DK947887 |
Clone id |
YMU02A02NGRM0001_B09 |
Library |
YMU02 |
Length |
570 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A02NGRM0001_B09. 5' end sequence. |
Accession |
DK947887 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL15Contig1 |
Sequence |
GCAAGGGAGGAGCCCCAGACTTTCAGCCCACCAAGCTCATGACAAGGCTTACGTACACCC TGGATGAGATTGAAGGTCCTTTGGAGGTAGGTGCTGATGGGACTCTCAAATTTGAGGAGC AAGATGGAATCGACTATGCTGCAGTGACCGTTCAGCTCCCTGGGGGTGAAAGGGTGCCCT TCTTGTTCACCATCAAGCAGCTTGTAGCTACAGGAAAGCCTGATGCCTTCAGTGGACAAT TCTTGGTGCCTTCATACAGAGGTTCTTCCTTCCTTGACCCTAAGGGCCGTGGTGGCTCCC AAGGATATGACAACGCTGTGGCTATTCCTGCTGGAGGTGCTGGTGATGAGGAAGAGCTAG CGAAAGAGAATAACAAGGATACAACCGCTCTTAATGGCAAAATCACATTCAGTGTTGCTA AAACCAACCTTGAAACTGGGGAGATTGGTGGTGTCTTTGAAAGTGTTCAGCCTTCTGATA CTGACCTTGGCTCTAAAGCCCCCAAAGATGTCAAGATTCAGGGTATTTGGTATGCGCAAG TAGAGTAGACGGAGAAAACTTGGGGTCTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P23322 |
Definition |
sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum |
Align length |
181 |
Score (bit) |
305.0 |
E-value |
1.0e-82 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK947887|Adiantum capillus-veneris mRNA, clone: YMU02A02NGRM0001_B09, 5' (570 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chlorop... 305 1e-82 sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chlorop... 305 1e-82 sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chlorop... 303 3e-82 sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chlorop... 302 9e-82 sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloropla... 298 2e-80 sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chlorop... 296 5e-80 sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chlo... 295 1e-79 sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chlo... 288 1e-77 sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chlorop... 267 2e-71 sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer protein 1, chlorop... 246 7e-65 sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1, chlorop... 243 6e-64 sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chlorop... 241 2e-63 sp|P13907|PSBO_ANASP Photosystem II manganese-stabilizing polype... 200 5e-51 sp|P0A431|PSBO_THEEB Photosystem II manganese-stabilizing polype... 187 3e-47 sp|P0A432|PSBO_SYNEN Photosystem II manganese-stabilizing polype... 187 3e-47 sp|Q9R6W6|PSBO_CYAA5 Photosystem II manganese-stabilizing polype... 181 2e-45 sp|P11472|PSBO_SYNE7 Photosystem II manganese-stabilizing polype... 176 9e-44 sp|P10549|PSBO_SYNY3 Photosystem II manganese-stabilizing polype... 174 3e-43 sp|P84989|PSBO_POPEU Oxygen-evolving enhancer protein 1, chlorop... 102 1e-21 sp|P84718|PSBO_PINST Putative oxygen-evolving enhancer protein 1... 53 1e-06 sp|P81665|PSBO_PINPS Oxygen-evolving enhancer protein 1 (Fragmen... 35 0.20 sp|Q6PIF2|SYCE2_HUMAN Synaptonemal complex central element prote... 34 0.45 sp|O36027|WSP1_SCHPO Wiskott-Aldrich syndrome protein homolog 1 ... 32 1.7 sp|Q882P7|Y2578_PSESM UPF0343 protein PSPTO_2578 OS=Pseudomonas ... 32 2.9 sp|Q580R0|CB027_HUMAN Uncharacterized protein C2orf27 OS=Homo sa... 31 3.8 sp|P24506|SY62_DISOM Synaptotagmin-B OS=Discopyge ommata GN=P65-... 31 4.9 sp|Q9P1Z9|K1529_HUMAN Uncharacterized protein KIAA1529 OS=Homo s... 31 4.9 sp|A5DK47|DBP6_PICGU ATP-dependent RNA helicase DBP6 OS=Pichia g... 31 4.9 sp|A0JUI0|GATC_ARTS2 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransf... 30 6.4 sp|Q9XD84|TIBA_ECOLX Adhesin/invasin tibA OS=Escherichia coli GN... 30 8.4
>sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2 Length = 329
Score = 305 bits (781), Expect = 1e-82 Identities = 148/181 (81%), Positives = 163/181 (90%) Frame = +3
Query: 3 KGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPF 182 K APDFQ TKLMTRLTYTLDEIEGP EV DGT+KFEE+DGIDYAAVTVQLPGGERVPF Sbjct: 149 KNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPF 208
Query: 183 LFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELA 362 LFTIKQLVA+GKP++FSG+FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL Sbjct: 209 LFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQ 268
