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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947836
Clone id YMU02A01NGRM0001_E11
Library
Length 621
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRM0001_E11. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
ACTACTCAGCAATCGAAGAGCACGCACTGTGAGATCTCGCTTTCTAGCGGAGTTCGTCGT
CCTGCGACATGGCTGCCCTCGCTGCCGCGTCCGTCTCCAACGCTGCTGCTCTGGGCAACA
GCCTTGCCACCAAGAATGCTCTTCGCGAGAAGGTCCCTGTGGTGCAGGCCAGAGTCAGCA
TGAATTCTGAGTACTGGTATGGGCCCGATCGCCCCAAATACCTTGGCCCCTTCTCTGCCC
AGACCCCTTCCTACCTCAAGGGCGTGTTCCCTGGCGATTACGGCTGGGACACCGCTGGCC
TATCTGCAGACCCTGAGGCATTTGCTAAGAACAGGGCCTTGGAGGTTATTCACAGCCGAT
GGGCCATGCTTGGAGCTTTGGGATGCATCTTCCCAGAGGTTGCACAGAAGTATCTGAATG
TGTCCTTCAAGGAGGCAGTCTGGTTCAAGGCTGGAGCACAGATTTTCTCAGAGGGTGGGT
TGGACAACCTCGGCAACCCCAACCTTGTTCATGCACAGAGCATTCTCGCCATTTGGGCAT
GCCAGGTGGTGTTGATGGGAGCTGCAGAGGGCTACCGCATCAATGGTTTATCAGGAGTTG
GTGAGGGTGGTGACTTGTATC
■■Homology search results ■■ -
sp_hit_id P27489
Definition sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum
Align length 166
Score (bit) 266.0
E-value 6.0e-71
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947836|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_E11, 5'
         (621 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop...   266   6e-71
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...   262   1e-69
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   238   2e-62
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   234   2e-61
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   234   2e-61
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   234   3e-61
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   234   4e-61
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   233   6e-61
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   232   1e-60
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   229   9e-60
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   229   1e-59
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   228   1e-59
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   228   1e-59
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   228   2e-59
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   228   3e-59
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   228   3e-59
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   228   3e-59
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   227   3e-59
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   227   3e-59
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   226   6e-59
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   226   6e-59
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   226   6e-59
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   226   6e-59
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   226   6e-59
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   226   1e-58
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   226   1e-58
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   226   1e-58
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   224   2e-58
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   224   2e-58
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   224   4e-58

>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13,
           chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1
          Length = 265

 Score =  266 bits (680), Expect = 6e-71
 Identities = 129/166 (77%), Positives = 142/166 (85%), Gaps = 2/166 (1%)
 Frame = +3

Query: 129 TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGL 302
           TKNA  LR+ V +  AR +M+++ WYGPDR KYLGPFSAQTPSYL G FPGDYGWDTAGL
Sbjct: 23  TKNANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGL 82

Query: 303 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 482
           SADPEAFAKNRALEVIH RWAMLGALGCIFPEV +K++ V FKE VWFKAG+QIFS+GGL
Sbjct: 83  SADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGL 142

Query: 483 DNLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLY 620
           D LGNPNLVHAQSILA+   QVVLMG  EG+RINGL GVGEG DLY
Sbjct: 143 DYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLY 188



 Score = 31.2 bits (69), Expect = 4.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 264 VFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 383
           ++PG   +D  GL+ DP  FA+ +  E+ + R AM    G
Sbjct: 187 LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226


>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type
           III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1
          Length = 268

 Score =  262 bits (669), Expect = 1e-69
 Identities = 122/160 (76%), Positives = 135/160 (84%)
 Frame = +3

Query: 141 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGLSADPEA 320
           LR+       R++M ++ WYGPDR KYLGPFSAQTPSYL G FPGDYGWDTAGLSADPEA
Sbjct: 32  LRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA 91

Query: 321 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDNLGNP 500
           FA+NRALEVIH RWAMLGALGC+FPEV QK++ V FKE VWFKAG+QIFSEGGLD LGNP
Sbjct: 92  FARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP 151

Query: 501 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLY 620
           NLVHAQSILA+   QV+LMG  EG+RINGL GVGEG DLY
Sbjct: 152 NLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLY 191


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  238 bits (607), Expect = 2e-62
 Identities = 122/168 (72%), Positives = 128/168 (76%), Gaps = 7/168 (4%)
 Frame = +3

