BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959596|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_C04, 5'
         (697 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9BQ66|KR412_HUMAN Keratin-associated protein 4-12 OS=Homo sa...    32   4.3  
sp|P48980|BGAL_SOLLC Beta-galactosidase OS=Solanum lycopersicum ...    32   4.3  
sp|Q24266|BTD_DROME Transcription factor btd OS=Drosophila melan...    31   5.5  
sp|Q0KL01|UBX2B_MOUSE UBX domain-containing protein 2B OS=Mus mu...    31   7.2  
sp|O15015|ZN646_HUMAN Zinc finger protein 646 OS=Homo sapiens GN...    30   9.5  

>sp|Q9BQ66|KR412_HUMAN Keratin-associated protein 4-12 OS=Homo
           sapiens GN=KRTAP4-12 PE=2 SV=1
          Length = 201

 Score = 31.6 bits (70), Expect = 4.3
 Identities = 27/90 (30%), Positives = 31/90 (34%), Gaps = 7/90 (7%)
 Frame = +1

Query: 421 QIGCIRNACWSLWCLVEACTARPS*C------PRCSLHRPSFLPC*CRIREPSHLSIFVH 582
           Q  C R  C    C V +C  RP  C      P C   RPS     C        S  V 
Sbjct: 67  QTTCCRTTCCRPSCCVSSC-CRPQCCQSVCCQPTCC--RPSCCQTTCCRTTCCRPSCCVS 123

Query: 583 RRVHPGFPQ-MCFSSPCCRAGHCVLAKSCP 669
               P   Q +C    CCR   C+ +  CP
Sbjct: 124 SCCRPQCCQSVCCQPTCCRPSCCISSSCCP 153


>sp|P48980|BGAL_SOLLC Beta-galactosidase OS=Solanum lycopersicum
           PE=1 SV=1
          Length = 835

 Score = 31.6 bits (70), Expect = 4.3
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 422 KSDAFETLVGLCGALSKLAPHAPR--DALVVAYIGQASCLVDVASESLRTSP 571
           K  +F T  G+CG   + + HAPR  DA     +G+ SC V V  E+    P
Sbjct: 769 KFASFGTPEGVCGNFQQGSCHAPRSYDAFKKNCVGKESCSVQVTPENFGGDP 820


>sp|Q24266|BTD_DROME Transcription factor btd OS=Drosophila
           melanogaster GN=btd PE=1 SV=1
          Length = 644

 Score = 31.2 bits (69), Expect = 5.5
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
 Frame = -3

Query: 632 QHGEEKHICGNPGCTLLCTKMERCEGSLMRHQQGKKLGLCRLQRGHHEGRAVQASTRHHR 453
           + G ++HIC  PGC  L  K    +  L  H  G++  LC L  G    R+ +       
Sbjct: 327 ERGRKQHICHIPGCERLYGKASHLKTHLRWH-TGERPFLC-LTCGKRFSRSDEL------ 378

Query: 452 DQQAFRMHPICRASAC*IRSER-RQQMHLQRHGMRCQRVGFR*RRPKK 312
            Q+  R H   R  AC I S++  +  HL +H    ++  F+ ++ KK
Sbjct: 379 -QRHGRTHTNYRPYACPICSKKFSRSDHLSKH----KKTHFKDKKSKK 421


>sp|Q0KL01|UBX2B_MOUSE UBX domain-containing protein 2B OS=Mus
           musculus GN=Ubxn2b PE=1 SV=2
          Length = 331

 Score = 30.8 bits (68), Expect = 7.2
 Identities = 20/60 (33%), Positives = 28/60 (46%)
 Frame = -3

Query: 209 GLRAEDGWRQGSCKRPLSEQKRWRPPELAGKELALPEAWKCERRAQAFSPARSPPRNTRS 30
           G RAE   ++    RP       RPP     +LAL E ++ E + ++  P RS P   RS
Sbjct: 4   GGRAEPEEQERGSSRP-------RPPSARDLQLALAELYEDEMKCKSSKPDRSTPATCRS 56


>sp|O15015|ZN646_HUMAN Zinc finger protein 646 OS=Homo sapiens
            GN=ZNF646 PE=2 SV=1
          Length = 1829

