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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947817
Clone id YMU02A01NGRM0001_C12
Library
Length 260
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRM0001_C12. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGCGGGCCCAAGTCCCCTGGAA
AGGGGCGTCAGAGAGGGTGAGAGCCCCGTCGAGCTCGGACCCTGTCGCTCCACGAGGCGC
CGTCGACGAGTCGGGCTGTTTGGGAATGCAGCCCTAAGTGGGTGGTAGATTCCATCCAAG
GCTAAATACGGGCAAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAAAAA
AAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6CQE5
Definition sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis
Align length 37
Score (bit) 60.5
E-value 3.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947817|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_C12, 5'
         (192 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis GN=TAR...    60   3e-09
sp|Q8TGM6|TAR1_YEAST Protein TAR1 OS=Saccharomyces cerevisiae GN...    60   4e-09
sp|Q8BII1|PROX2_MOUSE Prospero homeobox protein 2 OS=Mus musculu...    31   2.2  
sp|A6P320|MARHB_RAT E3 ubiquitin-protein ligase MARCH11 OS=Rattu...    30   3.8  
sp|Q8CBH7|MARHB_MOUSE E3 ubiquitin-protein ligase MARCH11 OS=Mus...    30   3.8  

>sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis GN=TAR1-A
           PE=4 SV=2
          Length = 109

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = -3

Query: 190 SFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRR 80
           SF   TCSLSVS  YLALDGIYHPLRAAFPN+ TRR+
Sbjct: 25  SFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTRRK 61


>sp|Q8TGM6|TAR1_YEAST Protein TAR1 OS=Saccharomyces cerevisiae
           GN=TAR1 PE=2 SV=1
          Length = 124

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 29/43 (67%), Positives = 32/43 (74%)
 Frame = -3

Query: 190 SFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLVERQ 62
           SF   TCSLSVS  YLALDGIYHPLRAAFPN+ T RR   + +
Sbjct: 40  SFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTLRRHFTKNR 82


>sp|Q8BII1|PROX2_MOUSE Prospero homeobox protein 2 OS=Mus musculus
           GN=Prox2 PE=2 SV=1
          Length = 593

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 8   KSPGKGRQRG*EPRRARTLSLHEAPSTSRAVWECSPK 118
           + P KGR+R    +R ++L +H+ P  S   WE  PK
Sbjct: 93  RCPEKGRER----KRKQSLPMHQGPLKSSPAWERGPK 125


>sp|A6P320|MARHB_RAT E3 ubiquitin-protein ligase MARCH11 OS=Rattus
           norvegicus GN=March11 PE=1 SV=1
          Length = 398

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = +3

Query: 6   PSPLERGVREGESPVELGPCR 68
           P+PLER V  GE PVEL P R
Sbjct: 47  PAPLERIVGSGEPPVELAPRR 67


>sp|Q8CBH7|MARHB_MOUSE E3 ubiquitin-protein ligase MARCH11 OS=Mus
           musculus GN=March11 PE=2 SV=2
          Length = 400

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = +3

Query: 6   PSPLERGVREGESPVELGPCR 68
           P+PLER V  GE PVEL P R
Sbjct: 47  PAPLERIVGSGEPPVELAPRR 67
tr_hit_id A5BKB8
Definition tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 64
Score (bit) 103.0
E-value 4.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947817|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_C12, 5'
         (192 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis...   103   4e-21
tr|A7T248|A7T248_NEMVE Predicted protein (Fragment) OS=Nematoste...    72   7e-12
tr|A7TCL2|A7TCL2_NEMVE Predicted protein (Fragment) OS=Nematoste...    72   1e-11
tr|A7TAG1|A7TAG1_NEMVE Predicted protein (Fragment) OS=Nematoste...    72   1e-11
tr|A7SUL8|A7SUL8_NEMVE Predicted protein (Fragment) OS=Nematoste...    72   1e-11
tr|A7SPY6|A7SPY6_NEMVE Predicted protein (Fragment) OS=Nematoste...    72   1e-11
tr|A8DVI0|A8DVI0_NEMVE Predicted protein (Fragment) OS=Nematoste...    72   1e-11
tr|A7SWL7|A7SWL7_NEMVE Predicted protein (Fragment) OS=Nematoste...    69   9e-11
tr|A7SQ02|A7SQ02_NEMVE Predicted protein (Fragment) OS=Nematoste...    69   9e-11
tr|A7S3R0|A7S3R0_NEMVE Predicted protein (Fragment) OS=Nematoste...    69   9e-11
tr|A7T1X8|A7T1X8_NEMVE Predicted protein (Fragment) OS=Nematoste...    66   8e-10
tr|A8DWE6|A8DWE6_NEMVE Predicted protein (Fragment) OS=Nematoste...    65   1e-09
tr|A9TBN2|A9TBN2_PHYPA Predicted protein (Fragment) OS=Physcomit...    61   3e-08
tr|Q3KTL6|Q3KTL6_SCHJA SJCHGC01393 protein OS=Schistosoma japoni...    59   1e-07
tr|B1N5S6|B1N5S6_ENTHI Putative uncharacterized protein OS=Entam...    59   1e-07
tr|A8NLF8|A8NLF8_BRUMA Putative uncharacterized protein (Fragmen...    54   5e-06
tr|A5AFX7|A5AFX7_VITVI Putative uncharacterized protein OS=Vitis...    50   6e-05
tr|Q223Q7|Q223Q7_TETTH Putative uncharacterized protein OS=Tetra...    49   1e-04
tr|A8PGP3|A8PGP3_BRUMA Putative uncharacterized protein OS=Brugi...    37   0.64 
tr|A5B938|A5B938_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|Q652R5|Q652R5_ORYSJ Putative uncharacterized protein P0603C10...    35   1.4  
tr|Q57T06|Q57T06_SALCH Putative uncharacterized protein OS=Salmo...    34   4.2  
tr|Q57J74|Q57J74_SALCH Putative uncharacterized protein OS=Salmo...    34   4.2  
tr|Q1I375|Q1I375_PSEE4 Putative uncharacterized protein OS=Pseud...    33   5.5  
tr|Q6Z8F0|Q6Z8F0_ORYSJ Putative uncharacterized protein P0459B01...    33   5.5  

>tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_001840 PE=4 SV=1
          Length = 347

 Score =  103 bits (257), Expect = 4e-21
 Identities = 51/64 (79%), Positives = 53/64 (82%)
 Frame = +1

Query: 1   RAQVPWKGASERVRAPSSSDPVAPRGAVDESGCLGMQP*VGGRFHPRLNTGKRPIANKYR 180
           RAQVP KGA ERVRAPS  DPVAPRGAV ESGC GMQ   GG+F PRLNTG+RPIANK R
Sbjct: 273 RAQVPXKGAPERVRAPSCPDPVAPRGAVGESGCXGMQXQSGGKFRPRLNTGERPIANKCR 332

Query: 181 EGKM 192
           EGKM
Sbjct: 333 EGKM 336


>tr|A7T248|A7T248_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g76701 PE=4 SV=1
          Length = 70

 Score = 72.4 bits (176), Expect(2) = 7e-12
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = -3

Query: 190 SFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 71
           SFP GTCSLSVSC YLALDG+YHP  AAFPN+PTRR+ +V
Sbjct: 19  SFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 58



 Score = 20.8 bits (42), Expect(2) = 7e-12
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 69 SDRVRARRGSHP 34
          +DR R RRG HP
Sbjct: 59 NDRGRRRRGFHP 70


>tr|A7TCL2|A7TCL2_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g69522 PE=4 SV=1
          Length = 67

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = -3

Query: 190 SFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 71
           SFP GTCSLSVSC YLALDG+YHP  AAFPN+PTRR+ +V
Sbjct: 19  SFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 58


>tr|A7TAG1|A7TAG1_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g152336 PE=4 SV=1
          Length = 130

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = -3

Query: 190 SFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 71
           SFP GTCSLSVSC YLALDG+YHP  AAFPN+PTRR+ +V
Sbjct: 35  SFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 74


>tr|A7SUL8|A7SUL8_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g76780 PE=4 SV=1
          Length = 70

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = -3

Query: 190 SFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 71
           SFP GTCSLSVSC YLALDG+YHP  AAFPN+PTRR+ +V
Sbjct: 19  SFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 58


>tr|A7SPY6|A7SPY6_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g153457 PE=4 SV=1
          Length = 59

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = -3

Query: 190 SFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 71
           SFP GTCSLSVSC YLALDG+YHP  AAFPN+PTRR+ +V
Sbjct: 19  SFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKHIV 58


>tr|A8DVI0|A8DVI0_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g156477 PE=4 SV=1
          Length = 60

 Score = 72.0 bits (175), Expect = 1e-11
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = -3

Query: 190 SFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRR 77
           SFP GTCSLSVSC YLALDG+YHP  AAFPN+PTRR+R
Sbjct: 19  SFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRRKR 56


>tr|A7SWL7|A7SWL7_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g67728 PE=4 SV=1
          Length = 76

 Score = 69.3 bits (168), Expect = 9e-11
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -3

Query: 190 SFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLV 71
           SFP GTCSLSVSC YLALDG+Y P  AAFPN+PTRR+ +V
Sbjct: 25  SFPHGTCSLSVSCQYLALDGVYQPFWAAFPNNPTRRKHIV 64


>tr|A7SQ02|A7SQ02_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g126693 PE=4 SV=1
          Length = 54

 Score = 69.3 bits (168), Expect = 9e-11
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = -3

Query: 190 SFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRR 83
           SFP GTCSLSVSC YLALDG+YHP  AAFPN+PTRR
Sbjct: 19  SFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRR 54


>tr|A7S3R0|A7S3R0_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g103339 PE=4 SV=1
          Length = 61

 Score = 69.3 bits (168), Expect = 9e-11
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = -3

Query: 190 SFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRR 83
           SFP GTCSLSVSC YLALDG+YHP  AAFPN+PTRR
Sbjct: 19  SFPHGTCSLSVSCQYLALDGVYHPFWAAFPNNPTRR 54