Query: 363 KENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQV 542 KEN K+T +L GKIT SV ++ ETGE+ GVFES+QPSDTDLG+K PKDVKIQGIWYAQ+ Sbjct: 269 KENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQL 328
Query: 543 E 545 E Sbjct: 329 E 329
>sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1 Length = 333
Score = 305 bits (780), Expect = 1e-82 Identities = 148/181 (81%), Positives = 163/181 (90%) Frame = +3
Query: 3 KGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPF 182 K APDFQ TKLMTRLTYTLDEIEGP EV DGT+KFEE+DGIDYAAVTVQLPGGERVPF Sbjct: 152 KNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPF 211
Query: 183 LFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELA 362 LFTIKQLVA+GKP++FS FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL Sbjct: 212 LFTIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQ 271
Query: 363 KENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQV 542 KEN K+T +L GKITF+V K+N +TGE+ GVFES+QPSDTDLG+K PKDVKIQGIWYAQ+ Sbjct: 272 KENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQL 331
Query: 543 E 545 E Sbjct: 332 E 332
>sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1 Length = 329
Score = 303 bits (777), Expect = 3e-82 Identities = 147/181 (81%), Positives = 161/181 (88%) Frame = +3
Query: 3 KGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPF 182 K P+FQ TKLMTRLTYTLDEIEGP EV DGT+KFEE+DGIDYAAVTVQLPGGERVPF Sbjct: 149 KNAPPEFQKTKLMTRLTYTLDEIEGPFEVAPDGTVKFEEKDGIDYAAVTVQLPGGERVPF 208
Query: 183 LFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELA 362 LFT+KQLVATGKP++FSG +LVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL Sbjct: 209 LFTVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELV 268
Query: 363 KENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQV 542 KEN KD ++ GKIT SV K+ ETGE+ GVFES+QPSDTDLGSKAPKDVKIQGIWYAQ+ Sbjct: 269 KENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQL 328
Query: 543 E 545 E Sbjct: 329 E 329
>sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1 Length = 332
Score = 302 bits (773), Expect = 9e-82 Identities = 146/181 (80%), Positives = 163/181 (90%) Frame = +3
Query: 3 KGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPF 182 K PDFQ TKLMTRLTYTLDEIEGP EV +DGT+KFEE+DGIDYAAVTVQLPGGERVPF Sbjct: 152 KNAPPDFQKTKLMTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPF 211
Query: 183 LFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELA 362 LFTIKQLVA+GKP++FSG+FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL Sbjct: 212 LFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQ 271
Query: 363 KENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQV 542 KEN K+T++ GKIT SV ++ ETGE+ GVFES+QPSDTDLG+K PKDVKIQGIWYAQ+ Sbjct: 272 KENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQL 331
Query: 543 E 545 E Sbjct: 332 E 332
>sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1 Length = 329
Score = 298 bits (762), Expect = 2e-80 Identities = 144/175 (82%), Positives = 158/175 (90%) Frame = +3
Query: 21 FQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPFLFTIKQ 200 FQ TKLMTRLTYTLDEIEGP EV ADG++KFEE+DGIDYAAVTVQLPGGERVPFLFTIKQ Sbjct: 154 FQNTKLMTRLTYTLDEIEGPFEVSADGSVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQ 213
Query: 201 LVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKD 380 LVA+GKPD+FSG+FLVPSYRGSSFLDPKGRG S GYDNAVA+PAGG GDEEEL KENNK Sbjct: 214 LVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKENNKS 273
Query: 381 TTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 545 + GKIT SV +T ETGE+ GVFES+QPSDTDLG+KAPKDVKIQG+WYAQ+E Sbjct: 274 AASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLE 328
>sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1 Length = 332
Score = 296 bits (758), Expect = 5e-80 Identities = 142/181 (78%), Positives = 159/181 (87%) Frame = +3
Query: 3 KGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPF 182 K PDFQ TKLMTRLTYTLDEIEGP EV +DGT+KFEE+DGIDYAAVTVQLPGGERVPF Sbjct: 150 KNSGPDFQNTKLMTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPF 209
