DK947878
Clone id YMU02A02NGRM0001_A10
Library
Length 213
Definition Adiantum capillus-veneris mRNA. clone: YMU02A02NGRM0001_A10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
AAGTCCTGGAAGAAAAGGGGGGCTTACCTACTAAATATCTGACGTGGCAGAAGGGATCTC
CCAGAGACAAGAAGGGATGATATATTGGAACAAGCAGGGAGGAGAAAGAATTGGGCAAAA
ATGATGAATAGAATAAATTGAAAGAAAAGTGAAAAAAAAAATGGAAAAGGGCAAGAAGGC
CTTGTGAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q86JD9
Definition sp|Q86JD9|Y7784_DICDI Putative uncharacterized protein DDB_G0276327 OS=Dictyostelium discoideum
Align length 36
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947878|Adiantum capillus-veneris mRNA, clone:
YMU02A02NGRM0001_A10, 5'
(186 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q86JD9|Y7784_DICDI Putative uncharacterized protein DDB_G0276... 31 2.2

>sp|Q86JD9|Y7784_DICDI Putative uncharacterized protein DDB_G0276327
OS=Dictyostelium discoideum GN=DDB_G0276327 PE=4 SV=2
Length = 125

Score = 30.8 bits (68), Expect = 2.2
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -1

Query: 114 PILSPPCLFQYIIPSCLWEIPSATSDI**VSPPFLP 7
PI++PP ++ IIPS + PS S I +SPP +P
Sbjct: 60 PIMTPPMMYPPIIPSQPFMGPSMVSPI--MSPPMIP 93


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947878|Adiantum capillus-veneris mRNA, clone:
YMU02A02NGRM0001_A10, 5'
(186 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******