30 4.9
sp|Q9QX47|SON_MOUSE SON protein OS=Mus musculus GN=Son PE=1 SV=1 29 6.4
sp|Q09436|MEX6_CAEEL Zinc finger protein mex-6 OS=Caenorhabditis... 29 6.4
sp|Q99704|DOK1_HUMAN Docking protein 1 OS=Homo sapiens GN=DOK1 P... 29 6.4
sp|P30459|1A74_HUMAN HLA class I histocompatibility antigen, A-7... 29 6.4
sp|P30450|1A26_HUMAN HLA class I histocompatibility antigen, A-2... 29 8.3

>sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis GN=TAR1-A
PE=4 SV=2
Length = 109

Score = 73.2 bits (178), Expect = 4e-13
Identities = 39/80 (48%), Positives = 44/80 (55%)
Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGL 71
F FSK FSS TCSLSVS Y LDGIYHP R AFPN+ TRR+ TG
Sbjct: 15 FFTLFSKFFSSFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTRRKHFTNNWDPRHTGF 74

Query: 70 SPSQTPLYRGLGPGPSQRTP 11
SPS T + GP+ + P
Sbjct: 75 SPSMTSCSKEHRQGPATKLP 94


>sp|Q8TGM6|TAR1_YEAST Protein TAR1 OS=Saccharomyces cerevisiae
GN=TAR1 PE=2 SV=1
Length = 124

Score = 69.7 bits (169), Expect = 4e-12
Identities = 38/80 (47%), Positives = 44/80 (55%)
Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGL 71
F FSK FSS TCSLSVS Y LDGIYHP R AFPN+ T RR + + TG
Sbjct: 30 FFTLFSKFFSSFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTLRRHFTKNRTPRHTGF 89

Query: 70 SPSQTPLYRGLGPGPSQRTP 11
SPS T + G + + P
Sbjct: 90 SPSMTSCSKEHRQGTAPKLP 109


>sp|Q02078|MEF2A_HUMAN Myocyte-specific enhancer factor 2A OS=Homo
sapiens GN=MEF2A PE=1 SV=1
Length = 507

Score = 35.4 bits (80), Expect = 0.089
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = -2

Query: 217 IPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGLSPSQTPLYRGL 38
+P S+SV+ P ++ + + + + G+ SP+ T S+ LSP QT L+R +
Sbjct: 135 LPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLA---ASSTLTDSSMLSPPQTTLHRNV 191

Query: 37 GPGPSQRTP 11
PG QR P
Sbjct: 192 SPGAPQRPP 200


>sp|P98203|ARVC_MOUSE Armadillo repeat protein deleted in
velo-cardio-facial syndrome homolog OS=Mus musculus
GN=Arvcf PE=1 SV=2
Length = 962

Score = 32.7 bits (73), Expect = 0.58
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -2

Query: 181 PYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGLS--PSQTPLYRGLGPGP 26
P +TL YH G FP+ P R + G+ S GL P +T L LGPGP
Sbjct: 176 PAATLSRTYHSSGGGFPDGPESRD--IPSYGSLSRGLGVRPPRTGL---LGPGP 224


>sp|Q0CA78|INO80_ASPTN Putative DNA helicase ino80 OS=Aspergillus
terreus (strain NIH 2624) GN=ino80 PE=3 SV=1
Length = 1690

Score = 32.3 bits (72), Expect = 0.75
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -2

Query: 172 TLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGLSPSQTPL-----YRGLGPGPSQR 17
TLD +YH G F ++ + T+ G +PS TP+ RG G G S+R
Sbjct: 1614 TLDDMYHEGEGNFDDASAKPSGAATPVSTADVGGTPSSTPVPKRGRGRGTGKGTSKR 1670


>sp|Q5B3C8|NST1_EMENI Stress response protein nst1 OS=Emericella
nidulans GN=nst1 PE=3 SV=1
Length = 1125

Score = 31.6 bits (70), Expect = 1.3
Identities = 26/65 (40%), Positives = 27/65 (41%)
Frame = -2

Query: 220 SIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGLSPSQTPLYRG 41
S P S S Y + I HPH GA P SP R T GLSPS P G
Sbjct: 697 SAPLSQSSGSSIPKYGSGHPILHPHPGA-PMSPLGR--------THPPGLSPSNPPGLSG 747

Query: 40 LGPGP 26
L P P
Sbjct: 748 LVPRP 752


>sp|Q60929|MEF2A_MOUSE Myocyte-specific enhancer factor 2A OS=Mus
musculus GN=Mef2a PE=1 SV=2
Length = 498

Score = 30.4 bits (67), Expect = 2.9
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = -2

Query: 238 FSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGLSPSQ 59
F + +P S+SV+ P ++ + + + + G+ SP+ S+ LSP
Sbjct: 126 FKRGPPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLA---ASSTLADSSMLSPPP 182

