BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947873|Adiantum capillus-veneris mRNA, clone:
YMU02A02NGRM0001_A05, 5'
         (462 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O51578|EX5B_BORBU Exodeoxyribonuclease V beta chain OS=Borrel...    31   3.0  
sp|P00953|SYW_BACST Tryptophanyl-tRNA synthetase OS=Bacillus ste...    30   5.0  

>sp|O51578|EX5B_BORBU Exodeoxyribonuclease V beta chain OS=Borrelia
           burgdorferi GN=recB PE=3 SV=1
          Length = 1169

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = +1

Query: 217 IVLVPQEILGLISTSGEINKEKNLWVDV*DS*LITKPQRINLGKKVGINKSGFV 378
           IVL+ +  + LI+   +I  EKNLW+ + +   ITK Q+I    K  IN  G +
Sbjct: 624 IVLLEKNEITLINAINKITFEKNLWIKIAN---ITKDQKIIEWAKNKINYKGLL 674


>sp|P00953|SYW_BACST Tryptophanyl-tRNA synthetase OS=Bacillus
           stearothermophilus GN=trpS PE=1 SV=1
          Length = 328

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 25/76 (32%), Positives = 39/76 (51%)
 Frame = +2

Query: 230 PKKYLV*FLLPGR*IKKKIYG*TSKIADSSLNLRE*IWERKLE*INPGLSRLLNIYLVER 409
           PK Y+   L   + I+KKI    S + DS   +R   ++++ +   PG+S LLNIY    
Sbjct: 200 PKAYIT-LLDDAKTIEKKI---KSAVTDSEGTIR---YDKEAK---PGISNLLNIYSTLS 249

Query: 410 DPSFQQLGEIYFPKGF 457
             S ++L   Y  KG+
Sbjct: 250 GQSIEELERQYEGKGY 265

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947873|Adiantum capillus-veneris mRNA, clone:
YMU02A02NGRM0001_A05, 5'
         (462 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri...    35   1.9  
tr|Q54CB7|Q54CB7_DICDI Putative uncharacterized protein OS=Dicty...    33   5.4  

>tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio
           shilonii AK1 GN=VSAK1_01567 PE=4 SV=1
          Length = 319

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/50 (32%), Positives = 31/50 (62%)
 Frame = -2

Query: 188 LK*MSDEID*STSNFGEIIRKHIFSAKIKFFLSVNLAEIRSLNYQNHCET 39
           LK +++E+D ST +     ++++F A  +F+L VNL + R++  Q  C +
Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKCSS 283


>tr|Q54CB7|Q54CB7_DICDI Putative uncharacterized protein
           OS=Dictyostelium discoideum GN=DDB_0191758 PE=4 SV=1
          Length = 955

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +1

Query: 238 ILGLISTSGEINKEKNLWVDV*DS*LITKPQRINLGKKVGINKSGFVKIIEHLF 399
           I+G ++ SGE+N E   ++   DS  +T    IN+GK   IN S  +  I   F
Sbjct: 745 IIGTLNVSGELNSENGQFIFTLDS--LTNSTFINIGKNATINNSTLIIRINQYF 796