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NBDC - LSDB Archive
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DK947924
Clone id YMU02A02NGRM0001_F11
Library
Length 611
Definition Adiantum capillus-veneris mRNA. clone: YMU02A02NGRM0001_F11. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GCCCTCTCACCCACATAGCACCTACTGCCTTCGCAAGTAGGTTTAGGGTTTCTGCAGTAG
AGCAGCTATGGTGTCCGCCTGCTTCTCTTCAGTTAATGGTTCGCTTGCAGCAGCAGCTGC
CTCCACCACTAGGCCAGAGGGGCGTTTAACCCTGTTGCAGGCTCCCCGCTCCTTGCGGAC
CTTGCGACCGTTCGAGCTTCGCATGCTCTCGCTGTCTGTCCCTCGCAAAGGTCTACACAG
ACATGGATATGGTGTGGTTGGGCAAGCTCATGCAGAGCTTTCTGTGGAAGAAGTTCAAGC
CCTCGATGCCTCCTCAGACGAAGATGAGCGCGAAGAAGGTGACTCTCTTGATAACGGACC
TTCTTTTCGGGACAACGGCCCGCCCTTTGGTGAGTCTGTGGCCAAGCTGTATGTTGGGAA
CCTGCCATGGAGCTGCAACAGCGAAGAACTTGCTGGCGTTTTTCAGAAAGTGGGCAGCGT
AGACATGGTTGAGGTTATTTATGACAAAGAGTCTGGCAGGAGTCGTGGTTTTGGGTTTGT
CACTATGAGCTCTGTAGAGGACTGTAATACTGCCATTGAGAAGCTAGACGGGGCTGATTA
TGCTGGAAGGA
■■Homology search results ■■ -
sp_hit_id P28644
Definition sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea
Align length 82
Score (bit) 88.2
E-value 3.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947924|Adiantum capillus-veneris mRNA, clone:
YMU02A02NGRM0001_F11, 5'
         (611 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=...    88   3e-17
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O...    87   9e-17
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor...    87   9e-17
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=...    86   1e-16
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S...    84   4e-16
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O...    83   1e-15
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=...    82   2e-15
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=...    82   3e-15
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=...    80   6e-15
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=...    79   1e-14
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=...    77   7e-14
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=...    76   1e-13
sp|Q44554|RBPB_ANASP Putative RNA-binding protein rbpB OS=Anabae...    68   4e-11
sp|Q9WX37|RBPE_ANASP Putative RNA-binding protein rbpE OS=Anabae...    67   7e-11
sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=...    65   2e-10
sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=...    65   2e-10
sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=...    65   2e-10
sp|Q57014|RBPA_SYNY3 Putative RNA-binding protein rbpA OS=Synech...    65   3e-10
sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sa...    65   4e-10
sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit...    65   4e-10
sp|Q9H0L4|CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit...    65   4e-10
sp|Q9WX39|RBPF_ANASP Putative RNA-binding protein rbpF OS=Anabae...    64   5e-10
sp|Q44560|RBPA_ANASP Putative RNA-binding protein rbpA OS=Anabae...    64   5e-10
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh...    64   6e-10
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabi...    64   8e-10
sp|Q9P3U1|YKX5_SCHPO Uncharacterized RNA-binding protein C328.05...    63   1e-09
sp|Q5RDA3|CSTF2_PONAB Cleavage stimulation factor 64 kDa subunit...    63   1e-09
sp|P33240|CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit...    63   1e-09
sp|Q8HXM1|CSTF2_BOVIN Cleavage stimulation factor 64 kDa subunit...    63   1e-09
sp|Q8BIQ5|CSTF2_MOUSE Cleavage stimulation factor 64 kDa subunit...    62   2e-09

>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 233

 Score = 88.2 bits (217), Expect = 3e-17
 Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
 Frame = +2

Query: 371 DNGPPFGE--SVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVT 544
           + G  F E    AKL+VGNLP+  +SE+LAG+F   G V++ EVIY++E+ RSRGFGFVT
Sbjct: 43  EGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVT 102

