DK947872 |
Clone id |
YMU02A02NGRM0001_A03 |
Library |
YMU02 |
Length |
622 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A02NGRM0001_A03. 5' end sequence. |
Accession |
DK947872 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL3209Contig1 |
Sequence |
GCACGAGCTCGGAAGAAGGCAGGGGGCATGGCTATGCTGATATCAGAAAGTGAGGATGGC TTGAGCCCTGCCAGAAGCAAAGAACCGGTTAAGCAGGATTACGCTAAGTTGAAGGGTGAT TTGCAAACCCTTACAGCAATCTTTGGAGGTGCTGGTTTAGCTGTCTGTTATACATCGTAT TCATCTGAAGTTGCTCTAAGCTATGGAGTTGGATTACTTGGAGCTCTTGCGTACATTCGA ATGCTAGGGAACAGTGTGGATTCAATGGGGCAGACCAACAGGCAGGGTGCGGTTAGTGCT GCAATAGGACAACCACGGCTTTTGGTGCCTGTAGTTCTTGTAATGGTCTTTAACCGATGG AACGGTGTCATTGCCCCAGAATACAATCTGTTGCATCTGCAATTGATACCTATATTGGTT GGATTCTTTACCTACAAAGCAGCTACAGTGGTGGAGGTATTTAGAGATGCTTTTCAAAGT TCCTCTCAAGAGGACCTGTCATAGCCCTTAGTCAGGAATAATATTTTCTTCATTCCAGAA AAGCGCTTATGTGAGAAGAAAACTCTCAAATTGATTGATAAATAGAGTCATACATCCAAA TGTCTCTCTAGTAAAGAATGTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P12403 |
Definition |
sp|P12403|ATPZ_ANASP ATP synthase protein I OS=Anabaena sp. (strain PCC 7120) |
Align length |
131 |
Score (bit) |
59.7 |
E-value |
1.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T8R3 |
Definition |
tr|A9T8R3|A9T8R3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
158 |
Score (bit) |
154.0 |
E-value |
3.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947872|Adiantum capillus-veneris mRNA, clone: YMU02A02NGRM0001_A03, 5' (622 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T8R3|A9T8R3_PHYPA Predicted protein (Fragment) OS=Physcomit... 154 3e-36 tr|B8LMW2|B8LMW2_PICSI Putative uncharacterized protein OS=Picea... 144 6e-33 tr|B7FI50|B7FI50_MEDTR Putative uncharacterized protein OS=Medic... 143 7e-33 tr|Q8LB58|Q8LB58_ARATH Putative uncharacterized protein OS=Arabi... 135 2e-30 tr|O82279|O82279_ARATH Expressed protein (At2g31040/T16B12.15) O... 135 2e-30 tr|A7PJH4|A7PJH4_VITVI Chromosome chr12 scaffold_18, whole genom... 128 3e-28 tr|A5AH71|A5AH71_VITVI Putative uncharacterized protein OS=Vitis... 128 3e-28 tr|A9PJP5|A9PJP5_POPJC Putative uncharacterized protein OS=Popul... 126 9e-28 tr|B7FKN4|B7FKN4_MEDTR Putative uncharacterized protein OS=Medic... 125 2e-27 tr|A2Z931|A2Z931_ORYSI Putative uncharacterized protein OS=Oryza... 119 1e-25 tr|Q5QMQ3|Q5QMQ3_ORYSJ cDNA clone:J013110J02, full insert sequen... 118 3e-25 tr|A8HNA8|A8HNA8_CHLRE ATP synthase I-like protein OS=Chlamydomo... 102 2e-20 tr|A4S8T9|A4S8T9_OSTLU Predicted protein OS=Ostreococcus lucimar... 70 8e-11 tr|Q3M9V4|Q3M9V4_ANAVT Putative uncharacterized protein OS=Anaba... 62 2e-08 tr|Q00TR8|Q00TR8_OSTTA Homology to unknown gene OS=Ostreococcus ... 62 3e-08 tr|A0YJF6|A0YJF6_9CYAN Putative uncharacterized protein OS=Lyngb... 