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NBDC - LSDB Archive
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DK947855
Clone id YMU02A01NGRM0001_G10
Library
Length 560
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRM0001_G10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AGAGCTCCAGATTAGCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCAT
CTCCATAGCCGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTC
AAAGAGCTTCTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCCCCAACCCGCT
CGCCATCTCTAATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAA
GAAGTCCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGT
GGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGT
GTACCGAGAGCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAA
GCTGCCCATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGC
CAAGGAGTATCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCTAAGAGGCAGGTGCA
GGTCTCCGGCTTCCTCGTCC
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 153
Score (bit) 180.0
E-value 5.0e-45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947855|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_G10, 5'
         (560 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   180   5e-45
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   176   5e-44
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   174   2e-43
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   174   2e-43
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   174   2e-43
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   173   6e-43
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   173   6e-43
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   173   6e-43
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   172   8e-43
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   172   8e-43
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   172   1e-42
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   172   1e-42
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   172   1e-42
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   171   2e-42
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   171   2e-42
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   171   2e-42
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   171   2e-42
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   170   4e-42
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   170   4e-42
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   170   4e-42
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   170   4e-42
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   170   5e-42
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   170   5e-42
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   170   5e-42
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   169   7e-42
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   169   9e-42
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   169   9e-42
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   169   1e-41
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   168   1e-41
sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small cha...   168   1e-41

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  180 bits (456), Expect = 5e-45
 Identities = 86/153 (56%), Positives = 107/153 (69%), Gaps = 5/153 (3%)
 Frame = +2

Query: 116 LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKSETLSYLPPLSSE 283
           L+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 284 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 460
            ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V+
Sbjct: 82  ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 461 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 559
           +E+ EC KEYP AFIRV+GFD  RQVQ   F+V
Sbjct: 142 KEVGECKKEYPNAFIRVIGFDNIRQVQCISFIV 174


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  176 bits (447), Expect = 5e-44
 Identities = 86/148 (58%), Positives = 107/148 (72%), Gaps = 5/148 (3%)
 Frame = +2

Query: 128 FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAK 295
           F+ LK+T+ F    K+ N +    SNG RV  M VW P   KK ETLSYLPPLSSEQ+AK
Sbjct: 28  FTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAK 87

Query: 296 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 472
           +VD+++RK   PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC D++ VL+E+ 
Sbjct: 88  EVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELE 147

Query: 473 ECAKEYPEAFIRVLGFDAKRQVQVSGFL 556
           EC K YP AFIR++GFD KRQVQ+  F+
Sbjct: 148 ECKKAYPSAFIRIIGFDNKRQVQIISFI 175


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  174 bits (442), Expect = 2e-43
 Identities = 81/144 (56%), Positives = 100/144 (69%)
 Frame = +2

Query: 125 SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAKQVD 304
           S +    T  FA  S  P   SNG RV  M VW P   KK ETLSYLPPL+ EQ+ ++VD
Sbjct: 31  SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 305 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAK 484
           +++R GW PCIEF K+G VYRE+ +  GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K
Sbjct: 88  YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSK 147

Query: 485 EYPEAFIRVLGFDAKRQVQVSGFL 556
            YP+ F R++GFD  RQVQ   FL
Sbjct: 148 AYPDYFNRIIGFDNTRQVQCISFL 171


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  174 bits (442), Expect = 2e-43
 Identities = 84/147 (57%), Positives = 103/147 (70%), Gaps = 4/147 (2%)
 Frame = +2

Query: 128 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAK 295
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KK ETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 296 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 475
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 476 CAKEYPEAFIRVLGFDAKRQVQVSGFL 556
             K YPE F+R++GFD KRQVQ   F+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFI 172


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  174 bits (442), Expect = 2e-43
 Identities = 84/147 (57%), Positives = 103/147 (70%), Gaps = 4/147 (2%)
 Frame = +2

Query: 128 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAK 295
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KK ETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 296 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 475
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 476 CAKEYPEAFIRVLGFDAKRQVQVSGFL 556
             K YPE F+R++GFD KRQVQ   F+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFI 172


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  173 bits (438), Expect = 6e-43
 Identities = 83/151 (54%), Positives = 109/151 (72%), Gaps = 4/151 (2%)
 Frame = +2

Query: 116 LSKSFSGLKATTLF-APKSPNPLA--ISNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQ 286
           L+  F+GLK++  F   K  N +    SNGSRV+ M VW P   KK ETLSYLPPL+ EQ
Sbjct: 21  LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80

