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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947791
Clone id YMU02A01NGRM0001_A06
Library
Length 358
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRM0001_A06. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
TAGTCTGGATAGGCGTCCTCTGCGACGGACCGGGCCCAAGTCCCCTGTAAAGGGGCGTCT
GAGAGGGTGAGAGCCCCGTCGAGCTCGTACCCTGTCGCTCCACGAGGCGCCGTCGACGAG
TCGGGCTGTTTGGGAATGCACCCCTATGTGGGTGGTATATTCCATCCAAGGTTGAATACG
GGCAAGAGACCGATAGCGAACAAGTACCGCGAGGGATAGATGAAAAGGACTTTGAAAAAT
AAAGATTGAATTCTAACAAAAAAACAATGTCGGCCGCCTCGCCCCTCGATTAATCTTTCT
ATACCATTCGTTTGGTGCGGGGGTCCCTGAGGTTATTGAACGTGGTCATAGCTGTTTC
■■Homology search results ■■ -
sp_hit_id Q6CQE5
Definition sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis
Align length 80
Score (bit) 73.2
E-value 4.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947791|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_A06, 5'
         (341 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis GN=TAR...    73   4e-13
sp|Q8TGM6|TAR1_YEAST Protein TAR1 OS=Saccharomyces cerevisiae GN...    70   4e-12
sp|Q02078|MEF2A_HUMAN Myocyte-specific enhancer factor 2A OS=Hom...    35   0.089
sp|P98203|ARVC_MOUSE Armadillo repeat protein deleted in velo-ca...    33   0.58 
sp|Q0CA78|INO80_ASPTN Putative DNA helicase ino80 OS=Aspergillus...    32   0.75 
sp|Q5B3C8|NST1_EMENI Stress response protein nst1 OS=Emericella ...    32   1.3  
sp|Q60929|MEF2A_MOUSE Myocyte-specific enhancer factor 2A OS=Mus...    30   2.9  
sp|P15136|E3B14_ADE07 Early E3B 14.9 kDa protein OS=Human adenov...    30   2.9  
sp|P11316|E3B14_ADE03 Early E3B 14.5 kDa protein OS=Human adenov...    30   2.9  
sp|O83940|Y975_TREPA UPF0011 protein TP_0975 OS=Treponema pallid...    30   4.9  
sp|Q9QX47|SON_MOUSE SON protein OS=Mus musculus GN=Son PE=1 SV=1       29   6.4  
sp|Q09436|MEX6_CAEEL Zinc finger protein mex-6 OS=Caenorhabditis...    29   6.4  
sp|Q99704|DOK1_HUMAN Docking protein 1 OS=Homo sapiens GN=DOK1 P...    29   6.4  
sp|P30459|1A74_HUMAN HLA class I histocompatibility antigen, A-7...    29   6.4  
sp|P30450|1A26_HUMAN HLA class I histocompatibility antigen, A-2...    29   8.3  

>sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis GN=TAR1-A
           PE=4 SV=2
          Length = 109

 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 39/80 (48%), Positives = 44/80 (55%)
 Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGL 71
           F   FSK FSS    TCSLSVS  Y  LDGIYHP R AFPN+ TRR+          TG 
Sbjct: 15  FFTLFSKFFSSFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTRRKHFTNNWDPRHTGF 74

Query: 70  SPSQTPLYRGLGPGPSQRTP 11
           SPS T   +    GP+ + P
Sbjct: 75  SPSMTSCSKEHRQGPATKLP 94


>sp|Q8TGM6|TAR1_YEAST Protein TAR1 OS=Saccharomyces cerevisiae
           GN=TAR1 PE=2 SV=1
          Length = 124

 Score = 69.7 bits (169), Expect = 4e-12
 Identities = 38/80 (47%), Positives = 44/80 (55%)
 Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGL 71
           F   FSK FSS    TCSLSVS  Y  LDGIYHP R AFPN+ T RR   + +    TG 
Sbjct: 30  FFTLFSKFFSSFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTLRRHFTKNRTPRHTGF 89

Query: 70  SPSQTPLYRGLGPGPSQRTP 11
           SPS T   +    G + + P
Sbjct: 90  SPSMTSCSKEHRQGTAPKLP 109


>sp|Q02078|MEF2A_HUMAN Myocyte-specific enhancer factor 2A OS=Homo
           sapiens GN=MEF2A PE=1 SV=1
          Length = 507