61 6e-08 tr|A0ZF01|A0ZF01_NODSP Putative uncharacterized protein OS=Nodul... 59 2e-07 tr|Q112Z0|Q112Z0_TRIEI Ptuative ATP synthase protein I OS=Tricho... 57 9e-07 tr|Q31RF7|Q31RF7_SYNE7 Putative uncharacterized protein OS=Synec... 57 1e-06 tr|Q8DLP9|Q8DLP9_THEEB H+-transporting ATP synthase chain OS=The... 55 3e-06 tr|B4WI80|B4WI80_9SYNE Putative uncharacterized protein OS=Synec... 55 3e-06 tr|B4BYV1|B4BYV1_9CHRO ATP synthase protein I OS=Cyanothece sp. ... 54 1e-05 tr|B8HPJ5|B8HPJ5_9CHRO ATP synthase I OS=Cyanothece sp. PCC 7425... 53 1e-05 tr|B5W2X8|B5W2X8_SPIMA Putative ATP synthase protein I OS=Arthro... 53 1e-05 tr|B7K5I2|B7K5I2_SYNP8 ATP synthase I OS=Synechococcus sp. (stra... 52 2e-05 tr|Q10M56|Q10M56_ORYSJ Os03g0322600 protein OS=Oryza sativa subs... 52 3e-05 tr|B8ANE9|B8ANE9_ORYSI Putative uncharacterized protein OS=Oryza... 52 3e-05 tr|A3AHG2|A3AHG2_ORYSJ Putative uncharacterized protein OS=Oryza... 52 3e-05 tr|B7KKS0|B7KKS0_9CHRO ATP synthase I OS=Cyanothece sp. PCC 7424... 52 4e-05 tr|B4VTZ3|B4VTZ3_9CYAN Putative uncharacterized protein OS=Micro... 52 4e-05
>tr|A9T8R3|A9T8R3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_44549 PE=4 SV=1 Length = 313
Score = 154 bits (390), Expect = 3e-36 Identities = 81/158 (51%), Positives = 106/158 (67%), Gaps = 2/158 (1%) Frame = +1
Query: 1 ARARKK-AGGMAMLISESEDGL-SPARSKEPVKQDYAKLKGDLQTLTAIFGGAGLAVCYT 174 ARA K +GG L+ +SE + P +S ++ Y KLK DLQ T GGA L Y Sbjct: 153 ARATKAVSGGSEKLMRDSEKKVVDPVKSAAIARKKYQKLKQDLQITTLAIGGASLVGTYF 212
Query: 175 SYSSEVALSYGVGLLGALAYIRMLGNSVDSMGQTNRQGAVSAAIGQPRXXXXXXXXXXFN 354 SYS+E A+SYG GL+GAL YIRMLGNSVDS+G +N GA+ A+GQPR FN Sbjct: 213 SYSAEAAISYGTGLVGALVYIRMLGNSVDSVGASNAGGAMKGAMGQPRTLVPVLLVMLFN 272
Query: 355 RWNGVIAPEYNLLHLQLIPILVGFFTYKAATVVEVFRD 468 RWN ++ P+++++ L+LIP+LVGFFTYKAAT VE F++ Sbjct: 273 RWNALVVPKFDVIPLELIPMLVGFFTYKAATFVETFKE 310
>tr|B8LMW2|B8LMW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 381
Score = 144 bits (362), Expect = 6e-33 Identities = 80/162 (49%), Positives = 96/162 (59%), Gaps = 2/162 (1%) Frame = +1
Query: 4 RARKKA-GGMAMLISE-SEDGLSPARSKEPVKQDYAKLKGDLQTLTAIFGGAGLAVCYTS 177 RA K A GG +L+ ++ PA KQ Y +LK LQ +T GG G Y S Sbjct: 214 RASKAATGGTGLLLRNLNKSREDPAVIAAQSKQHYIQLKQRLQLITLGLGGLGTVSAYIS 273
Query: 178 YSSEVALSYGVGLLGALAYIRMLGNSVDSMGQTNRQGAVSAAIGQPRXXXXXXXXXXFNR 357 YS EVA S+G GLLG+LAYIRMLGNSVDS G QG V A+GQPR FNR Sbjct: 274 YSPEVAASFGAGLLGSLAYIRMLGNSVDSYGVEGVQGTVRGALGQPRLLVPVVLVMMFNR 333
Query: 358 WNGVIAPEYNLLHLQLIPILVGFFTYKAATVVEVFRDAFQSS 483 WN ++ P++ +HL LIPILVGFFTYK AT V+ D +S Sbjct: 334 WNEILVPDFGFIHLDLIPILVGFFTYKIATFVQAIEDVLPTS 375
>tr|B7FI50|B7FI50_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 224
Score = 143 bits (361), Expect = 7e-33 Identities = 74/168 (44%), Positives = 99/168 (58%), Gaps = 2/168 (1%) Frame = +1