Query: 287 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 463
           + K+V++++RKGW PC+EF+ + G V+R++    GYYDGRYW MW+LP+FG  DAA VL+
Sbjct: 81  LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLK 140

Query: 464 EIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 556
           E+AEC  EYPEAFIR++GFD  RQVQ   F+
Sbjct: 141 EVAECKAEYPEAFIRIIGFDNVRQVQCISFI 171


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  173 bits (438), Expect = 6e-43
 Identities = 83/153 (54%), Positives = 105/153 (68%), Gaps = 8/153 (5%)
 Frame = +2

Query: 125 SFSGLKATTLFAP--KSPNPLA------ISNGSRVSAMLVWKPYDNKKSETLSYLPPLSS 280
           +F+GLK+T  F    K  N  A       SNG RV  M VW P+ N K ETLSYLP L+ 
Sbjct: 15  AFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTE 74

Query: 281 EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 460
           EQ+ K+V++++R  W PC+EFD  GS+ R++    GYYDGRYWVMWKLPMFGC +A+ V+
Sbjct: 75  EQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVI 134

Query: 461 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 559
            E+ ECAK YP+AFIRV+GFD  RQVQ   F+V
Sbjct: 135 NEVRECAKAYPKAFIRVIGFDNVRQVQCISFIV 167


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
          Length = 187

 Score =  173 bits (438), Expect = 6e-43
 Identities = 82/149 (55%), Positives = 102/149 (68%), Gaps = 5/149 (3%)
 Frame = +2

Query: 125 SFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIA 292
           SF+GLK+   F       L I    SNG RV  MLVW P + KK ETLSYLP LS EQ+ 
Sbjct: 25  SFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLL 84

Query: 293 KQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREI 469
           K+++++++KGW PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC DA  VL E+
Sbjct: 85  KEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEV 144

Query: 470 AECAKEYPEAFIRVLGFDAKRQVQVSGFL 556
            E  K YP+A+IR++GFD  RQVQ   F+
Sbjct: 145 QEAKKAYPQAWIRIIGFDNVRQVQCISFI 173


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  172 bits (437), Expect = 8e-43
 Identities = 83/147 (56%), Positives = 105/147 (71%), Gaps = 4/147 (2%)
 Frame = +2

Query: 128 FSGLKATTLF-APKSPNPLAI--SNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAKQ 298
           F+GLK+   F   K  N  +   SNG RV  M VW P   KK ETLSYLPPL+  Q+AK+
Sbjct: 25  FTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKE 84

Query: 299 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 475
           VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC D+A V++E+AE
Sbjct: 85  VDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAE 144

Query: 476 CAKEYPEAFIRVLGFDAKRQVQVSGFL 556
           C KEYP+A+IR++GFD  RQVQ   F+
Sbjct: 145 CKKEYPQAWIRIIGFDNVRQVQCIMFI 171


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  172 bits (437), Expect = 8e-43
 Identities = 81/148 (54%), Positives = 105/148 (70%), Gaps = 5/148 (3%)
 Frame = +2

Query: 128 FSGLKATTLFAP--KSPNPLA--ISNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAK 295
           F+GLK++  F    K+ N +    SNG RV+ M VW P   KK ETLSYLP L+  ++AK
Sbjct: 24  FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 296 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 472
           +VD+++R  W PC+EF+ + G VYREH +  GYYDGRYW MWKLP+FGC D+A VL+E+ 
Sbjct: 84  EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 473 ECAKEYPEAFIRVLGFDAKRQVQVSGFL 556
           EC KEYP AFIR++GFD  RQVQ   F+
Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQVQCISFI 171
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 148
Score (bit) 279.0
E-value 6.0e-74
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947855|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRM0001_G10, 5'
         (560 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   279   6e-74
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   197   3e-49
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   194   3e-48
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   193   5e-48
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   193   6e-48
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   193   6e-48
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   190   4e-47
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   184   3e-45
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   184   4e-45
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   184   4e-45
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   182   1e-44
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   181   2e-44
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   181   3e-44
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   180   5e-44
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   180   5e-44
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   179   1e-43
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   179   1e-43
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   178   2e-43
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...   176   8e-43
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...   176   8e-43
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c...   175   1e-42
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   175   1e-42
tr|A9U377|A9U377_PHYPA Ribulose bisphosphate carboxylase small c...   174   2e-42
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   174   3e-42
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   173   5e-42
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   173   7e-42
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c...   173   7e-42
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   173   7e-42

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  279 bits (714), Expect = 6e-74
 Identities = 130/148 (87%), Positives = 140/148 (94%)
 Frame = +2