Query: 132 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWD 290
           +N L  KV     RVSM           WYGPDRPKYLGPFS QTPSYL G FPGDYGWD
Sbjct: 20  QNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 291 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 470
           TAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+  K   V F EAVWFKAG+QIF 
Sbjct: 80  TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKN-GVKFGEAVWFKAGSQIFQ 138

Query: 471 EGGLDNLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD 614
           EGGLD LGNPNLVHAQSILAIWACQVVLMGA EGYR+ G   +GEG D
Sbjct: 139 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGG-GPLGEGLD 185


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  234 bits (598), Expect = 2e-61
 Identities = 114/140 (81%), Positives = 119/140 (85%)
 Frame = +3

Query: 195 WYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 374
           WYGPDRPKYLGPFS QTPSYL G FPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47  WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 375 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDNLGNPNLVHAQSILAIWACQVVL 554
           ALGC+FPE+  K   V F EAVWFKAGAQIFSEGGLD LGNPNLVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 555 MGAAEGYRINGLSGVGEGGD 614
           MG  EGYR+ G   +GEG D
Sbjct: 166 MGFVEGYRVGG-GPLGEGLD 184


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  234 bits (598), Expect = 2e-61
 Identities = 114/140 (81%), Positives = 119/140 (85%)
 Frame = +3

Query: 195 WYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 374
           WYGPDRPKYLGPFS QTPSYL G FPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47  WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 375 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDNLGNPNLVHAQSILAIWACQVVL 554
           ALGC+FPE+  K   V F EAVWFKAGAQIFSEGGLD LGNPNLVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 555 MGAAEGYRINGLSGVGEGGD 614
           MG  EGYR+ G   +GEG D
Sbjct: 166 MGFVEGYRVGG-GPLGEGLD 184


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  234 bits (597), Expect = 3e-61
 Identities = 117/168 (69%), Positives = 128/168 (76%), Gaps = 7/168 (4%)
 Frame = +3

Query: 132 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWD 290
           +N L +KV   QAR++M           WYGPDRPKYLGPFS  TPSYL G FPGDYGWD
Sbjct: 22  QNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWD 81

Query: 291 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 470
           TA +SADPE FAKNR LEVIH RWAMLGALGC+FPE+  K   + F EAVWFKAGAQIFS
Sbjct: 82  TAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKN-GLKFGEAVWFKAGAQIFS 140

Query: 471 EGGLDNLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD 614
           EGGLD  GNPNL+HAQSILAIWACQVVLMG  EGYR+ G   +GEG D
Sbjct: 141 EGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGG-GTLGEGLD 187


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  234 bits (596), Expect = 4e-61
 Identities = 113/146 (77%), Positives = 120/146 (82%)
 Frame = +3

Query: 177 SMNSEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGLSADPEAFAKNRALEVIHS 356
           S  +  WYGPDRPKYLGPFS Q PSYL G FPGDYGWDTAGLSADPE FAKNR LEVIH 
Sbjct: 43  SAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 102

Query: 357 RWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDNLGNPNLVHAQSILAIW 536
           RWAMLGALGC+FPE+  K   V F EAVWFKAG+QIFSEGGLD LGNPNL+HAQSILAIW
Sbjct: 103 RWAMLGALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIW 161

Query: 537 ACQVVLMGAAEGYRINGLSGVGEGGD 614
           ACQVVLMG  EGYR+ G   +GEG D
Sbjct: 162 ACQVVLMGFVEGYRVGG-GPLGEGLD 186



 Score = 32.0 bits (71), Expect = 2.6
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 255 LKGVFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 383
           L  ++PG   +D  GL+ DP+AFA+ +  E+ + R AM    G
Sbjct: 185 LDPIYPGG-AFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFG 226


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  233 bits (594), Expect = 6e-61
 Identities = 121/168 (72%), Positives = 127/168 (75%), Gaps = 7/168 (4%)
 Frame = +3

Query: 132 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWD 290
           ++ L  KV V   R SM           WYG DRPK+LGPFS QTPSYL G FPGDYGWD
Sbjct: 20  RDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 291 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 470
           TAGLSADPE FAKNR LEVIHSRWAMLGALGCIFPE+  K   V F EAVWFKAGAQIFS
Sbjct: 80  TAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKN-GVQFGEAVWFKAGAQIFS 138