Query: 4 RARKKA--GGMAMLISESEDGLSPARSKEPVKQDYAKLKGDLQTLTAIFGGAGLAVCYTS 177 RA K A G ML + +P ++ Y KLK LQ LT GG GL Y S Sbjct: 52 RAAKAATDGSDVMLRESRKSRENPEVLAAQYREQYIKLKKRLQALTLGIGGVGLVSTYVS 111
Query: 178 YSSEVALSYGVGLLGALAYIRMLGNSVDSMGQTNRQGAVSAAIGQPRXXXXXXXXXXFNR 357 YS E+A S+G G LG+LAYIRMLG+S+DS+ + A+ AIGQPR +NR Sbjct: 112 YSPEIAASFGAGFLGSLAYIRMLGSSMDSLNPNGARAAIKGAIGQPRLLVPVVLVMIYNR 171
Query: 358 WNGVIAPEYNLLHLQLIPILVGFFTYKAATVVEVFRDAFQSSSQEDLS 501 WN ++ PEY ++HL+LIP+LVGFFTYK AT + + +S++DL+ Sbjct: 172 WNAILVPEYGIMHLELIPMLVGFFTYKMATFAQAIEEVITVASKKDLN 219
>tr|Q8LB58|Q8LB58_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 350
Score = 135 bits (340), Expect = 2e-30 Identities = 66/134 (49%), Positives = 85/134 (63%) Frame = +1
Query: 91 KQDYAKLKGDLQTLTAIFGGAGLAVCYTSYSSEVALSYGVGLLGALAYIRMLGNSVDSMG 270 ++ Y KLK +Q LT GG GL Y SY+ E+ALS+G GLLG+LAY+RMLGNSVD+M Sbjct: 206 REQYFKLKNKIQVLTLGIGGVGLVSAYISYTPEIALSFGAGLLGSLAYMRMLGNSVDAMA 265
Query: 271 QTNRQGAVSAAIGQPRXXXXXXXXXXFNRWNGVIAPEYNLLHLQLIPILVGFFTYKAATV 450 R G A QPR FNRWN ++ PEY +HL+LIP+LVGFFTYK AT Sbjct: 266 DGAR-GVAKGAANQPRLLVPVVLVMIFNRWNAILVPEYGFMHLELIPMLVGFFTYKIATF 324
Query: 451 VEVFRDAFQSSSQE 492 + +A ++Q+ Sbjct: 325 FQAIEEAISITTQK 338
>tr|O82279|O82279_ARATH Expressed protein (At2g31040/T16B12.15) OS=Arabidopsis thaliana GN=At2g31040 PE=2 SV=1 Length = 350
Score = 135 bits (340), Expect = 2e-30 Identities = 66/134 (49%), Positives = 85/134 (63%) Frame = +1
Query: 91 KQDYAKLKGDLQTLTAIFGGAGLAVCYTSYSSEVALSYGVGLLGALAYIRMLGNSVDSMG 270 ++ Y KLK +Q LT GG GL Y SY+ E+ALS+G GLLG+LAY+RMLGNSVD+M Sbjct: 206 REQYFKLKNKIQVLTLGIGGVGLVSAYISYTPEIALSFGAGLLGSLAYMRMLGNSVDAMA 265
Query: 271 QTNRQGAVSAAIGQPRXXXXXXXXXXFNRWNGVIAPEYNLLHLQLIPILVGFFTYKAATV 450 R G A QPR FNRWN ++ PEY +HL+LIP+LVGFFTYK AT Sbjct: 266 DGAR-GVAKGAANQPRLLVPVVLVMIFNRWNAILVPEYGFMHLELIPMLVGFFTYKIATF 324
Query: 451 VEVFRDAFQSSSQE 492 + +A ++Q+ Sbjct: 325 FQAIEEAISITTQK 338
>tr|A7PJH4|A7PJH4_VITVI Chromosome chr12 scaffold_18, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018736001 PE=4 SV=1 Length = 338
Score = 128 bits (321), Expect = 3e-28 Identities = 62/127 (48%), Positives = 80/127 (62%) Frame = +1
Query: 91 KQDYAKLKGDLQTLTAIFGGAGLAVCYTSYSSEVALSYGVGLLGALAYIRMLGNSVDSMG 270 ++ Y KLK LQ T GG GL Y SYS E+A S+G G +G+L YIRMLG+SVDSM Sbjct: 202 REQYFKLKKKLQIFTLGLGGVGLVSAYVSYSPEIAASFGAGFIGSLVYIRMLGSSVDSMA 261
Query: 271 QTNRQGAVSAAIGQPRXXXXXXXXXXFNRWNGVIAPEYNLLHLQLIPILVGFFTYKAATV 450 +G + AI QPR +NRWN ++ PE+ +HL+LIP+LVGFFTYK AT Sbjct: 262 D-GAKGLMKGAIAQPRLLVPVALVMIYNRWNEIVVPEFGFMHLELIPMLVGFFTYKVATF 320
Query: 451 VEVFRDA 471 V+ +A Sbjct: 321 VQAIEEA 327
>tr|A5AH71|A5AH71_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018738 PE=4 SV=1 Length = 338
