DK947816
Clone id YMU02A01NGRM0001_C11
Library
Length 277
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRM0001_C11. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCAGGTGGCCAGATTACGTGGCATTATGCCCCTCCTCGGTGGTTTCTCCTCCACTCATCA
CACCGACCACCATGAGATTGTTCTAGTCGAGTTGTCACTATAGTGGCTCTCCTCCTTACA
TTCAGCTTGTACACCCCACGTGATAGGCTATTTTGGCATCCGCTGGGGATTATATTGTAC
TCAGTAATATACAGCCCTGACTTTTTCCAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947816|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_C11, 5'
(247 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B8R1V6
Definition tr|B8R1V6|B8R1V6_9ACTO Trehalose hydrolase OS=Streptomyces verticillus
Align length 61
Score (bit) 33.5
E-value 5.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947816|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_C11, 5'
(247 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8R1V6|B8R1V6_9ACTO Trehalose hydrolase OS=Streptomyces verti... 33 5.5

>tr|B8R1V6|B8R1V6_9ACTO Trehalose hydrolase OS=Streptomyces
verticillus PE=4 SV=1
Length = 801

Score = 33.5 bits (75), Expect = 5.5
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = +1

Query: 22 HYAPPRWFLLHSSHRPP*DCSSRVVTIVALLLTFSLYTPRDRLFWHPLGIILYSVIYSPD 201
HYA R+ LL + P VAL T +L+T RDR PLG + V +PD
Sbjct: 237 HYAGHRFVLLLPADVP-----------VALTKTVALHTSRDRAIADPLGAAVERVAAAPD 285

Query: 202 F 204
F
Sbjct: 286 F 286