DK947891 [AcEST]

DK947891
Clone id	YMU02A02NGRM0001_C04
Library	YMU02
Length	515
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A02NGRM0001_C04. 5' end sequence.
Accession	DK947891
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	CL1Contig3
Sequence	TATCGTATCGGGTATAGTTTAGTGGTAAAAGTGTGACTCGTCTCGCATTGATTTTGATAG TTGAGGGATCGTATCTCGGCTAAATTAACTGAAAGAAAAAACTTTATCTTAGCAGAAAAT ATGTGTTTTCTTATTATTTCTCCTAAATTAGAGGTAGATTAATCAATCTCGTCACTCATT CATTTCAAGAACTAGAGAAGATAGTGACGAAGCTGAATTGTTTTGGTACCCCAAGAAATA CTTGGTTTAATTTCTACTTCAGGGGAGATAAATAAAGAAAAAAATCTATGGCTAGACGTA TAACATAGTTGACTCATCGTCACTAAACATCATAGAATAGATCTGGAAAAGAGAGTTGGA ATAAATAAGTCCTGGTTTGACTAGATTATTGAACATCTATTTGGTTGAACGGCATCCCTC GTTTCATCAACTAGATGAGATATATTTCCCTAAGGTTCTTTTCCTGAAAAAAAAAAAAAA TAAAGAACGAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK947891\|Adiantum capillus-veneris mRNA, clone: YMU02A02NGRM0001_C04, 5' (466 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A6D2J9
Definition	tr\|A6D2J9\|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1
Align length	50
Score (bit)	36.6
E-value	0.63
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK947891\|Adiantum capillus-veneris mRNA, clone: YMU02A02NGRM0001_C04, 5' (466 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A6D2J9\|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri... 37 0.63 >tr\|A6D2J9\|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1 GN=VSAK1_01567 PE=4 SV=1 Length = 319 Score = 36.6 bits (83), Expect = 0.63 Identities = 16/50 (32%), Positives = 33/50 (66%) Frame = -3 Query: 188 LKMSDEIDSTSNLGEIIRKHIFSAKIKFFLSVNLAEIRSLNYQNQCET 39 LK +++E+D ST ++ ++++F A +F+L VNL + R++ Q +C + Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKCSS 283