DK947810 |
Clone id |
YMU02A01NGRM0001_C05 |
Library |
YMU02 |
Length |
551 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRM0001_C05. 5' end sequence. |
Accession |
DK947810 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL391Contig1 |
Sequence |
GCACGTACTTGATCGAGCAGGGGAAAGCGCAACTCGTGGTTATTGCACATGATGTGGATC CCATTGAGCTGGTTATTTGGCTTCCAGCTCTATGCAGGAAGATGGGTATTCCTTATGCAA TTGTGAAAGGCAAAGCCCGCCTTGGTCAGATTGTCCACTCAAAAACAGCCACAGCTCTAT GTCTCACATCAGTTAAAAACGAGGACAAATTGGAGTTCAGCAAAATTGTAGAAGCTATTA AGGCGAACTTCAATGACCGGTTTGATGACCTTCGAAGGCAATGGGGCGGTGGCATCATGG GGGTCAAGTCACAGGCCAAGACTAAGGCAAAGGAGAAAGTTCTTGCGAAGGAGGCTGCCC AAAGGATGTCCTAAGGGCTGAGCTCGCTGGAGGCGGGACTCGTCGTAGTCTTCAAATTTA GTCTTACTGAATGAGCCCTTTTTTGACAAGAGTTGCAGCATATCTGCTGGCGGAATTTTT GTTTTAAAACCTACAGAATCAATGCTCAACAATTTCTTTCTTTAGAAAAAAAAAAAAAAA AAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P35685 |
Definition |
sp|P35685|RL7A_ORYSJ 60S ribosomal protein L7a OS=Oryza sativa subsp. japonica |
Align length |
123 |
Score (bit) |
184.0 |
E-value |
2.0e-46 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SL50 |
Definition |
tr|A9SL50|A9SL50_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
104 |
Score (bit) |
191.0 |
E-value |
2.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947810|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRM0001_C05, 5' (525 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SL50|A9SL50_PHYPA Predicted protein OS=Physcomitrella paten... 191 2e-47 tr|A9TDW0|A9TDW0_PHYPA Predicted protein (Fragment) OS=Physcomit... 191 2e-47 tr|A9T135|A9T135_PHYPA Predicted protein OS=Physcomitrella paten... 189 6e-47 tr|A7PAF0|A7PAF0_VITVI Chromosome chr14 scaffold_9, whole genome... 189 7e-47 tr|A5BD49|A5BD49_VITVI Putative uncharacterized protein OS=Vitis... 189 7e-47 tr|A9RZJ0|A9RZJ0_PHYPA Predicted protein OS=Physcomitrella paten... 188 1e-46 tr|A9RZI8|A9RZI8_PHYPA Predicted protein OS=Physcomitrella paten... 188 1e-46 tr|A9T138|A9T138_PHYPA Predicted protein OS=Physcomitrella paten... 187 2e-46 tr|B4FPB7|B4FPB7_MAIZE 60S ribosomal protein L7a OS=Zea mays PE=... 185 1e-45 tr|B4F7Y1|B4F7Y1_MAIZE Putative uncharacterized protein OS=Zea m... 185 1e-45 tr|Q0J0I3|Q0J0I3_ORYSJ Os08g0326400 protein OS=Oryza sativa subs... 184 2e-45 tr|B6UE05|B6UE05_MAIZE 60S ribosomal protein L7a OS=Zea mays PE=... 184 2e-45 tr|A6N0C0|A6N0C0_ORYSI 60S ribosomal protein l7a (Fragment) OS=O... 184 2e-45 tr|A2Z2X9|A2Z2X9_ORYSI Putative uncharacterized protein OS=Oryza... 