DK947932
Clone id YMU02A02NGRM0001_G09
Library
Length 190
Definition Adiantum capillus-veneris mRNA. clone: YMU02A02NGRM0001_G09. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCTAGGAAGGAGTATTGGGGAACTATTTTATGCTATCCGAATGTTGGGATTGTTTTGCGT
TGACAGTTGGTGATGTGTGCTTGCTTGTGTGGGTGTGAAAGAGCAACAGTTGATTGGGGG
AGTGGTACTTTAAGAAATAAAGAGGTTTTGTTTTAAGCTTAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947932|Adiantum capillus-veneris mRNA, clone:
YMU02A02NGRM0001_G09, 5'
(160 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A4C0E7
Definition tr|A4C0E7|A4C0E7_9FLAO Proton/glutamate symporter OS=Polaribacter irgensii 23-P
Align length 38
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK947932|Adiantum capillus-veneris mRNA, clone:
YMU02A02NGRM0001_G09, 5'
(160 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4C0E7|A4C0E7_9FLAO Proton/glutamate symporter OS=Polaribacte... 34 3.2
tr|A8UM99|A8UM99_9FLAO Proton/glutamate symporter OS=Flavobacter... 33 7.1
tr|A2U271|A2U271_9FLAO C4-dicarboxylate transport protein 2 OS=P... 33 7.1
tr|A9DVS6|A9DVS6_9FLAO Chorismate synthase OS=Kordia algicida OT... 33 9.3

>tr|A4C0E7|A4C0E7_9FLAO Proton/glutamate symporter OS=Polaribacter
irgensii 23-P GN=PI23P_09690 PE=4 SV=1
Length = 442

Score = 34.3 bits (77), Expect = 3.2
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -1

Query: 154 KTKPLYFLKYHSPNQLLLFHTHTSKHTSPTVNAKQSQH 41
K PL+FLK SP QLL F T +S T P + +H
Sbjct: 261 KKSPLWFLKQISPAQLLAFSTSSSAATLPVTMERVEEH 298


>tr|A8UM99|A8UM99_9FLAO Proton/glutamate symporter
OS=Flavobacteriales bacterium ALC-1 GN=FBALC1_08538 PE=4
SV=1
Length = 441

Score = 33.1 bits (74), Expect = 7.1
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1

Query: 154 KTKPLYFLKYHSPNQLLLFHTHTSKHTSPTVNAKQSQH 41
K P +FLK SP QLL F T +S T P + +H
Sbjct: 262 KKNPFWFLKQMSPAQLLAFSTSSSAATLPVTMERVEEH 299


>tr|A2U271|A2U271_9FLAO C4-dicarboxylate transport protein 2
OS=Polaribacter sp. MED152 GN=MED152_02010 PE=4 SV=1
Length = 441

Score = 33.1 bits (74), Expect = 7.1
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1

Query: 154 KTKPLYFLKYHSPNQLLLFHTHTSKHTSPTVNAKQSQH 41
K P++FLK SP QLL F T +S T P + +H
Sbjct: 261 KKSPVWFLKQISPAQLLAFSTSSSAATLPVTMERVEEH 298


>tr|A9DVS6|A9DVS6_9FLAO Chorismate synthase OS=Kordia algicida OT-1
GN=KAOT1_03592 PE=4 SV=1
Length = 482

Score = 32.7 bits (73), Expect = 9.3
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1

Query: 154 KTKPLYFLKYHSPNQLLLFHTHTSKHTSPTVNAKQSQH 41
K P +FLK SP QLL F T +S T P + +H
Sbjct: 302 KKSPFWFLKQISPAQLLAFSTSSSAATLPVTMERVEEH 339