 Score = 35.4 bits (80), Expect = 0.089
 Identities = 22/69 (31%), Positives = 36/69 (52%)
 Frame = -2

Query: 217 IPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGLSPSQTPLYRGL 38
           +P    S+SV+ P ++ + + + + G+   SP+          T S+ LSP QT L+R +
Sbjct: 135 LPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLA---ASSTLTDSSMLSPPQTTLHRNV 191

Query: 37  GPGPSQRTP 11
            PG  QR P
Sbjct: 192 SPGAPQRPP 200


>sp|P98203|ARVC_MOUSE Armadillo repeat protein deleted in
           velo-cardio-facial syndrome homolog OS=Mus musculus
           GN=Arvcf PE=1 SV=2
          Length = 962

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -2

Query: 181 PYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGLS--PSQTPLYRGLGPGP 26
           P +TL   YH   G FP+ P  R   +   G+ S GL   P +T L   LGPGP
Sbjct: 176 PAATLSRTYHSSGGGFPDGPESRD--IPSYGSLSRGLGVRPPRTGL---LGPGP 224


>sp|Q0CA78|INO80_ASPTN Putative DNA helicase ino80 OS=Aspergillus
            terreus (strain NIH 2624) GN=ino80 PE=3 SV=1
          Length = 1690

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
 Frame = -2

Query: 172  TLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGLSPSQTPL-----YRGLGPGPSQR 17
            TLD +YH   G F ++  +         T+  G +PS TP+      RG G G S+R
Sbjct: 1614 TLDDMYHEGEGNFDDASAKPSGAATPVSTADVGGTPSSTPVPKRGRGRGTGKGTSKR 1670


>sp|Q5B3C8|NST1_EMENI Stress response protein nst1 OS=Emericella
           nidulans GN=nst1 PE=3 SV=1
          Length = 1125

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 26/65 (40%), Positives = 27/65 (41%)
 Frame = -2

Query: 220 SIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGLSPSQTPLYRG 41
           S P    S S    Y +   I HPH GA P SP  R        T   GLSPS  P   G
Sbjct: 697 SAPLSQSSGSSIPKYGSGHPILHPHPGA-PMSPLGR--------THPPGLSPSNPPGLSG 747

Query: 40  LGPGP 26
           L P P
Sbjct: 748 LVPRP 752


>sp|Q60929|MEF2A_MOUSE Myocyte-specific enhancer factor 2A OS=Mus
           musculus GN=Mef2a PE=1 SV=2
          Length = 498

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 20/76 (26%), Positives = 35/76 (46%)
 Frame = -2

Query: 238 FSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGLSPSQ 59
           F +    +P    S+SV+ P ++ + + + + G+   SP+            S+ LSP  
Sbjct: 126 FKRGPPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLA---ASSTLADSSMLSPPP 182

Query: 58  TPLYRGLGPGPSQRTP 11
             L+R + PG  QR P
Sbjct: 183 ATLHRNVSPGAPQRPP 198


>sp|P15136|E3B14_ADE07 Early E3B 14.9 kDa protein OS=Human
           adenovirus B serotype 7 PE=3 SV=1
          Length = 134

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 200 FAIGLLPVFNLGWNIPPT*GCIPKQPD 120
           F+I + P FN GWN P   G  P++PD
Sbjct: 70  FSITIYPTFNFGWNSPNALG-YPQEPD 95


>sp|P11316|E3B14_ADE03 Early E3B 14.5 kDa protein OS=Human
           adenovirus B serotype 3 PE=3 SV=1
          Length = 134

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 200 FAIGLLPVFNLGWNIPPT*GCIPKQPD 120
           F+I + P FN GWN P   G  P++PD
Sbjct: 70  FSITIYPTFNFGWNSPNALG-YPQEPD 95


>sp|O83940|Y975_TREPA UPF0011 protein TP_0975 OS=Treponema pallidum
           GN=TP_0975 PE=3 SV=1
          Length = 274