184 2e-45 tr|Q5JJP5|Q5JJP5_ORYSJ Putative 60S ribosomal protein L7A (Putat... 184 2e-45 tr|A2WYJ3|A2WYJ3_ORYSI Putative uncharacterized protein OS=Oryza... 184 2e-45 tr|B6T769|B6T769_MAIZE 60S ribosomal protein L7a OS=Zea mays PE=... 183 5e-45 tr|A9PK85|A9PK85_POPJC Putative uncharacterized protein OS=Popul... 182 9e-45 tr|A9PE97|A9PE97_POPTR Putative uncharacterized protein OS=Popul... 182 9e-45 tr|A9P9M4|A9P9M4_POPTR Putative uncharacterized protein OS=Popul... 182 9e-45 tr|A9P8U0|A9P8U0_POPTR Putative uncharacterized protein OS=Popul... 182 9e-45 tr|A7PHK5|A7PHK5_VITVI Chromosome chr17 scaffold_16, whole genom... 182 1e-44 tr|A7P9Y1|A7P9Y1_VITVI Chromosome chr14 scaffold_9, whole genome... 181 2e-44 tr|Q2XPW4|Q2XPW4_SOLTU 60S ribosomal protein L7A-like protein OS... 180 3e-44 tr|Q2VCI3|Q2VCI3_SOLTU 60S ribosomal protein L7A-like OS=Solanum... 180 4e-44 tr|Q01E81|Q01E81_OSTTA P0703C03.43 gene product (ISS) (Fragment)... 177 3e-43 tr|A4RZE3|A4RZE3_OSTLU Ribosomal protein L7a, component of cytos... 174 2e-42 tr|A7RN14|A7RN14_NEMVE Predicted protein OS=Nematostella vectens... 157 3e-37 tr|Q29J55|Q29J55_DROPS GA17314 OS=Drosophila pseudoobscura pseud... 155 9e-37 tr|B4HBB8|B4HBB8_DROPE GL18200 OS=Drosophila persimilis GN=GL182... 155 1e-36
>tr|A9SL50|A9SL50_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_186119 PE=4 SV=1 Length = 263
Score = 191 bits (485), Expect = 2e-47 Identities = 90/104 (86%), Positives = 100/104 (96%) Frame = +3
Query: 3 TYLIEQGKAQLVVIAHDVDPIELVIWLPALCRKMGIPYAIVKGKARLGQIVHSKTATALC 182 TYLIEQGKAQLVVIAHDVDPIELV+WLPALCRKM +PYAIVKGK+RLGQIVH+KTATALC Sbjct: 141 TYLIEQGKAQLVVIAHDVDPIELVVWLPALCRKMNVPYAIVKGKSRLGQIVHAKTATALC 200
Query: 183 LTSVKNEDKLEFSKIVEAIKANFNDRFDDLRRQWGGGIMGVKSQ 314 LTSVKNEDK EFSKI+EA+KANFN+++D+ RR WGGGIMGVKSQ Sbjct: 201 LTSVKNEDKHEFSKIIEAVKANFNEKYDEHRRHWGGGIMGVKSQ 244
>tr|A9TDW0|A9TDW0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_144102 PE=4 SV=1 Length = 242
Score = 191 bits (484), Expect = 2e-47 Identities = 89/104 (85%), Positives = 100/104 (96%) Frame = +3
Query: 3 TYLIEQGKAQLVVIAHDVDPIELVIWLPALCRKMGIPYAIVKGKARLGQIVHSKTATALC 182 TYLIEQ KAQLVVIAHDVDPIELV+WLPALCRKMG+PYAIVKGK+RLGQIVH+KTATALC Sbjct: 120 TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMGVPYAIVKGKSRLGQIVHAKTATALC 179
Query: 183 LTSVKNEDKLEFSKIVEAIKANFNDRFDDLRRQWGGGIMGVKSQ 314 LTSVKNEDK EFSKI+E++KANFN+++D+ RR WGGGIMGVKSQ Sbjct: 180 LTSVKNEDKHEFSKIIESVKANFNEKYDEYRRHWGGGIMGVKSQ 223
>tr|A9T135|A9T135_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_190565 PE=4 SV=1 Length = 263
