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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK947898
Clone id YMU02A02NGRM0001_D02
Library
Length 332
Definition Adiantum capillus-veneris mRNA. clone: YMU02A02NGRM0001_D02. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GCAAGGCCACTACCCTGTTCGCCCCCAAGAGTCCCAACCCGCTCGCCATCTCTAATGGCA
GCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGT
CCTACTTGCCGCCTTTGTTAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAA
AAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCC
ACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCT
GCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id O48550
Definition sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zantedeschia aethiopica
Align length 98
Score (bit) 134.0
E-value 1.0e-31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947898|Adiantum capillus-veneris mRNA, clone:
YMU02A02NGRM0001_D02, 5'
         (303 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   134   1e-31
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   131   9e-31
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   130   2e-30
sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chai...   130   2e-30
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   129   6e-30
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   129   6e-30
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   129   6e-30
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   127   1e-29
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   127   1e-29
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   127   1e-29
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   127   2e-29
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   127   2e-29
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   127   2e-29
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   126   4e-29
sp|P29684|RBS_HEVBR Ribulose bisphosphate carboxylase small chai...   126   4e-29
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   126   4e-29
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   125   5e-29
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   125   5e-29
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   125   7e-29
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   124   1e-28
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   124   1e-28
sp|Q38793|RBS_AEGTA Ribulose bisphosphate carboxylase small chai...   124   1e-28
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   124   1e-28
sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small cha...   124   1e-28
sp|P12468|RBS4_SOYBN Ribulose bisphosphate carboxylase small cha...   124   1e-28
sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain...   124   1e-28
sp|P00869|RBS2_PEA Ribulose bisphosphate carboxylase small chain...   124   1e-28
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha...   124   2e-28
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha...   123   3e-28
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha...   123   3e-28

>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  134 bits (337), Expect = 1e-31
 Identities = 61/98 (62%), Positives = 70/98 (71%)
 Frame = +3

Query: 9   TTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRKGW 188
           T  FA  S  P   SNG RV  M VW P   KKFETLSYLPPL  EQ+ ++VD+++R GW
Sbjct: 38  TRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGW 94

Query: 189 TPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGC 302
            PCIEF K+G VYRE+ +  GYYDGRYW MWKLPMFGC
Sbjct: 95  IPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGC 132


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  131 bits (330), Expect = 9e-31
 Identities = 56/84 (66%), Positives = 67/84 (79%)
 Frame = +3

Query: 51  SNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 230
           +NGSRVS M VW+PY+N KFETLSYLPPL  + +AKQ+D++++ GW PCIEFD  G+V R
Sbjct: 51  TNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTR 110

Query: 231 EHFHGSGYYDGRYWVMWKLPMFGC 302
           E     GYYDGRYW MWKLPMFGC
Sbjct: 111 EGSTMPGYYDGRYWTMWKLPMFGC 134


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  130 bits (328), Expect = 2e-30
 Identities = 54/85 (63%), Positives = 65/85 (76%)
 Frame = +3

Query: 48  ISNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRKGWTPCIEFDKIGSVY 227
           +SNG R+  M VW  Y NKKFETLSYLPPL ++ + KQVD+++R GW PC+EF K+G VY
Sbjct: 39  VSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFSKVGFVY 98

Query: 228 REHFHGSGYYDGRYWVMWKLPMFGC 302
           RE+     YYDGRYW MWKLPMFGC
Sbjct: 99  RENSTSPCYYDGRYWTMWKLPMFGC 123


>sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1
          Length = 168

 Score =  130 bits (327), Expect = 2e-30
 Identities = 59/95 (62%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
 Frame = +3

Query: 21  APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRKGWTPC 197
           A +S   LA +SNG R+  M VW  Y NKKFETLSYLPPL  EQ+ KQVD+++R  W PC
Sbjct: 28  ARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQVDYLLRNNWVPC 87

Query: 198 IEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGC 302
           +EF K G VYRE+     YYDGRYW MWKLPMFGC
Sbjct: 88  LEFSKEGFVYRENSTSPCYYDGRYWTMWKLPMFGC 122


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  129 bits (323), Expect = 6e-30
 Identities = 57/84 (67%), Positives = 63/84 (75%)
 Frame = +3

Query: 51  SNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 230
           SNG RVS M VW P   KKFETLSYLPPL  E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 231 EHFHGSGYYDGRYWVMWKLPMFGC 302
           E+    GYYDGRYW MWKLPMFGC
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGC 133