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
 Frame = -3

Query: 584  LCTKMERCEGSLMRHQQGKKLGLCRLQ---RGHHEGRAVQASTRHHRDQQAFRMHPICRA 414
            +C +  +  GSL+ H+Q  + G    Q   +G     +++   R H D + FR     +A
Sbjct: 1207 VCGRSYKHAGSLINHRQSHQTGHFGCQACSKGFSNLMSLKNHRRIHADPRRFRCSECGKA 1266

Query: 413  SAC*IRSERRQQMHLQRHGMRCQRVGFR*RRPKKGG 306
                 +    Q++H++R G    R   R  RP + G
Sbjct: 1267 FRLRKQLASHQRVHMERRGGGGTRKATREDRPFRCG 1302

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959596|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_C04, 5'
         (697 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4KVG8|B4KVG8_DROMO GI13213 OS=Drosophila mojavensis GN=GI132...    35   6.0  
tr|Q4QAQ9|Q4QAQ9_LEIMA Putative uncharacterized protein OS=Leish...    35   6.0  
tr|Q0AIB5|Q0AIB5_NITEC Electron transport complex, RnfABCDGE typ...    34   7.9  

>tr|B4KVG8|B4KVG8_DROMO GI13213 OS=Drosophila mojavensis GN=GI13213
           PE=4 SV=1
          Length = 425

 Score = 34.7 bits (78), Expect = 6.0
 Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 15/126 (11%)
 Frame = -3

Query: 692 RCDLATAQGQDFARTQWPALQHGEEKHICGNPGC-------TLLCTKMERCEGSLMRHQQ 534
           +C++  AQ  +  R Q  + +HG+  + C  PGC         L   M +C      H+ 
Sbjct: 164 KCNICAAQFLNEKRLQSHSRRHGQMPYPCTEPGCGHGYSHKHTLSLHMRKCHKLGKEHKS 223

Query: 533 ------GKKLGLCRLQRGHHEGRAVQASTRHHRDQQAFRMHPICRASAC*IRSERRQ--Q 378
                 GK  G   L + H         T   + QQ F     C  S+C  R   +Q  +
Sbjct: 224 HVCEFCGKVFGTMALLKNHR-------FTHKDKLQQPF----ACEESSCERRFATKQLLK 272

Query: 377 MHLQRH 360
           +H+ RH
Sbjct: 273 IHMMRH 278


>tr|Q4QAQ9|Q4QAQ9_LEIMA Putative uncharacterized protein OS=Leishmania
            major GN=LmjF24.0740 PE=4 SV=1
          Length = 1074

 Score = 34.7 bits (78), Expect = 6.0
 Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
 Frame = -1

Query: 640  LLCNMEKRNTSVEILGALFYARRWRGAKAL*CDINKARSLAY--VGYNEGITRGVRCKLR 467
            L+ N E+R      +  LF +  W+ A+A  CD++ A S      G N G TR V  K+ 
Sbjct: 855  LIANEERRQHRPPRVEPLFASETWKAARAT-CDVSAAMSPTNHGAGDNHGDTRDVARKVA 913

Query: 466  QGTTETNKRFECIRFAELLLVRSAARGDSRCICNDTG 356
              T    +  EC R    LL       D +C  ND G
Sbjct: 914  GATNSPPEMPECHRGTPHLL-------DKKC-SNDCG 942


>tr|Q0AIB5|Q0AIB5_NITEC Electron transport complex, RnfABCDGE type,
           B subunit OS=Nitrosomonas eutropha (strain C91)
           GN=Neut_0645 PE=4 SV=1
          Length = 218

 Score = 34.3 bits (77), Expect = 7.9
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +2

Query: 503 VVAYIGQASCLVDVASESLRTSPSSCIEECTQDFHRCVSLLHVAEQATASLQNPVLELLR 682
           V A IG A C+  V + +L T    CI  C  D   C+S++ V+E AT  ++  + +  R
Sbjct: 99  VDAIIGAAKCMHTVLT-ALCTGCERCIAPCPVD---CISMVPVSEPATPEIRQQIADSAR 154

Query: 683 DR 688
           +R
Sbjct: 155 ER 156