Query: 545 MSSVEDCNTAIEKLDGADYAGR 610
           MS+VE+   A+E L+G D  GR
Sbjct: 103 MSTVEEAEKAVELLNGYDMDGR 124



 Score = 73.9 bits (180), Expect = 6e-13
 Identities = 36/73 (49%), Positives = 46/73 (63%)
 Frame = +2

Query: 392 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 571
           E   ++YVGNLPW  ++  L  +F + G V    V+ D+E+GRSRGFGFVTMSS  + N 
Sbjct: 146 EPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVND 205

Query: 572 AIEKLDGADYAGR 610
           AI  LDG    GR
Sbjct: 206 AIAALDGQTLDGR 218


>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 291

 Score = 86.7 bits (213), Expect = 9e-17
 Identities = 43/77 (55%), Positives = 59/77 (76%)
 Frame = +2

Query: 380 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 559
           P F E + KL+VGNLP+S +S  LAG+F++ G+V+MVEVIYDK +GRSRGFGFVTMS+ E
Sbjct: 81  PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKE 139

Query: 560 DCNTAIEKLDGADYAGR 610
           +   A ++ +G +  GR
Sbjct: 140 EVEAAEQQFNGYEIDGR 156



 Score = 74.3 bits (181), Expect = 5e-13
 Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
 Frame = +2

Query: 368 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 523
           RD    FG        +S  ++YVGNL W  +   L  +F + G+V   +V+YD++SGRS
Sbjct: 188 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 247

Query: 524 RGFGFVTMSSVEDCNTAIEKLDGADYAGR 610
           RGFGFVT SS ++ N AI+ L+G D  GR
Sbjct: 248 RGFGFVTYSSSKEVNDAIDSLNGVDLDGR 276


>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
           chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
           SV=1
          Length = 289

 Score = 86.7 bits (213), Expect = 9e-17
 Identities = 44/85 (51%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
 Frame = +2

Query: 365 FRDNGPPFGESVA---KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFG 535
           F D  PP  +S +   KL+VGNLP++ +S +LA +F+  G+V+MVEVIYDK +GRSRGFG
Sbjct: 76  FADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFG 135

Query: 536 FVTMSSVEDCNTAIEKLDGADYAGR 610
           FVTMSSV +   A ++ +G +  GR
Sbjct: 136 FVTMSSVSEVEAAAQQFNGYELDGR 160



 Score = 73.9 bits (180), Expect = 6e-13
 Identities = 37/86 (43%), Positives = 50/86 (58%)
 Frame = +2

Query: 353 NGPSFRDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGF 532
           +G  +   G     S  ++YVGNL W  +   L  +F + G V    VIYD++SGRS+GF
Sbjct: 188 SGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGF 247

Query: 533 GFVTMSSVEDCNTAIEKLDGADYAGR 610
           GFVT  S ++   AI+ LDGAD  GR
Sbjct: 248 GFVTYDSSQEVQNAIKSLDGADLDGR 273


>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 292

 Score = 86.3 bits (212), Expect = 1e-16
 Identities = 43/77 (55%), Positives = 59/77 (76%)
 Frame = +2

Query: 380 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 559
           P F E + KL+VGNLP+S +S  LAG+F++ G+V++VEVIYDK SGRSRGFGFVTMS+ E
Sbjct: 82  PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140

Query: 560 DCNTAIEKLDGADYAGR 610
           +   A ++ +G +  GR
Sbjct: 141 EVEAAEQQFNGYEIDGR 157



 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
 Frame = +2

Query: 368 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 523
           RD    FG        +S  ++YVGNL W  +   L  +F + G+V   +V+YD++SGRS
Sbjct: 189 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 248

Query: 524 RGFGFVTMSSVEDCNTAIEKLDGADYAGR 610
           RGFGFVT SS ++ N AI+ L+G D  GR
Sbjct: 249 RGFGFVTYSSAKEVNDAIDSLNGIDLDGR 277


>sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic
           OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1
          Length = 260

 Score = 84.3 bits (207), Expect = 4e-16
 Identities = 38/74 (51%), Positives = 54/74 (72%)
 Frame = +2

Query: 389 GESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCN 568
           GE   +LYVGN+P + N++EL  + ++ G++++ EV+YDK SGRSR FGFVTM +VED N
Sbjct: 80  GEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDAN 139

