DK946111
Clone id YMU02A01NGRL0011_H23
Library
Length 238
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_H23. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TGCTGGGGTGGTTTGTGCCGAAATGCTGAGACACTTCAATGTGGTATTGGATTATGCAAA
TGGTCGCATGGCTTTCGTAGATCAGAGATTCAGGAGGAGACCGTCAAGATATTAAATTAA
TGGCCAGCTGTGATTCTTGCATATTGATGTAGTAATGGAAGGCCCCTCTTGTTTAATGTT
TATAGTAGGGGCCTGTATCTTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9UL01
Definition sp|Q9UL01|DSE_HUMAN Dermatan-sulfate epimerase OS=Homo sapiens
Align length 45
Score (bit) 28.9
E-value 8.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946111|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_H23, 5'
(203 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9UL01|DSE_HUMAN Dermatan-sulfate epimerase OS=Homo sapiens G... 29 8.4

>sp|Q9UL01|DSE_HUMAN Dermatan-sulfate epimerase OS=Homo sapiens
GN=DSE PE=1 SV=1
Length = 958

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2

Query: 142 MQESQLAINLIS*RSPPESLIYESHATICIIQYHIEVSQHFGTNH 8
M++S + + ++ S E + Y S+ T + QY V +HF NH
Sbjct: 240 MEKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFNINH 284


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK946111|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_H23, 5'
(203 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******