Query: 471 EGGLDNLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD 614
           EGGLD LGNPNLVHAQSILAIWA QVVLMG  EGYR+ G   +GEG D
Sbjct: 139 EGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGG-GPLGEGLD 185



 Score = 32.3 bits (72), Expect = 2.0
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = +3

Query: 255 LKGVFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 383
           L  ++PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 184 LDPLYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  232 bits (592), Expect = 1e-60
 Identities = 112/140 (80%), Positives = 118/140 (84%)
 Frame = +3

Query: 195 WYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 374
           WYG DRPKYLGPFS QTPSYL G FPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 49  WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLG 108

Query: 375 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDNLGNPNLVHAQSILAIWACQVVL 554
           ALGC+FPE+  K   V F EAVWFKAG+QIFSEGGLD LGNPNLVHAQSILAIWACQVVL
Sbjct: 109 ALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 167

Query: 555 MGAAEGYRINGLSGVGEGGD 614
           MG  EGYR+ G   +GEG D
Sbjct: 168 MGFVEGYRVGG-GPLGEGLD 186



 Score = 33.1 bits (74), Expect = 1.2
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = +3

Query: 255 LKGVFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 383
           L  ++PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 185 LDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  229 bits (584), Expect = 9e-60
 Identities = 109/143 (76%), Positives = 120/143 (83%)
 Frame = +3

Query: 159 VVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGLSADPEAFAKNRA 338
           V + +V+ +   WYGPDR KYLGPFS + PSYL G FPGDYGWDTAGLSADPE FAKNR 
Sbjct: 34  VGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 93

Query: 339 LEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDNLGNPNLVHAQ 518
           LEVIHSRWAMLGALGC+FPE+  +   V F EAVWFKAG+QIFSEGGLD LGNP+L+HAQ
Sbjct: 94  LEVIHSRWAMLGALGCVFPELLSRN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQ 152

Query: 519 SILAIWACQVVLMGAAEGYRING 587
           SILAIWACQVVLMGA EGYRI G
Sbjct: 153 SILAIWACQVVLMGAVEGYRIAG 175



 Score = 31.2 bits (69), Expect = 4.5
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 264 VFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 383
           ++PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 185 LYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 223
tr_hit_id Q9XQB1
Definition tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding protein OS=Phaseolus aureus
Align length 162
Score (bit) 266.0
E-value 1.0e-69
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947836|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_E11, 5'
         (621 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding pr...   266   1e-69
tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, who...   265   2e-69
tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis...   265   2e-69
tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding prote...   264   3e-69
tr|A6H5B7|A6H5B7_VIGUN Putative LHCII type III chlorophyll a/b b...   262   1e-68
tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome...   261   2e-68
tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza...   261   3e-68
tr|Q39339|Q39339_BRANA LHC II Type III chlorophyll a /b binding ...   260   4e-68
tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding prote...   260   4e-68
tr|Q6ZF30|Q6ZF30_ORYSJ Os07g0562700 protein OS=Oryza sativa subs...   259   7e-68
tr|B7SAW4|B7SAW4_BAMOL Chloroplast chlorophyll a/b binding prote...   259   1e-67
tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella paten...   258   2e-67
tr|Q04918|Q04918_PEA Chlorophyll a/b-binding protein (Chloroplas...   258   2e-67
tr|Q9S7M0|Q9S7M0_ARATH Type III chlorophyll a/b binding protein ...   258   3e-67
tr|Q5I8X1|Q5I8X1_PEA Light-harvesting chlorophyll-a/b binding pr...   257   3e-67
tr|Q9SDT2|Q9SDT2_DAUCA Chlorophyll a/b-binding protein OS=Daucus...   256   1e-66
tr|A9PJV4|A9PJV4_POPJC Putative uncharacterized protein OS=Popul...   256   1e-66
tr|B6SUM9|B6SUM9_MAIZE Chlorophyll a-b binding protein of LHCII ...   255   2e-66
tr|Q39341|Q39341_BRANA LHCII Type III chlorophyll a/b binding pr...   246   8e-64
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   244   2e-63
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   243   9e-63
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   241   3e-62
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   241   3e-62
tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   240   4e-62
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   240   4e-62
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   239   1e-61
tr|B6T1H1|B6T1H1_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   239   1e-61
tr|B6SZT9|B6SZT9_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   239   1e-61
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   239   1e-61
tr|Q39340|Q39340_BRANA LHC II Type III chlorophyll a/b binding p...   238   2e-61

>tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding
           protein OS=Phaseolus aureus GN=CipLhcb3 PE=2 SV=1
          Length = 269

 Score =  266 bits (679), Expect = 1e-69
 Identities = 128/162 (79%), Positives = 138/162 (85%)
 Frame = +3

Query: 135 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGLSADP 314
           N LR+ V +   + SM++E WYGPDR KYLGPFSAQTPSYLKG FPGDYGWDTAGLSADP
Sbjct: 31  NPLRDVVSMGSGKYSMSNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 90

Query: 315 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDNLG 494
           EAFAKNRALEVIH RWAMLGALGCI PEV +K+L V FKE VWFKAGAQIFSEGGLD LG
Sbjct: 91  EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 495 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLY 620
           NPNLVHAQSILA+   QVVLMG  EG+RINGL GVGEG +LY
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLY 192


>tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00009737001 PE=4 SV=1
          Length = 264

 Score =  265 bits (677), Expect = 2e-69
 Identities = 127/162 (78%), Positives = 136/162 (83%)
 Frame = +3

Query: 135 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGLSADP 314
           N LRE VP+   + +M +E WYGPDR KYLGPFSAQTPSYL G FPGDYGWDTAGLSADP
Sbjct: 26  NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 315 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDNLG 494
           EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLD LG
Sbjct: 86  EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 145

Query: 495 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLY 620
           NPNLVHAQSILA+   QVVLMG  EGYRINGL GVGEG DLY
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLY 187


>tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_001096 PE=4 SV=1
          Length = 269

 Score =  265 bits (677), Expect = 2e-69
 Identities = 127/162 (78%), Positives = 136/162 (83%)
 Frame = +3

Query: 135 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGLSADP 314
           N LRE VP+   + +M +E WYGPDR KYLGPFSAQTPSYL G FPGDYGWDTAGLSADP
Sbjct: 31  NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 90

Query: 315 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDNLG 494
           EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLD LG
Sbjct: 91  EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 495 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLY 620
           NPNLVHAQSILA+   QVVLMG  EGYRINGL GVGEG DLY
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLY 192


>tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding protein
           cab-BO3 OS=Bambusa oldhamii PE=2 SV=1
          Length = 267

 Score =  264 bits (675), Expect = 3e-69
 Identities = 128/166 (77%), Positives = 138/166 (83%), Gaps = 2/166 (1%)
 Frame = +3

Query: 129 TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGL 302
           T NA  LR+       R++M+++ WYGPDR KYLGPFSAQTPSYL G FPGDYGWDTAGL
Sbjct: 25  TANASPLRDVAAAANGRITMSNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGL 84

Query: 303 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 482
           SADPEAFA+NRALEVIH RWAMLGALGCI PEV QK+L V FKE VWFKAGAQIFSEGGL
Sbjct: 85  SADPEAFARNRALEVIHGRWAMLGALGCITPEVLQKWLRVDFKEPVWFKAGAQIFSEGGL 144

Query: 483 DNLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLY 620
           D LGNPNLVHAQSILA+   QV+LMG  EGYRINGL GVGEG DLY
Sbjct: 145 DYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGLPGVGEGNDLY 190


>tr|A6H5B7|A6H5B7_VIGUN Putative LHCII type III chlorophyll a/b
           binding protein (Fragment) OS=Vigna unguiculata
           GN=CipLhcb3 PE=2 SV=1
          Length = 211

 Score =  262 bits (670), Expect = 1e-68
 Identities = 126/162 (77%), Positives = 138/162 (85%)
 Frame = +3

Query: 135 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGLSADP 314
           N LR+ V +   + +M+++ WYGPDR KYLGPFSAQTPSYLKG FPGDYGWDTAGLSADP
Sbjct: 31  NPLRDAVSMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 90

Query: 315 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDNLG 494
           EAFAKNRALEVIH RWA+LGALGCI PEV  K+L V FKE VWFKAGAQIFSEGGLD LG
Sbjct: 91  EAFAKNRALEVIHGRWALLGALGCITPEVLGKWLRVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 495 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLY 620
           NPNLVHAQSILA+   QVVLMG AEG+RINGL GVGEG +LY
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLAEGFRINGLDGVGEGNNLY 192


>tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027591001
           PE=4 SV=1
          Length = 264

 Score =  261 bits (668), Expect = 2e-68
 Identities = 124/162 (76%), Positives = 137/162 (84%)
 Frame = +3

Query: 135 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGLSADP 314
           N LR+ VP+   + +M +E WYGPDR KYLGPFSAQTPSYL G FPGDYGWDTAGLSADP
Sbjct: 26  NPLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 315 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDNLG 494
           EAFA+NRALEVIH RWAMLGALGCI PEV +K+L V FKE +WFKAGAQIFSEGGLD LG
Sbjct: 86  EAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLG 145

Query: 495 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLY 620
           NPNLVHAQSILA+   QVVLMG  EG+RINGL GVG+G +LY
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLY 187


>tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26482 PE=4 SV=1
          Length = 266

 Score =  261 bits (666), Expect = 3e-68
 Identities = 123/160 (76%), Positives = 135/160 (84%)
 Frame = +3

Query: 141 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGLSADPEA 320
           LR+       R++M+ E WYGPDR KYLGPFSAQTPSYL+G FPGDYGWDTAGLSADPEA
Sbjct: 30  LRDIAAAATGRITMSKELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEA 89

Query: 321 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDNLGNP 500
           FA+NRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAGAQIFS+GGLD LGNP
Sbjct: 90  FARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNP 149

Query: 501 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLY 620
           NLVHAQSILA+   QVVLMG  EGYRINGL GVG+G DLY
Sbjct: 150 NLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGDGNDLY 189


>tr|Q39339|Q39339_BRANA LHC II Type III chlorophyll a /b binding
           protein (Fragment) OS=Brassica napus GN=Lhcb3*1 PE=4
           SV=1
          Length = 202

 Score =  260 bits (665), Expect = 4e-68
 Identities = 124/164 (75%), Positives = 136/164 (82%)
 Frame = +3

Query: 129 TKNALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGLSA 308
           T N LR+ V +   + +M ++ WYGPDR KYLGPFS QTPSYL G FPGDYGWDTAGLSA
Sbjct: 25  TFNPLRDAVSLGSPKYTMGNDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSA 84

Query: 309 DPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDN 488
           DPEAFAKNRALEVIH RWAMLGALGCI PEV QK++ V FKE VWFKAG+QIFSEGGLD 
Sbjct: 85  DPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDY 144

Query: 489 LGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLY 620
           LGNPNLVHAQSILA+   QV+LMG  EG+RINGL GVGEG DLY
Sbjct: 145 LGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNDLY 188


>tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding protein
           OS=Medicago falcata GN=CAB PE=2 SV=1
          Length = 266

 Score =  260 bits (665), Expect = 4e-68
 Identities = 125/162 (77%), Positives = 137/162 (84%)
 Frame = +3

Query: 135 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGLSADP 314
           N LR+ V +  +R +M +E WYGPDR KYLGPFSAQTPSYL G FPGDYGWDTAGLSADP
Sbjct: 28  NPLRDVVAMGTSRFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 87

Query: 315 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDNLG 494
           EAFAKNRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAG+QIFSEGGLD LG
Sbjct: 88  EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 147

Query: 495 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLY 620
           NPNLVHAQSILA+   QVVLMG  EG+RINGL GVGEG +LY
Sbjct: 148 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLY 189


>tr|Q6ZF30|Q6ZF30_ORYSJ Os07g0562700 protein OS=Oryza sativa subsp.
           japonica GN=P0406F06.32 PE=2 SV=1
          Length = 266

 Score =  259 bits (663), Expect = 7e-68
 Identities = 122/160 (76%), Positives = 135/160 (84%)
 Frame = +3

Query: 141 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGVFPGDYGWDTAGLSADPEA 320
           +R+       R++M+ E WYGPDR KYLGPFSAQTPSYL+G FPGDYGWDTAGLSADPEA
Sbjct: 30  VRDIAAAATGRITMSKELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEA 89

Query: 321 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDNLGNP 500
           FA+NRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAGAQIFS+GGLD LGNP
Sbjct: 90  FARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNP 149

Query: 501 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLY 620
           NLVHAQSILA+   QVVLMG  EGYRINGL GVG+G DLY
Sbjct: 150 NLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGDGNDLY 189