Query: 569 TAIEKLDGADYAGR 610
             IEKL+  +  GR
Sbjct: 140 AVIEKLNDTEIGGR 153



 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 27/75 (36%), Positives = 41/75 (54%)
 Frame = +2

Query: 386 FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDC 565
           F ES  K+Y+GNL  +  +E L   F + G V   +V     + +S GFGFV+ SS E+ 
Sbjct: 179 FVESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEV 238

Query: 566 NTAIEKLDGADYAGR 610
             AI+ L+ +   G+
Sbjct: 239 EAAIQALNNSVLEGQ 253


>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 273

 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 39/69 (56%), Positives = 54/69 (78%)
 Frame = +2

Query: 404 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 583
           K++VGNLP+S +S  LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+   A ++
Sbjct: 88  KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 584 LDGADYAGR 610
            +G +  GR
Sbjct: 148 FNGYELDGR 156



 Score = 80.9 bits (198), Expect = 5e-15
 Identities = 38/73 (52%), Positives = 50/73 (68%)
 Frame = +2

Query: 392 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 571
           +S  ++YVGNL W  + + L  +F + G V   +V+YD++SGRSRGFGFVT SS E+ N 
Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 244

Query: 572 AIEKLDGADYAGR 610
           AIE LDG D  GR
Sbjct: 245 AIESLDGVDLNGR 257


>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1
          Length = 329

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 38/70 (54%), Positives = 55/70 (78%)
 Frame = +2

Query: 401 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 580
           AKL+VGNL +  NS+ LA +F++ G+V++ EVIY++E+ +SRGFGFVTMSSV++  TA+E
Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209

Query: 581 KLDGADYAGR 610
           K +  D  GR
Sbjct: 210 KFNRYDLNGR 219



 Score = 80.5 bits (197), Expect = 6e-15
 Identities = 38/80 (47%), Positives = 51/80 (63%)
 Frame = +2

Query: 371 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 550
           +  P   E   ++YVGNLPW  ++  L  +F + G V    V+YD+E+GRSRGFGFVTMS
Sbjct: 234 ERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMS 293

Query: 551 SVEDCNTAIEKLDGADYAGR 610
            V++ N AI  LDG +  GR
Sbjct: 294 DVDELNEAISALDGQNLEGR 313


>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 279

 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
 Frame = +2

Query: 362 SFRDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 517
           SFR+N    G        +S  ++YVGNL W  + + L  +F + G V   +V+YD++SG
Sbjct: 173 SFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSG 232

Query: 518 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGR 610
           RSRGFGFVT SS E+ N AIE LDG D  GR
Sbjct: 233 RSRGFGFVTYSSAEEVNNAIESLDGVDLNGR 263



 Score = 79.3 bits (194), Expect = 1e-14
 Identities = 38/69 (55%), Positives = 53/69 (76%)
 Frame = +2

Query: 404 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 583
           K++VGNL +S +S  LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+   A ++
Sbjct: 88  KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 584 LDGADYAGR 610
            +G +  GR
Sbjct: 148 FNGYELDGR 156


>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana sylvestris PE=1 SV=1
          Length = 276

 Score = 80.5 bits (197), Expect = 6e-15
 Identities = 39/70 (55%), Positives = 53/70 (75%)
 Frame = +2

Query: 401 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 580
           AKL+VGNLP+  +SE LA +FQ+ G V++ EVIY++E+ RSRGFGFVTMS+VE+ + A+E
Sbjct: 97  AKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVE 156

Query: 581 KLDGADYAGR 610
                D  GR
Sbjct: 157 LYSQYDLNGR 166



 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 36/80 (45%), Positives = 48/80 (60%)
 Frame = +2

Query: 371 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 550
           +  P   +   ++YVGN+PW  +   L  VF + G V    V++D+ESGRSRGFGFVTMS
Sbjct: 181 ERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMS 240

Query: 551 SVEDCNTAIEKLDGADYAGR 610
           S  + + AI  LDG    GR
Sbjct: 241 SEAEMSEAIANLDGQTLDGR 260


>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2
          Length = 342

 Score = 79.3 bits (194), Expect = 1e-14
 Identities = 36/69 (52%), Positives = 53/69 (76%)
 Frame = +2