Query: 58 TPLYRGLGPGPSQRTP 11
L+R + PG QR P
Sbjct: 183 ATLHRNVSPGAPQRPP 198


>sp|P15136|E3B14_ADE07 Early E3B 14.9 kDa protein OS=Human
adenovirus B serotype 7 PE=3 SV=1
Length = 134

Score = 30.4 bits (67), Expect = 2.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1

Query: 200 FAIGLLPVFNLGWNIPPT*GCIPKQPD 120
F+I + P FN GWN P G P++PD
Sbjct: 70 FSITIYPTFNFGWNSPNALG-YPQEPD 95


>sp|P11316|E3B14_ADE03 Early E3B 14.5 kDa protein OS=Human
adenovirus B serotype 3 PE=3 SV=1
Length = 134

Score = 30.4 bits (67), Expect = 2.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1

Query: 200 FAIGLLPVFNLGWNIPPT*GCIPKQPD 120
F+I + P FN GWN P G P++PD
Sbjct: 70 FSITIYPTFNFGWNSPNALG-YPQEPD 95


>sp|O83940|Y975_TREPA UPF0011 protein TP_0975 OS=Treponema pallidum
GN=TP_0975 PE=3 SV=1
Length = 274

Score = 29.6 bits (65), Expect = 4.9
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -3

Query: 153 THIGVHSQTARLVDGASWSDRVRARRGSHPLRRPFTGDLGPVRRRGRLS 7
+H G+H RLV + ++ ARR H L P + L P + RGR S
Sbjct: 44 SHFGIHK---RLVSCRAHNEAQAARRLIHFLSTPISAFLSPEKGRGRQS 89


tr_hit_id A5BKB8
Definition tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 80
Score (bit) 114.0
E-value 2.0e-24
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947791|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_A06, 5'
(341 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis... 114 2e-24
tr|A7TAG1|A7TAG1_NEMVE Predicted protein (Fragment) OS=Nematoste... 84 3e-15
tr|A7T248|A7T248_NEMVE Predicted protein (Fragment) OS=Nematoste... 79 1e-13
tr|A7TCL2|A7TCL2_NEMVE Predicted protein (Fragment) OS=Nematoste... 77 6e-13
tr|A7SWL7|A7SWL7_NEMVE Predicted protein (Fragment) OS=Nematoste... 76 1e-12
tr|A7SUL8|A7SUL8_NEMVE Predicted protein (Fragment) OS=Nematoste... 76 1e-12
tr|A7SPY6|A7SPY6_NEMVE Predicted protein (Fragment) OS=Nematoste... 74 4e-12
tr|A8DVI0|A8DVI0_NEMVE Predicted protein (Fragment) OS=Nematoste... 74 5e-12
tr|A7SQ02|A7SQ02_NEMVE Predicted protein (Fragment) OS=Nematoste... 71 3e-11
tr|A7S3R0|A7S3R0_NEMVE Predicted protein (Fragment) OS=Nematoste... 71 3e-11
tr|A7T1X8|A7T1X8_NEMVE Predicted protein (Fragment) OS=Nematoste... 68 3e-10
tr|A8DWE6|A8DWE6_NEMVE Predicted protein (Fragment) OS=Nematoste... 67 4e-10
tr|A9TBN2|A9TBN2_PHYPA Predicted protein (Fragment) OS=Physcomit... 65 2e-09
tr|Q3KTL6|Q3KTL6_SCHJA SJCHGC01393 protein OS=Schistosoma japoni... 56 1e-06
tr|B1N5S6|B1N5S6_ENTHI Putative uncharacterized protein OS=Entam... 55 2e-06
tr|A8NLF8|A8NLF8_BRUMA Putative uncharacterized protein (Fragmen... 55 2e-06
tr|A5AFX7|A5AFX7_VITVI Putative uncharacterized protein OS=Vitis... 53 9e-06
tr|Q223Q7|Q223Q7_TETTH Putative uncharacterized protein OS=Tetra... 49 1e-04
tr|Q6Z8F0|Q6Z8F0_ORYSJ Putative uncharacterized protein P0459B01... 48 3e-04
tr|A5B938|A5B938_VITVI Putative uncharacterized protein OS=Vitis... 42 0.015
tr|A8PGP3|A8PGP3_BRUMA Putative uncharacterized protein OS=Brugi... 40 0.058
tr|Q9W6U8|Q9W6U8_CHICK MEF2A protein OS=Gallus gallus GN=MEF2A P... 39 0.099
tr|Q57T06|Q57T06_SALCH Putative uncharacterized protein OS=Salmo... 39 0.17
tr|A4ECR2|A4ECR2_9ACTN Putative uncharacterized protein OS=Colli... 39 0.17
tr|Q652R5|Q652R5_ORYSJ Putative uncharacterized protein P0603C10... 28 0.59
tr|Q5REW7|Q5REW7_PONAB Putative uncharacterized protein DKFZp469... 37 0.64
tr|Q7Z6C9|Q7Z6C9_HUMAN MEF2A protein OS=Homo sapiens GN=MEF2A PE... 37 0.64
tr|Q59GX4|Q59GX4_HUMAN MADS box transcription enhancer factor 2,... 37 0.64
tr|B4DFQ7|B4DFQ7_HUMAN cDNA FLJ50129, highly similar to Myocyte-... 37 0.64
tr|A8K720|A8K720_HUMAN cDNA FLJ75040, highly similar to Homo sap... 37 0.64

>tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_001840 PE=4 SV=1
Length = 347

Score = 114 bits (285), Expect = 2e-24
Identities = 60/80 (75%), Positives = 62/80 (77%)
Frame = +1

Query: 4 SG*ASSATDRAQVPCKGASERVRAPSSSYPVAPRGAVDESGCLGMHPYVGGIFHPRLNTG 183
SG ASSA DRAQVP KGA ERVRAPS PVAPRGAV ESGC GM GG F PRLNTG
Sbjct: 264 SGEASSAADRAQVPXKGAPERVRAPSCPDPVAPRGAVGESGCXGMQXQSGGKFRPRLNTG 323

Query: 184 KRPIANKYREG*MKRTLKNK 243
+RPIANK REG MKRTLK +
Sbjct: 324 ERPIANKCREGKMKRTLKTE 343


>tr|A7TAG1|A7TAG1_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g152336 PE=4 SV=1
Length = 130

Score = 84.3 bits (207), Expect = 3e-15
Identities = 41/72 (56%), Positives = 47/72 (65%)
Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGL 71
F FSK FSS P GTCSLSVSC Y LDG+YHP AFPN+PTRR+ +V + GL
Sbjct: 25 FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIVNGRDRRRXGL 84

Query: 70 SPSQTPLYRGLG 35
SPS T + LG
Sbjct: 85 SPSTTCCSKQLG 96


>tr|A7T248|A7T248_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g76701 PE=4 SV=1
Length = 70

Score = 79.0 bits (193), Expect = 1e-13
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGL 71
F FSK FSS P GTCSLSVSC Y LDG+YHP AFPN+PTRR+ +V +G G
Sbjct: 9 FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIVNDRGRRRRGF 68

Query: 70 SP 65
P
Sbjct: 69 HP 70


>tr|A7TCL2|A7TCL2_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g69522 PE=4 SV=1
Length = 67

Score = 76.6 bits (187), Expect = 6e-13
Identities = 35/59 (59%), Positives = 40/59 (67%)
Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTG 74
F FSK FSS P GTCSLSVSC Y LDG+YHP AFPN+PTRR+ +V +G G
Sbjct: 9 FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIVNGRGRRRRG 67


>tr|A7SWL7|A7SWL7_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g67728 PE=4 SV=1
Length = 76

Score = 75.9 bits (185), Expect = 1e-12
Identities = 35/62 (56%), Positives = 40/62 (64%)
Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGL 71
F FSK FSS P GTCSLSVSC Y LDG+Y P AFPN+PTRR+ +V +G G
Sbjct: 15 FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYQPFWAAFPNNPTRRKHIVNGRGRRRRGF 74

Query: 70 SP 65
P
Sbjct: 75 HP 76


>tr|A7SUL8|A7SUL8_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g76780 PE=4 SV=1
Length = 70

Score = 75.9 bits (185), Expect = 1e-12
Identities = 35/62 (56%), Positives = 40/62 (64%)
Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGL 71
F FSK FSS P GTCSLSVSC Y LDG+YHP AFPN+PTRR+ +V + G
Sbjct: 9 FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIVNGRDRRRRGC 68

Query: 70 SP 65
P
Sbjct: 69 HP 70


>tr|A7SPY6|A7SPY6_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g153457 PE=4 SV=1
Length = 59

Score = 73.9 bits (180), Expect = 4e-12
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLV 101
F FSK FSS P GTCSLSVSC Y LDG+YHP AFPN+PTRR+ +V
Sbjct: 9 FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 58


>tr|A8DVI0|A8DVI0_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g156477 PE=4 SV=1
Length = 60

Score = 73.6 bits (179), Expect = 5e-12
Identities = 33/48 (68%), Positives = 36/48 (75%)
Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRR 107
F FSK FSS P GTCSLSVSC Y LDG+YHP AFPN+PTRR+R
Sbjct: 9 FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKR 56


>tr|A7SQ02|A7SQ02_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g126693 PE=4 SV=1
Length = 54

Score = 70.9 bits (172), Expect = 3e-11
Identities = 32/46 (69%), Positives = 34/46 (73%)
Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRR 113
F FSK FSS P GTCSLSVSC Y LDG+YHP AFPN+PTRR
Sbjct: 9 FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRR 54


>tr|A7S3R0|A7S3R0_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g103339 PE=4 SV=1
Length = 61

Score = 70.9 bits (172), Expect = 3e-11
Identities = 32/46 (69%), Positives = 34/46 (73%)
Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRR 113
F FSK FSS P GTCSLSVSC Y LDG+YHP AFPN+PTRR
Sbjct: 9 FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRR 54