BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962322|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_I24, 5'
         (601 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P48980|BGAL_SOLLC Beta-galactosidase OS=Solanum lycopersicum ...    32   3.2  
sp|Q0KL01|UBX2B_MOUSE UBX domain-containing protein 2B OS=Mus mu...    31   5.5  
sp|O15015|ZN646_HUMAN Zinc finger protein 646 OS=Homo sapiens GN...    30   7.2  

>sp|P48980|BGAL_SOLLC Beta-galactosidase OS=Solanum lycopersicum
           PE=1 SV=1
          Length = 835

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +3

Query: 435 KSDAFETLVGLCGALSKLAPHAPR--DALVVAYIGQASCLVDVASESLRTSP 584
           K  +F T  G+CG   + + HAPR  DA     +G+ SC V V  E+    P
Sbjct: 769 KFASFGTPEGVCGNFQQGSCHAPRSYDAFKKNCVGKESCSVQVTPENFGGDP 820


>sp|Q0KL01|UBX2B_MOUSE UBX domain-containing protein 2B OS=Mus
           musculus GN=Ubxn2b PE=1 SV=2
          Length = 331

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 20/60 (33%), Positives = 28/60 (46%)
 Frame = -2

Query: 222 GLRAEDGWRQGSCKRPLSEQKRWRPPELAGKELALPEAWKCERRAQAFSPARSPPRNTRS 43
           G RAE   ++    RP       RPP     +LAL E ++ E + ++  P RS P   RS
Sbjct: 4   GGRAEPEEQERGSSRP-------RPPSARDLQLALAELYEDEMKCKSSKPDRSTPATCRS 56


>sp|O15015|ZN646_HUMAN Zinc finger protein 646 OS=Homo sapiens
            GN=ZNF646 PE=2 SV=1
          Length = 1829

 Score = 30.4 bits (67), Expect = 7.2
 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
 Frame = -2

Query: 597  LCTKMERCEGSLMRHQQGKKLGLCRLQ---RGHHEGRAVQASTRHHRDQQAFRMHPICRA 427
            +C +  +  GSL+ H+Q  + G    Q   +G     +++   R H D + FR     +A
Sbjct: 1207 VCGRSYKHAGSLINHRQSHQTGHFGCQACSKGFSNLMSLKNHRRIHADPRRFRCSECGKA 1266

Query: 426  SAC*IRSERRQQMHLQRHGMRCQRVGFR*RRPKKGG 319
                 +    Q++H++R G    R   R  RP + G
Sbjct: 1267 FRLRKQLASHQRVHMERRGGGGTRKATREDRPFRCG 1302

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962322|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_I24, 5'
         (601 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8KZD8|A8KZD8_FRASN Transcriptional regulator, XRE family OS=...    33   9.6  
tr|Q6ZAD5|Q6ZAD5_ORYSJ Splicing coactivator subunit-like OS=Oryz...    33   9.8  

>tr|A8KZD8|A8KZD8_FRASN Transcriptional regulator, XRE family
           OS=Frankia sp. (strain EAN1pec) GN=Franean1_5136 PE=4
           SV=1
          Length = 488

 Score = 33.5 bits (75), Expect = 9.6
 Identities = 23/82 (28%), Positives = 36/82 (43%)
 Frame = -3

Query: 539 SLAYVGYNEGITRGVRCKLRQGTTETNKRFECIRFAELLLVRSAARGDSRCICNDTGCDV 360
           S+ + G   G+T  + CK  +G  + + R++  R    L  RS+A               
Sbjct: 59  SVIHEGREAGVTGNMICKWEKGDKKPSLRYQ--RLLRALFERSSA--------------- 101

Query: 359 RELGFDEDDPRRGAPGEETMAE 294
            ELGF +DDP  G P   + A+
Sbjct: 102 -ELGFVDDDPNTGLPAHASGAD 122


>tr|Q6ZAD5|Q6ZAD5_ORYSJ Splicing coactivator subunit-like OS=Oryza
           sativa subsp. japonica GN=P0410E02.18 PE=4 SV=1
          Length = 170

 Score = 33.5 bits (75), Expect = 9.8
 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
 Frame = -2

Query: 546 GKKLGLCRLQRGHHEGRAVQASTRHHRDQQAFRMHPICRASAC*IRSE-----RRQQMHL 382
           G + G    +RG  +G   + ST H R   A R  P  R +A  + S      RR     
Sbjct: 6   GHRHGGAAAERGEGKGEKRRRSTAHPRSTAAQRRRPERREAAARLGSTGSTAFRRSATET 65

Query: 381 QRHGMRCQRVGFR*RRPKKGGSWRG 307
           +R   R  R+    RR ++GGSW G
Sbjct: 66  ER-WTRSARMRRTQRRRRRGGSWSG 89