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  129 bits (323), Expect = 6e-30
 Identities = 57/84 (67%), Positives = 63/84 (75%)
 Frame = +3

Query: 51  SNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 230
           SNG RVS M VW P   KKFETLSYLPPL  E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 231 EHFHGSGYYDGRYWVMWKLPMFGC 302
           E+    GYYDGRYW MWKLPMFGC
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGC 133


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  129 bits (323), Expect = 6e-30
 Identities = 57/84 (67%), Positives = 63/84 (75%)
 Frame = +3

Query: 51  SNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 230
           SNG RVS M VW P   KKFETLSYLPPL  E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 231 EHFHGSGYYDGRYWVMWKLPMFGC 302
           E+    GYYDGRYW MWKLPMFGC
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGC 133


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  127 bits (320), Expect = 1e-29
 Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
 Frame = +3

Query: 51  SNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 227
           SNG RV  M VW P   KKFETLSYLPPL SE +AK+VD+++RK W PC+EF+ + G VY
Sbjct: 53  SNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVY 112

Query: 228 REHFHGSGYYDGRYWVMWKLPMFGC 302
           RE+    GYYDGRYW MWKLPMFGC
Sbjct: 113 RENHRSPGYYDGRYWTMWKLPMFGC 137


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
          Length = 177

 Score =  127 bits (320), Expect = 1e-29
 Identities = 56/84 (66%), Positives = 63/84 (75%)
 Frame = +3

Query: 51  SNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 230
           SNG +VS M VW P   KKFETLSYLPPL  E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 231 EHFHGSGYYDGRYWVMWKLPMFGC 302
           E+    GYYDGRYW MWKLPMFGC
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGC 133


>sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain
           PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2
          Length = 174

 Score =  127 bits (320), Expect = 1e-29
 Identities = 53/86 (61%), Positives = 65/86 (75%)
 Frame = +3

Query: 45  AISNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRKGWTPCIEFDKIGSV 224
           ++SNG R+  M VW     KKFETLSYLPPL +E ++KQVD+++R  W PC+EF K+G V
Sbjct: 37  SVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFV 96

Query: 225 YREHFHGSGYYDGRYWVMWKLPMFGC 302
           +REH    GYYDGRYW MWKLPMFGC
Sbjct: 97  FREHNSSPGYYDGRYWTMWKLPMFGC 122
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 100
Score (bit) 201.0
E-value 1.0e-50
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947898|Adiantum capillus-veneris mRNA, clone:
YMU02A02NGRM0001_D02, 5'
         (303 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   201   1e-50
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   139   9e-32
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   135   8e-31
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   134   2e-30
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   133   4e-30
tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small c...   133   4e-30
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   132   6e-30
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   131   1e-29
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   130   2e-29
tr|O24574|O24574_MAIZE Ribulose bisphosphate carboxylase small c...   130   3e-29
tr|B6RHQ4|B6RHQ4_9POAL Chloroplast ribulose-1,5-bisphosphate car...   130   3e-29
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   129   5e-29
tr|B6RHQ3|B6RHQ3_9POAL Chloroplast ribulose-1,5-bisphosphate car...   129   5e-29
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   129   7e-29
tr|Q9ZP07|Q9ZP07_CICAR Ribulose bisphosphate carboxylase small c...   128   1e-28
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   128   1e-28
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   128   1e-28
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   127   2e-28
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   127   2e-28
tr|Q9ZWG6|Q9ZWG6_HORVU Ribulose bisphosphate carboxylase small c...   127   3e-28
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c...   127   4e-28
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c...   127   4e-28
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c...   127   4e-28
tr|Q9ZWG5|Q9ZWG5_9POAL Ribulose bisphosphate carboxylase small c...   127   4e-28
tr|Q9ZNV1|Q9ZNV1_AEGLO Ribulose bisphosphate carboxylase small c...   127   4e-28
tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c...   127   4e-28
tr|Q9SAX5|Q9SAX5_AEGSP Ribulose bisphosphate carboxylase small c...   127   4e-28
tr|Q9SAX4|Q9SAX4_AEGSP Ribulose bisphosphate carboxylase small c...   127   4e-28

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  201 bits (511), Expect = 1e-50
 Identities = 89/100 (89%), Positives = 95/100 (95%)
 Frame = +3

Query: 3   KATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRK 182
           KA TLFAPK  NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL ++QIAKQV++MVRK
Sbjct: 30  KANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRK 89

Query: 183 GWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGC 302
           GWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC
Sbjct: 90  GWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGC 129