Score = 128 bits (321), Expect = 3e-28 Identities = 62/127 (48%), Positives = 80/127 (62%) Frame = +1
Query: 91 KQDYAKLKGDLQTLTAIFGGAGLAVCYTSYSSEVALSYGVGLLGALAYIRMLGNSVDSMG 270 ++ Y KLK LQ T GG GL Y SYS E+A S+G G +G+L YIRMLG+SVDSM Sbjct: 202 REQYFKLKKKLQIFTLGLGGVGLVSAYVSYSPEIAASFGAGFIGSLVYIRMLGSSVDSMA 261
Query: 271 QTNRQGAVSAAIGQPRXXXXXXXXXXFNRWNGVIAPEYNLLHLQLIPILVGFFTYKAATV 450 +G + AI QPR +NRWN ++ PE+ +HL+LIP+LVGFFTYK AT Sbjct: 262 D-GAKGLMKGAIAQPRLLVPVALVMIYNRWNEIVVPEFGFMHLELIPMLVGFFTYKVATF 320
Query: 451 VEVFRDA 471 V+ +A Sbjct: 321 VQAIEEA 327
>tr|A9PJP5|A9PJP5_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 343
Score = 126 bits (317), Expect = 9e-28 Identities = 61/127 (48%), Positives = 80/127 (62%) Frame = +1
Query: 91 KQDYAKLKGDLQTLTAIFGGAGLAVCYTSYSSEVALSYGVGLLGALAYIRMLGNSVDSMG 270 ++ Y KLK +LQ LT G GL Y SYS E+A S+ G +G+L YIRMLGNSVDS+ Sbjct: 210 REQYFKLKNNLQILTLGIGSVGLVSTYVSYSPEIAASFSAGFIGSLVYIRMLGNSVDSLA 269
Query: 271 QTNRQGAVSAAIGQPRXXXXXXXXXXFNRWNGVIAPEYNLLHLQLIPILVGFFTYKAATV 450 +G V A QPR +NRWNG++ P+Y +HL+LIP+LVGFF+YK AT Sbjct: 270 D-GAKGIVKGAAAQPRLLVPVLLVMIYNRWNGILVPDYGFMHLELIPMLVGFFSYKIATF 328
Query: 451 VEVFRDA 471 V+ +A Sbjct: 329 VQAIDEA 335
>tr|B7FKN4|B7FKN4_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 349
Score = 125 bits (314), Expect = 2e-27 Identities = 65/144 (45%), Positives = 85/144 (59%), Gaps = 2/144 (1%) Frame = +1
Query: 4 RARKKA--GGMAMLISESEDGLSPARSKEPVKQDYAKLKGDLQTLTAIFGGAGLAVCYTS 177 RA K A G ML + +P ++ Y KLK LQ LT GG GL Y S Sbjct: 169 RAAKAATDGSDVMLRESRKSRENPEVLAAQYREQYIKLKKRLQALTLGIGGVGLVSTYVS 228
Query: 178 YSSEVALSYGVGLLGALAYIRMLGNSVDSMGQTNRQGAVSAAIGQPRXXXXXXXXXXFNR 357 YS E+A S+G G LG+LAYIR+LG+S+DS+ + A+ AIGQPR +NR Sbjct: 229 YSPEIAASFGAGFLGSLAYIRILGSSMDSLNPNGARAAIKGAIGQPRLLVPVVLVMIYNR 288
Query: 358 WNGVIAPEYNLLHLQLIPILVGFF 429 WN ++ PEY ++HL+LIP+LVGFF Sbjct: 289 WNAILVPEYGIMHLELIPMLVGFF 312
>tr|A2Z931|A2Z931_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34221 PE=4 SV=1 Length = 364
Score = 119 bits (299), Expect = 1e-25 Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 4/159 (2%) Frame = +1
Query: 7 ARKKAGGMAMLISESEDGLS---PARSKEPVKQDYAKLKGDLQTLTAIFGGAGLAVCYTS 177 A+ GG +++ ES+ + P ++ Y +LK LQ T GG GL Y S Sbjct: 199 AKAATGGSDVILRESKSRVQQGDPEVLAAKSREQYLELKQRLQLFTLGIGGIGLVSAYFS 258
Query: 178 YSSEVALSYGVGLLGALAYIRMLGNSVDSM-GQTNRQGAVSAAIGQPRXXXXXXXXXXFN 354 YS E+A S+G GL+G++ Y+RMLG SVDS+ G T V +A QPR +N Sbjct: 259 YSPEIAASFGAGLIGSVLYLRMLGTSVDSLAGGTGE--TVKSAAAQPRLLIPVALVMMYN 316
Query: 355 RWNGVIAPEYNLLHLQLIPILVGFFTYKAATVVEVFRDA 471 RWN ++ P+Y +HL+LIP+LVGFFTYK AT + +++ Sbjct: 317 RWNEILVPDYGFMHLELIPMLVGFFTYKIATFAQAIQES 355
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