Score = 189 bits (481), Expect = 6e-47 Identities = 89/104 (85%), Positives = 99/104 (95%) Frame = +3
Query: 3 TYLIEQGKAQLVVIAHDVDPIELVIWLPALCRKMGIPYAIVKGKARLGQIVHSKTATALC 182 TYLIEQ KAQLVVIAHDVDPIELV+WLPALCRKMG+PY IVKGK+RLGQIVH+KTATALC Sbjct: 141 TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMGVPYCIVKGKSRLGQIVHAKTATALC 200
Query: 183 LTSVKNEDKLEFSKIVEAIKANFNDRFDDLRRQWGGGIMGVKSQ 314 LTSVKNEDK EFSKI+EA+KANFN+++D+ RR WGGGIMGVKSQ Sbjct: 201 LTSVKNEDKHEFSKIIEAVKANFNEKYDEHRRHWGGGIMGVKSQ 244
>tr|A7PAF0|A7PAF0_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038087001 PE=4 SV=1 Length = 276
Score = 189 bits (480), Expect = 7e-47 Identities = 93/123 (75%), Positives = 102/123 (82%) Frame = +3
Query: 3 TYLIEQGKAQLVVIAHDVDPIELVIWLPALCRKMGIPYAIVKGKARLGQIVHSKTATALC 182 TYLIEQ KAQLVVIAHDVDPIELV+WLPALCRKM +PYAIVKGK+RLG IVH KTATALC Sbjct: 154 TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYAIVKGKSRLGAIVHKKTATALC 213
Query: 183 LTSVKNEDKLEFSKIVEAIKANFNDRFDDLRRQWGGGIMGVKSQXXXXXXXXXXXXXXXQ 362 LTSVKNEDKLEFSKIVEA+KANFND++D+ R++WGGGIMG KSQ Q Sbjct: 214 LTSVKNEDKLEFSKIVEAVKANFNDKYDEYRKRWGGGIMGSKSQAKTKAKEKLIAKEAAQ 273
Query: 363 RMS 371 RMS Sbjct: 274 RMS 276
>tr|A5BD49|A5BD49_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030542 PE=4 SV=1 Length = 258
Score = 189 bits (480), Expect = 7e-47 Identities = 93/123 (75%), Positives = 102/123 (82%) Frame = +3
Query: 3 TYLIEQGKAQLVVIAHDVDPIELVIWLPALCRKMGIPYAIVKGKARLGQIVHSKTATALC 182 TYLIEQ KAQLVVIAHDVDPIELV+WLPALCRKM +PYAIVKGK+RLG IVH KTATALC Sbjct: 136 TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYAIVKGKSRLGAIVHKKTATALC 195
Query: 183 LTSVKNEDKLEFSKIVEAIKANFNDRFDDLRRQWGGGIMGVKSQXXXXXXXXXXXXXXXQ 362 LTSVKNEDKLEFSKIVEA+KANFND++D+ R++WGGGIMG KSQ Q Sbjct: 196 LTSVKNEDKLEFSKIVEAVKANFNDKYDEYRKRWGGGIMGSKSQAKTKAKEKLIAKEAAQ 255
Query: 363 RMS 371 RMS Sbjct: 256 RMS 258
>tr|A9RZJ0|A9RZJ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_105479 PE=4 SV=1 Length = 263
Score = 188 bits (478), Expect = 1e-46 Identities = 88/104 (84%), Positives = 99/104 (95%) Frame = +3
Query: 3 TYLIEQGKAQLVVIAHDVDPIELVIWLPALCRKMGIPYAIVKGKARLGQIVHSKTATALC 182 TYLIEQ KAQLVVIAHDVDPIELV+WLPALCRKMG+PY IVKGK+RLGQIVH+KTATALC Sbjct: 141 TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMGVPYCIVKGKSRLGQIVHAKTATALC 200
Query: 183 LTSVKNEDKLEFSKIVEAIKANFNDRFDDLRRQWGGGIMGVKSQ 314 LT+VKNEDK EFSKI+EA+KANFN+++D+ RR WGGGIMGVKSQ Sbjct: 201 LTAVKNEDKHEFSKIIEAVKANFNEKYDEHRRHWGGGIMGVKSQ 244