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  139 bits (349), Expect = 9e-32
 Identities = 65/103 (63%), Positives = 75/103 (72%), Gaps = 3/103 (2%)
 Frame = +3

Query: 3   KATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRK 182
           K+TTLFA K+    ++ NGSRV  M VW P    KFET SYLPPL  +QIAKQVDFM+++
Sbjct: 33  KSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQ 92

Query: 183 GWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGC 302
              PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC
Sbjct: 93  NLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGC 135


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  135 bits (341), Expect = 8e-31
 Identities = 64/103 (62%), Positives = 74/103 (71%), Gaps = 3/103 (2%)
 Frame = +3

Query: 3   KATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRK 182
           K+TTL A K+    ++ NGSRV  M VW P    KFET SYLPPL  +QIAKQVDFM+++
Sbjct: 33  KSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQ 92

Query: 183 GWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGC 302
              PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC
Sbjct: 93  NLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGC 135


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  135 bits (339), Expect = 1e-30
 Identities = 62/103 (60%), Positives = 74/103 (71%), Gaps = 3/103 (2%)
 Frame = +3

Query: 3   KATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRK 182
           K+ TLF+ K+    ++ NGSRV  M VW P    KFET SYLPPL  +QIAKQVD+M+++
Sbjct: 68  KSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQ 127

Query: 183 GWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGC 302
              PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC
Sbjct: 128 NLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGC 170


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  135 bits (339), Expect = 1e-30
 Identities = 63/103 (61%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
 Frame = +3

Query: 3   KATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRK 182
           K  TLF+ K+    A+ NGSRV  M VW P    KFET SYLPPL  +QIAKQVD+M+++
Sbjct: 38  KPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQ 97

Query: 183 GWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGC 302
              PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC
Sbjct: 98  NLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGC 140


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  134 bits (337), Expect = 2e-30
 Identities = 54/85 (63%), Positives = 67/85 (78%)
 Frame = +3

Query: 48  ISNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRKGWTPCIEFDKIGSVY 227
           +SNGS+   M  W P +NKKFE LSYLPPL  + IAK++D+M++KGW PC+EFD++GSV 
Sbjct: 41  VSNGSKTFCMKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVR 100

Query: 228 REHFHGSGYYDGRYWVMWKLPMFGC 302
           REH    GYYDGRYW +WKLPMFGC
Sbjct: 101 REHSRMPGYYDGRYWTLWKLPMFGC 125


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  133 bits (335), Expect = 4e-30
 Identities = 61/103 (59%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
 Frame = +3

Query: 3   KATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRK 182
           K+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPL  +QIA+QVD+M+++
Sbjct: 38  KSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQVDYMIQQ 97

Query: 183 GWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGC 302
              PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC
Sbjct: 98  NLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGC 140


>tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_8310 PE=3 SV=1
          Length = 156

 Score =  133 bits (335), Expect = 4e-30
 Identities = 61/103 (59%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
 Frame = +3

Query: 3   KATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRK 182
           K+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPL  +QIA+QVD+M+++
Sbjct: 42  KSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQVDYMIQQ 101

Query: 183 GWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGC 302
              PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC
Sbjct: 102 NLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGC 144


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  132 bits (333), Expect = 6e-30
 Identities = 60/103 (58%), Positives = 74/103 (71%), Gaps = 3/103 (2%)
 Frame = +3

Query: 3   KATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRK 182
           K+ TLF+ ++    ++ NGSRV  M VW P    KFET SYLPPL  ++IAKQVD+M+++
Sbjct: 37  KSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQVDYMIQQ 96

Query: 183 GWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGC 302
              PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC
Sbjct: 97  NLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGC 139


>tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small
           chain OS=Vitis vinifera GN=GSVIVT00031354001 PE=3 SV=1
          Length = 169

 Score =  131 bits (330), Expect = 1e-29
 Identities = 52/85 (61%), Positives = 68/85 (80%)
 Frame = +3

Query: 48  ISNGSRVSAMLVWKPYDNKKFETLSYLPPLLSEQIAKQVDFMVRKGWTPCIEFDKIGSVY 227
           +SNGS+   M  W P +NKKFETLSYLPPL  + IAK++D+M++KGW PC+EFD++G V+
Sbjct: 39  VSNGSKTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVF 98

Query: 228 REHFHGSGYYDGRYWVMWKLPMFGC 302
           R++    GYYDGRYW +WKLPMFGC
Sbjct: 99  RKNSQIPGYYDGRYWTLWKLPMFGC 123