Query: 404 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 583
           KL+VGNL ++ +S +LA +F+  G+V+MVEVIYDK +GRSRGFGFVTMS+  +   A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159

Query: 584 LDGADYAGR 610
            +G ++ GR
Sbjct: 160 FNGYEFEGR 168



 Score = 73.9 bits (180), Expect = 6e-13
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = +2

Query: 404 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 583
           +LYVGNL W  +   L  +F + G V    VIYD++SGRS+GFGFVT+SS ++   AI  
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317

Query: 584 LDGADYAGR 610
           L+GAD  GR
Sbjct: 318 LNGADLDGR 326
tr_hit_id A5BDH4
Definition tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 69
Score (bit) 104.0
E-value 5.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK947924|Adiantum capillus-veneris mRNA, clone:
YMU02A02NGRM0001_F11, 5'
         (611 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis...   104   5e-21
tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome ...   103   1e-20
tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomit...   100   5e-20
tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea m...    97   1e-18
tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Popul...    96   1e-18
tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseo...    96   2e-18
tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1       93   1e-17
tr|B7FKI6|B7FKI6_MEDTR Putative uncharacterized protein OS=Medic...    92   2e-17
tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subs...    92   2e-17
tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza...    92   2e-17
tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein (Fra...    92   3e-17
tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subs...    91   4e-17
tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella paten...    91   4e-17
tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza...    91   4e-17
tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella paten...    91   5e-17
tr|O04240|O04240_VICFA RNA- or ssDNA-binding protein (Fragment) ...    91   7e-17
tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1       91   7e-17
tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment) OS=Physcomit...    91   7e-17
tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativ...    90   1e-16
tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subs...    90   1e-16
tr|A2XHA8|A2XHA8_ORYSI Putative uncharacterized protein OS=Oryza...    90   1e-16
tr|A7PT43|A7PT43_VITVI Chromosome chr8 scaffold_29, whole genome...    89   2e-16
tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea...    88   3e-16
tr|A9P1T0|A9P1T0_PICSI Putative uncharacterized protein OS=Picea...    88   4e-16
tr|A9NNN9|A9NNN9_PICSI Putative uncharacterized protein OS=Picea...    88   4e-16
tr|Q8L941|Q8L941_ARATH Putative RNA-binding protein OS=Arabidops...    87   1e-15
tr|Q7GA50|Q7GA50_ARATH Putative RNA-binding protein OS=Arabidops...    87   1e-15
tr|Q9ZUJ3|Q9ZUJ3_ARATH T2K10.5 protein (Nucleic acid-binding pro...    85   4e-15
tr|Q41367|Q41367_SPIOL 24 kDa RNA binding protein (Fragment) OS=...    84   5e-15
tr|B0M184|B0M184_MESCR Chloroplast RNA binding protein OS=Mesemb...    84   5e-15

>tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_026573 PE=4 SV=1
          Length = 355

 Score =  104 bits (259), Expect = 5e-21
 Identities = 46/69 (66%), Positives = 57/69 (82%)
 Frame = +2

Query: 404 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 583
           KLY GNLP+SC+S  LAG+ Q  GS ++VEV+YD+++GRSRGF FVTMSSVEDCN  IE 
Sbjct: 67  KLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSSVEDCNAVIEN 126

Query: 584 LDGADYAGR 610
           LDG++Y GR
Sbjct: 127 LDGSEYGGR 135



 Score = 47.0 bits (110), Expect = 9e-04
 Identities = 23/46 (50%), Positives = 30/46 (65%)
 Frame = +2

Query: 380 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 517
           P + E+  KL+VGNL WS  SE L  VFQ+ G+V    V+YD E+G
Sbjct: 150 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETG 195


>tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020349001
           PE=4 SV=1
          Length = 283

 Score =  103 bits (256), Expect = 1e-20
 Identities = 45/69 (65%), Positives = 58/69 (84%)
 Frame = +2

Query: 404 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 583
           KLY GNLP+SC+S +LAG+ Q  GS ++VEV+Y++++GRSRGF FVTMSSVEDCN  IE 
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171