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -3

Query: 153 THIGVHSQTARLVDGASWSDRVRARRGSHPLRRPFTGDLGPVRRRGRLS 7
           +H G+H    RLV   + ++   ARR  H L  P +  L P + RGR S
Sbjct: 44  SHFGIHK---RLVSCRAHNEAQAARRLIHFLSTPISAFLSPEKGRGRQS 89
tr_hit_id A5BKB8
Definition tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 80
Score (bit) 114.0
E-value 2.0e-24
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947791|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_A06, 5'
         (341 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis...   114   2e-24
tr|A7TAG1|A7TAG1_NEMVE Predicted protein (Fragment) OS=Nematoste...    84   3e-15
tr|A7T248|A7T248_NEMVE Predicted protein (Fragment) OS=Nematoste...    79   1e-13
tr|A7TCL2|A7TCL2_NEMVE Predicted protein (Fragment) OS=Nematoste...    77   6e-13
tr|A7SWL7|A7SWL7_NEMVE Predicted protein (Fragment) OS=Nematoste...    76   1e-12
tr|A7SUL8|A7SUL8_NEMVE Predicted protein (Fragment) OS=Nematoste...    76   1e-12
tr|A7SPY6|A7SPY6_NEMVE Predicted protein (Fragment) OS=Nematoste...    74   4e-12
tr|A8DVI0|A8DVI0_NEMVE Predicted protein (Fragment) OS=Nematoste...    74   5e-12
tr|A7SQ02|A7SQ02_NEMVE Predicted protein (Fragment) OS=Nematoste...    71   3e-11
tr|A7S3R0|A7S3R0_NEMVE Predicted protein (Fragment) OS=Nematoste...    71   3e-11
tr|A7T1X8|A7T1X8_NEMVE Predicted protein (Fragment) OS=Nematoste...    68   3e-10
tr|A8DWE6|A8DWE6_NEMVE Predicted protein (Fragment) OS=Nematoste...    67   4e-10
tr|A9TBN2|A9TBN2_PHYPA Predicted protein (Fragment) OS=Physcomit...    65   2e-09
tr|Q3KTL6|Q3KTL6_SCHJA SJCHGC01393 protein OS=Schistosoma japoni...    56   1e-06
tr|B1N5S6|B1N5S6_ENTHI Putative uncharacterized protein OS=Entam...    55   2e-06
tr|A8NLF8|A8NLF8_BRUMA Putative uncharacterized protein (Fragmen...    55   2e-06
tr|A5AFX7|A5AFX7_VITVI Putative uncharacterized protein OS=Vitis...    53   9e-06
tr|Q223Q7|Q223Q7_TETTH Putative uncharacterized protein OS=Tetra...    49   1e-04
tr|Q6Z8F0|Q6Z8F0_ORYSJ Putative uncharacterized protein P0459B01...    48   3e-04
tr|A5B938|A5B938_VITVI Putative uncharacterized protein OS=Vitis...    42   0.015
tr|A8PGP3|A8PGP3_BRUMA Putative uncharacterized protein OS=Brugi...    40   0.058
tr|Q9W6U8|Q9W6U8_CHICK MEF2A protein OS=Gallus gallus GN=MEF2A P...    39   0.099
tr|Q57T06|Q57T06_SALCH Putative uncharacterized protein OS=Salmo...    39   0.17 
tr|A4ECR2|A4ECR2_9ACTN Putative uncharacterized protein OS=Colli...    39   0.17 
tr|Q652R5|Q652R5_ORYSJ Putative uncharacterized protein P0603C10...    28   0.59 
tr|Q5REW7|Q5REW7_PONAB Putative uncharacterized protein DKFZp469...    37   0.64 
tr|Q7Z6C9|Q7Z6C9_HUMAN MEF2A protein OS=Homo sapiens GN=MEF2A PE...    37   0.64 
tr|Q59GX4|Q59GX4_HUMAN MADS box transcription enhancer factor 2,...    37   0.64 
tr|B4DFQ7|B4DFQ7_HUMAN cDNA FLJ50129, highly similar to Myocyte-...    37   0.64 
tr|A8K720|A8K720_HUMAN cDNA FLJ75040, highly similar to Homo sap...    37   0.64 

>tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_001840 PE=4 SV=1
          Length = 347

 Score =  114 bits (285), Expect = 2e-24
 Identities = 60/80 (75%), Positives = 62/80 (77%)
 Frame = +1