>tr|A9RZI8|A9RZI8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_179771 PE=4 SV=1 Length = 263
Score = 188 bits (478), Expect = 1e-46 Identities = 88/104 (84%), Positives = 99/104 (95%) Frame = +3
Query: 3 TYLIEQGKAQLVVIAHDVDPIELVIWLPALCRKMGIPYAIVKGKARLGQIVHSKTATALC 182 TYLIEQ KAQLVVIAHDVDPIELV+WLPALCRKMG+PY IVKGK+RLGQIVH+KTATALC Sbjct: 141 TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMGVPYCIVKGKSRLGQIVHAKTATALC 200
Query: 183 LTSVKNEDKLEFSKIVEAIKANFNDRFDDLRRQWGGGIMGVKSQ 314 LT+VKNEDK EFSKI+EA+KANFN+++D+ RR WGGGIMGVKSQ Sbjct: 201 LTAVKNEDKHEFSKIIEAVKANFNEKYDEHRRHWGGGIMGVKSQ 244
>tr|A9T138|A9T138_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_190571 PE=4 SV=1 Length = 263
Score = 187 bits (476), Expect = 2e-46 Identities = 89/104 (85%), Positives = 99/104 (95%) Frame = +3
Query: 3 TYLIEQGKAQLVVIAHDVDPIELVIWLPALCRKMGIPYAIVKGKARLGQIVHSKTATALC 182 TYLIEQ KAQLVVIAHDVDPIELV+WLPALCRKMG+PY IVKGK+RLGQIVH+KTATALC Sbjct: 141 TYLIEQVKAQLVVIAHDVDPIELVVWLPALCRKMGVPYCIVKGKSRLGQIVHAKTATALC 200
Query: 183 LTSVKNEDKLEFSKIVEAIKANFNDRFDDLRRQWGGGIMGVKSQ 314 LTSVKNEDK EF+KIVEA+KANFN+++D+ RR WGGGIMGVKSQ Sbjct: 201 LTSVKNEDKHEFAKIVEAVKANFNEKYDEHRRHWGGGIMGVKSQ 244
>tr|B4FPB7|B4FPB7_MAIZE 60S ribosomal protein L7a OS=Zea mays PE=2 SV=1 Length = 258
Score = 185 bits (469), Expect = 1e-45 Identities = 90/123 (73%), Positives = 101/123 (82%) Frame = +3
Query: 3 TYLIEQGKAQLVVIAHDVDPIELVIWLPALCRKMGIPYAIVKGKARLGQIVHSKTATALC 182 TYLIEQ KAQLVVIAHDVDPIELV+WLPALCRKM +PY IVKGKARLG IVH KTA+ LC Sbjct: 136 TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLC 195
Query: 183 LTSVKNEDKLEFSKIVEAIKANFNDRFDDLRRQWGGGIMGVKSQXXXXXXXXXXXXXXXQ 362 LT+VKNEDKLEFSKI+EAIKANFND+FD++R++WGGGIMG KSQ Q Sbjct: 196 LTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGIMGSKSQAKTKAREKLLAKEAAQ 255
Query: 363 RMS 371 RM+ Sbjct: 256 RMT 258
>tr|B4F7Y1|B4F7Y1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 257
Score = 185 bits (469), Expect = 1e-45 Identities = 90/123 (73%), Positives = 101/123 (82%) Frame = +3
Query: 3 TYLIEQGKAQLVVIAHDVDPIELVIWLPALCRKMGIPYAIVKGKARLGQIVHSKTATALC 182 TYLIEQ KAQLVVIAHDVDPIELV+WLPALCRKM +PY IVKGKARLG IVH KTA+ LC Sbjct: 135 TYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLC 194
Query: 183 LTSVKNEDKLEFSKIVEAIKANFNDRFDDLRRQWGGGIMGVKSQXXXXXXXXXXXXXXXQ 362 LT+VKNEDKLEFSKI+EAIKANFND+FD++R++WGGGIMG KSQ Q Sbjct: 195 LTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGIMGSKSQAKTKAREKLLAKEAAQ 254
Query: 363 RMS 371 RM+ Sbjct: 255 RMT 257
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