Query: 584 LDGADYAGR 610
           LDG++Y GR
Sbjct: 172 LDGSEYGGR 180



 Score = 77.4 bits (189), Expect = 6e-13
 Identities = 38/77 (49%), Positives = 52/77 (67%)
 Frame = +2

Query: 380 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 559
           P + E+  KL+VGNL WS  SE L  VFQ+ G+V    V+YD E+GRSRG+GFV  S+  
Sbjct: 195 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKA 254

Query: 560 DCNTAIEKLDGADYAGR 610
           + +TA+E L+G +  GR
Sbjct: 255 EMDTALESLNGVELEGR 271


>tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_47163 PE=4 SV=1
          Length = 192

 Score =  100 bits (250), Expect = 5e-20
 Identities = 45/69 (65%), Positives = 56/69 (81%)
 Frame = +2

Query: 404 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 583
           KLY+GNLPW C+S +LAG+ Q+ GSV++VEVIYD+ESGRSRGF FVTM++ ED    IE+
Sbjct: 1   KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60

Query: 584 LDGADYAGR 610
           LDG D  GR
Sbjct: 61  LDGHDVGGR 69



 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 35/69 (50%), Positives = 47/69 (68%)
 Frame = +2

Query: 404 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 583
           K++VGNL W  ++  L  +F   G V    V+YD+ESGRSRGFGFVT S V + + AI+ 
Sbjct: 108 KVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDS 167

Query: 584 LDGADYAGR 610
           LDGA++ GR
Sbjct: 168 LDGAEFDGR 176


>tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 287

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
 Frame = +2

Query: 356 GPSFRDNGPPFGESVA--KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 529
           G S  D+GP    S    KLY GNLP++C+S +LAG+ Q+  S +MVEV+YD+ +GRSRG
Sbjct: 99  GASSDDSGPSVAASTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRG 158

Query: 530 FGFVTMSSVEDCNTAIEKLDGADYAGR 610
           F FVTM++V+DC   I+ LDG+ Y GR
Sbjct: 159 FAFVTMTTVQDCELVIKNLDGSLYGGR 185



 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
 Frame = +2

Query: 362 SFRDNGPP----FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 529
           +F D   P    + E+  KL+VGNL W+  SE L   F + G+V    V+YD E+GRSRG
Sbjct: 190 NFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRG 249

Query: 530 FGFVTMSSVEDCNTAIEKLDGADYAGR 610
           +GFV  S+ E+ + A+  L+G +  GR
Sbjct: 250 YGFVCYSTREEMDEALSSLNGMEMEGR 276


>tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 279

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 43/69 (62%), Positives = 56/69 (81%)
 Frame = +2

Query: 404 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 583
           KLY GNLP++ +S +LAG+ Q+ G+ +MVEV+Y +E+GRSRGF FVTMSS+EDC T IE 
Sbjct: 108 KLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCETVIEN 167

Query: 584 LDGADYAGR 610
           LDG+ Y GR
Sbjct: 168 LDGSQYMGR 176



 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 35/77 (45%), Positives = 51/77 (66%)
 Frame = +2

Query: 380 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 559
           P + E+  KL++GNL WS  SE L   FQ+ G+V    V+YD E+G+SRG+GFV  S+ E
Sbjct: 191 PLYPETEYKLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKE 250

Query: 560 DCNTAIEKLDGADYAGR 610
           +  TA++ L+G +  GR
Sbjct: 251 ELETALQSLNGVELEGR 267


>tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseolus
           vulgaris GN=RNP1 PE=2 SV=1
          Length = 287

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 41/69 (59%), Positives = 55/69 (79%)
 Frame = +2

Query: 404 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 583
           KLY GNLP+S +S +LAG+ Q  GS +++EV+YD+++G+SRGF FVTMS +EDCN  IE 
Sbjct: 114 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 173

Query: 584 LDGADYAGR 610
           LDG +Y GR
Sbjct: 174 LDGKEYLGR 182



 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 34/77 (44%), Positives = 48/77 (62%)
 Frame = +2

Query: 380 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 559
           P + E+  KL+VGNL WS  +E L   FQ+ G+V    V+YD E+GRSRG+GFV  S+ E
Sbjct: 197 PLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCFSTKE 256