Query: 4   SG*ASSATDRAQVPCKGASERVRAPSSSYPVAPRGAVDESGCLGMHPYVGGIFHPRLNTG 183
           SG ASSA DRAQVP KGA ERVRAPS   PVAPRGAV ESGC GM    GG F PRLNTG
Sbjct: 264 SGEASSAADRAQVPXKGAPERVRAPSCPDPVAPRGAVGESGCXGMQXQSGGKFRPRLNTG 323

Query: 184 KRPIANKYREG*MKRTLKNK 243
           +RPIANK REG MKRTLK +
Sbjct: 324 ERPIANKCREGKMKRTLKTE 343


>tr|A7TAG1|A7TAG1_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g152336 PE=4 SV=1
          Length = 130

 Score = 84.3 bits (207), Expect = 3e-15
 Identities = 41/72 (56%), Positives = 47/72 (65%)
 Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGL 71
           F   FSK FSS P GTCSLSVSC Y  LDG+YHP   AFPN+PTRR+ +V  +     GL
Sbjct: 25  FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIVNGRDRRRXGL 84

Query: 70  SPSQTPLYRGLG 35
           SPS T   + LG
Sbjct: 85  SPSTTCCSKQLG 96


>tr|A7T248|A7T248_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g76701 PE=4 SV=1
          Length = 70

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 36/62 (58%), Positives = 41/62 (66%)
 Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGL 71
           F   FSK FSS P GTCSLSVSC Y  LDG+YHP   AFPN+PTRR+ +V  +G    G 
Sbjct: 9   FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIVNDRGRRRRGF 68

Query: 70  SP 65
            P
Sbjct: 69  HP 70


>tr|A7TCL2|A7TCL2_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g69522 PE=4 SV=1
          Length = 67

 Score = 76.6 bits (187), Expect = 6e-13
 Identities = 35/59 (59%), Positives = 40/59 (67%)
 Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTG 74
           F   FSK FSS P GTCSLSVSC Y  LDG+YHP   AFPN+PTRR+ +V  +G    G
Sbjct: 9   FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIVNGRGRRRRG 67


>tr|A7SWL7|A7SWL7_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g67728 PE=4 SV=1
          Length = 76

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 35/62 (56%), Positives = 40/62 (64%)
 Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGL 71
           F   FSK FSS P GTCSLSVSC Y  LDG+Y P   AFPN+PTRR+ +V  +G    G 
Sbjct: 15  FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYQPFWAAFPNNPTRRKHIVNGRGRRRRGF 74

Query: 70  SP 65
            P
Sbjct: 75  HP 76


>tr|A7SUL8|A7SUL8_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g76780 PE=4 SV=1
          Length = 70

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 35/62 (56%), Positives = 40/62 (64%)
 Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLVERQGTSSTGL 71
           F   FSK FSS P GTCSLSVSC Y  LDG+YHP   AFPN+PTRR+ +V  +     G 
Sbjct: 9   FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIVNGRDRRRRGC 68

Query: 70  SP 65
            P
Sbjct: 69  HP 70


>tr|A7SPY6|A7SPY6_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g153457 PE=4 SV=1
          Length = 59

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 33/50 (66%), Positives = 37/50 (74%)
 Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRRLV 101
           F   FSK FSS P GTCSLSVSC Y  LDG+YHP   AFPN+PTRR+ +V
Sbjct: 9   FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 58


>tr|A8DVI0|A8DVI0_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g156477 PE=4 SV=1
          Length = 60

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 33/48 (68%), Positives = 36/48 (75%)
 Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRRRR 107
           F   FSK FSS P GTCSLSVSC Y  LDG+YHP   AFPN+PTRR+R
Sbjct: 9   FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKR 56


>tr|A7SQ02|A7SQ02_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g126693 PE=4 SV=1
          Length = 54

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 32/46 (69%), Positives = 34/46 (73%)
 Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRR 113
           F   FSK FSS P GTCSLSVSC Y  LDG+YHP   AFPN+PTRR
Sbjct: 9   FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRR 54


>tr|A7S3R0|A7S3R0_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g103339 PE=4 SV=1
          Length = 61

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 32/46 (69%), Positives = 34/46 (73%)
 Frame = -2

Query: 250 FNLYFSKSFSSIPRGTCSLSVSCPYSTLDGIYHPHRGAFPNSPTRR 113
           F   FSK FSS P GTCSLSVSC Y  LDG+YHP   AFPN+PTRR
Sbjct: 9   FLTLFSKCFSSFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRR 54