BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947875|Adiantum capillus-veneris mRNA, clone:
YMU02A02NGRM0001_A07, 5'
         (337 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99088|LDLR2_XENLA Low-density lipoprotein receptor 2 OS=Xeno...    30   3.8  
sp|Q1EHB3|ATS7_RAT A disintegrin and metalloproteinase with thro...    30   4.9  
sp|Q99087|LDLR1_XENLA Low-density lipoprotein receptor 1 OS=Xeno...    29   8.4  

>sp|Q99088|LDLR2_XENLA Low-density lipoprotein receptor 2 OS=Xenopus
           laevis GN=ldlr-B PE=2 SV=1
          Length = 892

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 89  CFDLAGCHRRCCLSYSAHIARMISLTIWQEIL 184
           C D+ G +RR  LS   H+A    LTI+++++
Sbjct: 585 CIDITGENRRTVLSDETHLAHPFGLTIFEDLV 616


>sp|Q1EHB3|ATS7_RAT A disintegrin and metalloproteinase with
            thrombospondin motifs 7 OS=Rattus norvegicus GN=Adamts7
            PE=1 SV=1
          Length = 1595

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 22/74 (29%), Positives = 30/74 (40%)
 Frame = -3

Query: 299  KCTNILLTLASMDSKLCVHKCQLVLYAPLAHTHSSIQKAVSPAKWLN*SFLQCEQSSLDN 120
            KC N    LA  DS LC H+       P A     +   V P++        CE+  L  
Sbjct: 1504 KCVNTQTGLAEEDSDLCSHEAWPESSRPCATEDCEL---VEPSR--------CERDRLPF 1552

Query: 119  TFCDTQRDRSKAKL 78
             FC+T R   + +L
Sbjct: 1553 NFCETLRLLGRCQL 1566


>sp|Q99087|LDLR1_XENLA Low-density lipoprotein receptor 1 OS=Xenopus
           laevis GN=ldlr-A PE=2 SV=1
          Length = 909

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 89  CFDLAGCHRRCCLSYSAHIARMISLTIWQEIL 184
           C D+ G +RR  +S   H+A    LTI+++++
Sbjct: 585 CIDVTGENRRTVISDETHLAHPFGLTIFEDLV 616

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947875|Adiantum capillus-veneris mRNA, clone:
YMU02A02NGRM0001_A07, 5'
         (337 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5DW27|A5DW27_LODEL Putative uncharacterized protein OS=Lodde...    36   1.1  
tr|B6GVT5|B6GVT5_PENCH Putative uncharacterized protein Pc04g000...    34   4.2  
tr|Q1RQ02|Q1RQ02_CIOIN Zinc finger protein OS=Ciona intestinalis...    33   9.3  

>tr|A5DW27|A5DW27_LODEL Putative uncharacterized protein
           OS=Lodderomyces elongisporus GN=LELG_01563 PE=4 SV=1
          Length = 1016

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +2

Query: 20  HRCRDCGLSQCKTRKTHDSLIWLCFDLAGCHRRCCLSYSAHIARMISLTI 169
           H C DCGL +     + +SL+ +C + A CHR    S  +HI ++ SL +
Sbjct: 800 HICVDCGLFELVEWVSINSLVCMCVNCASCHR----SIGSHITKIRSLKL 845


>tr|B6GVT5|B6GVT5_PENCH Putative uncharacterized protein Pc04g00070
           OS=Penicillium chrysogenum Wisconsin 54-1255
           GN=Pc04g00070 PE=4 SV=1
          Length = 205

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 23  RCRDCGLSQCKTRKTHDSLIWLCFDLAGCHRRCCLSY 133
           RC DC +   +TR T D  + + +D+ GCH R    Y
Sbjct: 143 RCCDCTIGPGQTRSTKDHNMEVIWDIRGCHNRGTFQY 179


>tr|Q1RQ02|Q1RQ02_CIOIN Zinc finger protein OS=Ciona intestinalis
           GN=Ci-ArfGAP-6 PE=2 SV=1
          Length = 868

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 26  CRDCGLSQCKTRKTHDSL-IWLCFDLAGCHRRCCLSYSAHIARMISLTIWQ 175
           C DCG  + + R    SL I LC + +GCHR    S   HI+++ SLT+ Q
Sbjct: 445 CADCG--KAEPRWASISLGITLCIECSGCHR----SLGVHISKVRSLTLDQ 489