Query: 560 DCNTAIEKLDGADYAGR 610
           +   A+  L+  +  GR
Sbjct: 257 EMEAALGALNDVELEGR 273


>tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
          Length = 268

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 44/80 (55%), Positives = 61/80 (76%)
 Frame = +2

Query: 371 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 550
           D    F E + KL+VGNLP+S +S +LAG+F++ GSV+MVEV+YD+ +GRSRGFGFVTMS
Sbjct: 70  DGSEEFSEDL-KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMS 128

Query: 551 SVEDCNTAIEKLDGADYAGR 610
           S E+   A+E+ +G  + GR
Sbjct: 129 SAEEAEAAVEQFNGYAFQGR 148



 Score = 80.1 bits (196), Expect = 9e-14
 Identities = 39/78 (50%), Positives = 50/78 (64%)
 Frame = +2

Query: 377 GPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSV 556
           G  F +S  K+YVGNL W  ++  L  +F + G V   +VIYD++SGRSRGFGFVT  S 
Sbjct: 176 GGGFVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSA 235

Query: 557 EDCNTAIEKLDGADYAGR 610
           ++ N AI  LDG D  GR
Sbjct: 236 QEVNNAISNLDGIDLDGR 253


>tr|B7FKI6|B7FKI6_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 285

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 43/80 (53%), Positives = 60/80 (75%), Gaps = 6/80 (7%)
 Frame = +2

Query: 389 GESVA------KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 550
           GE+VA      KLY GNLP+S +S  LAG+ ++ GS +++EV+YD+++G+SRGF FVTMS
Sbjct: 103 GETVAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMS 162

Query: 551 SVEDCNTAIEKLDGADYAGR 610
            VEDCN  I+ LDG ++ GR
Sbjct: 163 CVEDCNAVIQNLDGKEFMGR 182



 Score = 67.4 bits (163), Expect = 6e-10
 Identities = 31/77 (40%), Positives = 50/77 (64%)
 Frame = +2

Query: 380 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 559
           P + E+  KL+VGNL W+  SE L   FQ+ G+V    V++D E+G+SRG+GFV+ ++  
Sbjct: 197 PLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKS 256

Query: 560 DCNTAIEKLDGADYAGR 610
           + +TA+  +D  +  GR
Sbjct: 257 EMDTALAIMDNVELEGR 273


>tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subsp.
           japonica GN=P0643F09.1 PE=2 SV=1
          Length = 316

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 40/69 (57%), Positives = 55/69 (79%)
 Frame = +2

Query: 404 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 583
           KLY GNLP++C+S +LAG+ Q   + +MVEV+YD+ +GRSRGF FVTMS++EDC   I+ 
Sbjct: 146 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 205

Query: 584 LDGADYAGR 610
           LDG+ Y+GR
Sbjct: 206 LDGSLYSGR 214



 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 36/77 (46%), Positives = 51/77 (66%)
 Frame = +2

Query: 380 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 559
           P + E+  KL+VGNL W+  SE L  +FQK G+V    V+YD E+GRSRG+GFV  S+ E
Sbjct: 229 PLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKE 288

Query: 560 DCNTAIEKLDGADYAGR 610
           + + A+  L+G +  GR
Sbjct: 289 EMDEALSSLNGTELEGR 305


>tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09422 PE=4 SV=1
          Length = 318

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 40/69 (57%), Positives = 55/69 (79%)
 Frame = +2

Query: 404 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 583
           KLY GNLP++C+S +LAG+ Q   + +MVEV+YD+ +GRSRGF FVTMS++EDC   I+ 
Sbjct: 148 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 207

Query: 584 LDGADYAGR 610
           LDG+ Y+GR
Sbjct: 208 LDGSLYSGR 216



 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 36/77 (46%), Positives = 51/77 (66%)
 Frame = +2

Query: 380 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 559
           P + E+  KL+VGNL W+  SE L  +FQK G+V    V+YD E+GRSRG+GFV  S+ E
Sbjct: 231 PLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKE 290

Query: 560 DCNTAIEKLDGADYAGR 610
           + + A+  L+G +  GR
Sbjct: 291 EMDEALSSLNGTELEGR 307