Query: 116 LSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAK 295
           LSKSFSGLKA TLFAPK  NPLAISNGSR+SAMLVWKPYDNKK ETLSYLPPL+++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 296 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 475
           QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAE
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141

Query: 476 CAKEYPEAFIRVLGFDAKRQVQVSGFLV 559
           CAKEYP AFIRVLGFDAKRQVQV+GFLV
Sbjct: 142 CAKEYPTAFIRVLGFDAKRQVQVAGFLV 169


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  197 bits (501), Expect = 3e-49
 Identities = 93/149 (62%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAKQV 301
           K FSGLK+TTLFA K+    ++ NGSRV  M VW P    K ET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 472
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 473 ECAKEYPEAFIRVLGFDAKRQVQVSGFLV 559
           EC + +P  ++RVLGFD+K+QVQ+ GFLV
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLV 175


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  194 bits (493), Expect = 3e-48
 Identities = 92/149 (61%), Positives = 111/149 (74%), Gaps = 3/149 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAKQV 301
           K FSGLK+TTL A K+    ++ NGSRV  M VW P    K ET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 472
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 473 ECAKEYPEAFIRVLGFDAKRQVQVSGFLV 559
           EC + +P  ++RVLGFD+K+QVQ+ GFLV
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLV 175


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  193 bits (491), Expect = 5e-48
 Identities = 90/149 (60%), Positives = 110/149 (73%), Gaps = 3/149 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAKQV 301
           K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    K ET SYLPPLS +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 472
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 473 ECAKEYPEAFIRVLGFDAKRQVQVSGFLV 559
           EC   YP  ++RVLGFD+K+QVQ+ GFLV
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFLV 180


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  193 bits (490), Expect = 6e-48
 Identities = 89/149 (59%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAKQV 301
           K+FSGLK+ TLF+ K+    ++ NGSRV  M VW P    K ET SYLPPL+ +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 472
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 473 ECAKEYPEAFIRVLGFDAKRQVQVSGFLV 559
           EC  ++P  ++RVLGFD+K+QVQ+ GFLV
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFLV 210


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  193 bits (490), Expect = 6e-48
 Identities = 90/149 (60%), Positives = 111/149 (74%), Gaps = 3/149 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAKQV 301
           K+FSGLK  TLF+ K+    A+ NGSRV  M VW P    K ET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 472
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 473 ECAKEYPEAFIRVLGFDAKRQVQVSGFLV 559
           EC  ++P  ++RVLGFD+K+QVQ+ GFLV
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLV 180


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  190 bits (483), Expect = 4e-47
 Identities = 87/149 (58%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAKQV 301
           K+FSGLK+ TLF+ ++    ++ NGSRV  M VW P    K ET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 472
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 473 ECAKEYPEAFIRVLGFDAKRQVQVSGFLV 559
           EC  ++P  ++RVLGFD+K+QVQ+ GFLV
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLV 179


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  184 bits (467), Expect = 3e-45
 Identities = 85/146 (58%), Positives = 105/146 (71%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAKQV 301
           K+FSGLK+ T+F+ K+ N  ++ NGSRV  M VW P    K ET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 481
           ++M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD+A VLREI EC 
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 482 KEYPEAFIRVLGFDAKRQVQVSGFLV 559
           K +P  F+RVLGFD  +QVQ+ GFLV
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLV 177


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  184 bits (466), Expect = 4e-45
 Identities = 86/146 (58%), Positives = 105/146 (71%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAKQV 301
           K+FSGLK++TLF+ K+ +  ++ NGSRV  M VW P    K ET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 481
           D+M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD A VLREI EC 
Sbjct: 92  DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151

Query: 482 KEYPEAFIRVLGFDAKRQVQVSGFLV 559
           K +P  F+RVLGFD  +QVQ+ GFLV
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLV 177


>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_123666 PE=3 SV=1
          Length = 181

 Score =  184 bits (466), Expect = 4e-45
 Identities = 86/146 (58%), Positives = 106/146 (72%)
 Frame = +2

Query: 122 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKSETLSYLPPLSSEQIAKQV 301
           K+FSGLK+ TLF+ +S    ++ NGSRV+ M VW P    K ET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 302 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 481
           ++M+++   PC+EFD    V RE+    GYYDGRYW MWKLPMFGCQD+A VLREI EC 
Sbjct: 92  EYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 482 KEYPEAFIRVLGFDAKRQVQVSGFLV 559
           K +P  F+RVLGFD  +QVQ+ GFLV
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLV 177