Query: 183 LFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELA 362 LFTIKQLVA+GKP++FSG FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL Sbjct: 210 LFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQ 269
Query: 363 KENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQV 542 KENNK+ + G IT SV + ETGE+ GVF+S+QPSDTDLG+K PKDVKI+G+WYAQ+ Sbjct: 270 KENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQL 329
Query: 543 E 545 E Sbjct: 330 E 330
>sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1 Length = 331
Score = 295 bits (754), Expect = 1e-79 Identities = 140/181 (77%), Positives = 161/181 (88%) Frame = +3
Query: 3 KGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPF 182 K PDFQ TKLMTRLTYTLDEIEGP EVG+DG++KF+E+DGIDYAAVTVQLPGGERVPF Sbjct: 151 KNAPPDFQNTKLMTRLTYTLDEIEGPFEVGSDGSVKFKEEDGIDYAAVTVQLPGGERVPF 210
Query: 183 LFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELA 362 LFT+KQL A+GKP++FSG+FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL+ Sbjct: 211 LFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELS 270
Query: 363 KENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQV 542 KEN K+T A G+IT + K+ ETGE+ GVFES+QPSDTDLG+K PKDVKIQG+WY Q+ Sbjct: 271 KENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQI 330
Query: 543 E 545 E Sbjct: 331 E 331
>sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2 Length = 332
Score = 288 bits (737), Expect = 1e-77 Identities = 138/181 (76%), Positives = 158/181 (87%) Frame = +3
Query: 3 KGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPF 182 K P+FQ TKLMTRLTYTLDEIEGP EV +DG++ F+E+DGIDYAAVTVQLPGGERVPF Sbjct: 152 KNAPPEFQNTKLMTRLTYTLDEIEGPFEVASDGSVNFKEEDGIDYAAVTVQLPGGERVPF 211
Query: 183 LFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELA 362 LFT+KQL A+GKPD+F+G+FLVPSYRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL Sbjct: 212 LFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELV 271
Query: 363 KENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQV 542 KEN K+T A G+IT V K+ ETGE+ GVFES+QPSDTDLG+K PKDVKIQG+WY Q+ Sbjct: 272 KENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQL 331
Query: 543 E 545 E Sbjct: 332 E 332
>sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1 Length = 325
Score = 267 bits (683), Expect = 2e-71 Identities = 138/181 (76%), Positives = 152/181 (83%) Frame = +3
Query: 3 KGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPF 182 K P FQ TKLMTRLTYTLDE+EGPLEV TLKFEE+DGIDYAAVTVQLPGGERV F Sbjct: 146 KNEPPRFQKTKLMTRLTYTLDEMEGPLEVRRRRTLKFEEKDGIDYAAVTVQLPGGERVAF 205
Query: 183 LFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELA 362 LFT+KQLVATGKP++F FLVPSYRGSSFLDPKGRGGS GYDNA A+P GG GDEEELA Sbjct: 206 LFTVKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELA 264
Query: 363 KENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQV 542 KEN K+ ++ G IT SV K+ ETGE+ GVFESVQPSDTDL +APKDVKIQG+WYAQ+ Sbjct: 265 KENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL--EAPKDVKIQGVWYAQL 322
Query: 543 E 545 E Sbjct: 323 E 323
>sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer protein 1, chloroplastic OS=Volvox carteri GN=PSBO PE=2 SV=1 Length = 293
Score = 246 bits (627), Expect = 7e-65 Identities = 123/180 (68%), Positives = 138/180 (76%) Frame = +3
Query: 3 KGGAPDFQPTKLMTRLTYTLDEIEGPLEVGADGTLKFEEQDGIDYAAVTVQLPGGERVPF 182 KGG +F TKLMTRLTYTLD + G L+VG+DG+ + +E+DGIDYAA TVQLPGGERV F Sbjct: 114 KGGETEFVKTKLMTRLTYTLDAMSGTLKVGSDGSAELKEEDGIDYAATTVQLPGGERVAF 173
Query: 183 LFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELA 362 LFTIKQ G D G F+VPSYRGSSFLDPKGRGGS GYDNAVA+PA D EEL Sbjct: 174 LFTIKQFDGKGTLDNIKGDFVVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELL 231
Query: 363 KENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQV 542 KEN K T AL G FSVAK N TGEI GVFES+QPSDTDLG+K PKD+KI G+WY Q+ Sbjct: 232 KENVKSTKALKGSAVFSVAKVNTATGEIAGVFESIQPSDTDLGAKPPKDIKITGLWYGQL 291
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U1K9 |
Definition |
tr|A9U1K9|A9U1K9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
181 |
Score (bit) |
307.0 |
E-value |
2.0e-82 |
Report |
|