DK947834
Clone id YMU02A01NGRM0001_E09
Library
Length 194
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRM0001_E09. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCATTAGCTTCTGAAACTGTACTGTGCAATATAGGAATCTTACACTTGAATGCGTTCTGC
ATTCAAAAGGAATTGGCATTAGCTTCTGAAACTGTACCGTGCAATTTAGGAATCTTACAC
TCGAATGTGTTGTGCATTCAAATTGAATGGGGATTGTCAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q4ULD7
Definition sp|Q4ULD7|IDI2_RICFE Isopentenyl-diphosphate delta-isomerase OS=Rickettsia felis
Align length 38
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947834|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_E09, 5'
(158 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q4ULD7|IDI2_RICFE Isopentenyl-diphosphate delta-isomerase OS=... 30 4.9

>sp|Q4ULD7|IDI2_RICFE Isopentenyl-diphosphate delta-isomerase
OS=Rickettsia felis GN=fni PE=3 SV=1
Length = 345

Score = 29.6 bits (65), Expect = 4.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1

Query: 19 VLCNIGILHLNAFCIQKELALASETVPCNLGILHSNVL 132
+L NIG + LN F KE + V + ILH NVL
Sbjct: 127 LLANIGAVQLNYFVTPKECQYLVDVVKADALILHLNVL 164


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947834|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_E09, 5'
(158 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******